Basic Information

Insect: Acromyrmex echinatior
Gene Symbol: -
Assembly: GCA_000204515.1
Location: NW:200176-232523[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.7 1.6e+02 2.3 0.3 2 17 204 219 203 220 0.87

2 14 0.019 1.1 9.1 4.6 1 23 237 260 237 260 0.92

3 14 0.0063 0.38 10.6 1.1 1 23 619 642 619 642 0.94

4 14 0.56 34 4.5 0.7 5 23 649 668 648 668 0.94

5 14 0.27 16 5.5 0.8 2 23 674 695 673 695 0.97

6 14 1.5e-05 0.00093 18.8 0.1 1 21 875 895 875 896 0.96

7 14 0.00025 0.015 15.0 0.1 2 23 903 925 902 925 0.92

8 14 0.33 20 5.2 7.0 1 23 935 958 935 958 0.94

9 14 0.21 13 5.8 0.2 2 21 985 1004 984 1005 0.91

10 14 0.85 51 3.9 6.9 1 22 1046 1067 1046 1069 0.88

11 14 0.046 2.8 7.9 7.1 1 23 1141 1164 1141 1164 0.96

12 14 0.0019 0.12 12.2 0.6 1 23 1234 1257 1234 1257 0.93

13 14 0.24 15 5.6 0.4 1 23 1520 1543 1520 1543 0.95

14 14 0.0089 0.54 10.1 1.5 2 23 1570 1592 1569 1592 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.7	1.6e+02	2.3	0.3	2	17	204	219	203	220	0.87
2	14	0.019	1.1	9.1	4.6	1	23	237	260	237	260	0.92
3	14	0.0063	0.38	10.6	1.1	1	23	619	642	619	642	0.94
4	14	0.56	34	4.5	0.7	5	23	649	668	648	668	0.94
5	14	0.27	16	5.5	0.8	2	23	674	695	673	695	0.97
6	14	1.5e-05	0.00093	18.8	0.1	1	21	875	895	875	896	0.96
7	14	0.00025	0.015	15.0	0.1	2	23	903	925	902	925	0.92
8	14	0.33	20	5.2	7.0	1	23	935	958	935	958	0.94
9	14	0.21	13	5.8	0.2	2	21	985	1004	984	1005	0.91
10	14	0.85	51	3.9	6.9	1	22	1046	1067	1046	1069	0.88
11	14	0.046	2.8	7.9	7.1	1	23	1141	1164	1141	1164	0.96
12	14	0.0019	0.12	12.2	0.6	1	23	1234	1257	1234	1257	0.93
13	14	0.24	15	5.6	0.4	1	23	1520	1543	1520	1543	0.95
14	14	0.0089	0.54	10.1	1.5	2	23	1570	1592	1569	1592	0.95

Sequence Information

Coding Sequence: ATGGCTCGAGTTCAACCGTATGAAAGAGTTGTGAACGCTGTAATCATACATACGAATCCAACActtGGTATAGAAATCCAAAATGGGACGAAGATTAAAGAAGAACCTATCGATACAACTTCGAATACTGATACAACTGAATATGATACTCCTATagttagaaattattatagtttaattgATCATGATCATCATTATTGCGACAAATCATTATCTAATAAGTCATGTAAAAGCATAAATAATCCAGAAAACAGACATTCATCGAATGATCATAATGTATATTCAAACGACGTAACTAATATTGCTAATACAgatcgtaaaaatgtaaaaacaaagaaagaaatagataaTACCTTACCACGTTTTAAGAAACGAAAATATTCCAATGAAATCTTTAGTAATAAAAACACTAGTGCATTATGTTCAGTAACCAAAAATGttaagagaaaaaggaaacaaaaaaGCATTACATtagactataaaaaaaaaatacaatgtaagaataaattaataaaaaaggggTTTACATGTGACATATGTTTTAGGAAATTCAGTTGTCTTTCACATTCGAAAATCcataaacaatattacgaacttgataaaaataataagtgcagggtttgtaataaatatttcatagctAACGACAAATTACAGTCTGATACATGTCATTGCGTTCATAGCATGCGTAGTACTTACTTATCttcatataattgtaatttttgcagTCGtagttttaagaaaaaattgcttttacaATCCCACTTATTTCATGTacataatgaattaatatgttttaatgacACTGTTAAACGTGAGATTTCCAAATCCAAGATCTTTAATGTAAATACATCTTCTGAAGATGATATTTTAAGAACtagtaaaaattcattatgttCAAATAATCTTGTTCAATCAGAAAAGATAGATACTCTTATAAACGTAAATAAATCTCGTAACGATGATGTGATTAATATTGAGAAATCAAGAAccgaaaaattattcaataatgaagTGTCGCCAACTAAAAGATTACGGCAACCAACATTAACGGAATATCTTGAGCTTTGCAAAAAGAAacgcaatattaaatttagtccAAATAAATTGAACATTACAAAAGATGATTTTCCTACGTGTGCTTTACGTCATGATGATCAAATAGAAAAACTTCCAGAAGAACAAAATGGACAAATTGATCCTTTATCTACACAATCAGATAATCTTCTAAAACGAACAGTACGTTCTATTCAGaaacaaaatatgaaacatgAAATGCATAAAAAGCCATTTGTAAAACTACATGCAGATGTTGAAATGATGAAGTCTTTTCTGGAAAAACTTTCTGATACGGTTGTCGAAGATAAAATAACCGAAGATGGaacaagtaatattatttcatatgatCGTGGAATACCTTACAGTTTACGATCTTTAAATGGAGTCTCTTCCGGGGAAGCAAGTTCAAATTTAGGAATGAGGGAGAACAAAAGTGTATCTAAGAAGTCTCGATTTGGtacagaatttaatattaaaaataaaggaaacgGAATTGATTTAGAAAAGATAACTTCTAAAGTGgattggaaaattattatgactcattttaaatgcaaggagtgtacaatttttttaacaagatgTGATGAACAACCAAGAAATTCTTATCAAATTTCTGCTTTTAAAGCCAAGAAAAATACTTGTCTTACTCCTGGATACAATTGTCAAGAAAGTGATGTACGAAATGAAGTAAAGCTAAAAGACGTAGAGGTTTCTTTGGAACGTTTAACAGTTGTTCCAActgtacatataaaagaaaaaacaccAGATGTCGAGAaacataataacaattattttttgtgtaaagTTTGTAAGGAGagtttttcttcaaaattggCCAAACGTATACATATTAAGTCGTCTCATATAGCATATATGTCAAGCATATGTGGTGCACGTTATAAATTGAAGCATAAATTACTTCAGCATTATCTACGCGAACATGTTTCTAAACAAAATCAATGTTGTATttgttatatgttattatctGATTATGAAGCATTGAAGCAACACTTAAATGTTCATTGTCTGAAGTATATTCAACGACAGGATGAccaatatttaatagatactGAATTAGAATGCAACTTGactaaaaaatctaaatatctTCGTGACGAGACATTCTTTTCACGGACATCTTTGAAAGAACATCAAAATCATTGTATGgtacaaaaagaaatagaagaagatCAGAAAGATTCCATGGAAGAAACAAATTCATCCCCGAAGGATATTCCTGAAGTACAGCACGAGAAGACCGATGATATAGTTGACATAACATGTCacgaaaatattaatctgGATGATTTATGTAATCCATTAAATAGTGACtgtgtaaaaaaatcgaatgaaCATCAAACATCgcttcataataaaaaagaacaagaaattaatgaagCTGATCAAAACATTcttgttaataataacttaattaagGAGGAAATAGGAACTATTAACGAATCGCAACATCCTAAAAAgcttttggaaaataattccACAATTAATAATCAAGATGTCGCGAATAcacaattgaataatattgccACAAAGAATGGAACTTATCCCTGCGATATATGTGGAAAGCAATTTCAAACTCCCAAGAATTTGGAAATACATGTACGCAATTTTAGTTTTACCTCCGATGTTTGTCCATTGTGTGGCACTGGATTTAGTTCTAAACGTTTTTTACAATCACATATCACTGCAGCACATGTACCACATATTTCAAAAACTTACAATTTTCATTGCGTATTCTGTAATCaaggtttttttaaaaaacacgaTCTTCGGTCTCATATATTACACTTACACGATCAACAAGTACTCAATACGCTCACATGCAATCCTAATAATCAAGAGAAATCCAATGAATCAGTTACTCATAGCACAGTATGTAACGTTTGTAATTTGGTATTTGAAACTCATGATCGCTATGTTGAGCATCGAAtgtactattataaaaatcatacattTAGGTGCTCACTCTGTGAACAAAACTTTCAAGGAATGTACATGTTTCATCATCATAACAAACTTACACATTGTCCAGAAGATAAACGCAAATCATACAATCACATCTGCGAGGTATGCCATGAGGGATTCAATCATGAGTCACATTTTTATTCGCATAATATACATGTGCATTCGAATGAAGTGAATTTAGGTGAGACTACAAAAGAATCTGAAGATACCAAGAATAGAAGCCGGAATTCATCCAACGTCCAGAAACAGATTAGAAATTGTTCCATGGatcaagaaaaacaaaatgaacaaTCCAATGAGTATATTTGCCAAATCTGTCAGATGAAATGTAGAAATATGGTAATGcacaaagaattttattccaatGATGGCGATTTTAAATGTGACAAGTGTAATAGACGATGCAAAACATTCGATTTTCTTAATcaacataagaaattaacaCACTCTTGTCGGGATGTTTATAATGGACATATATGTCACATTTGTGGTGAAGTCTTGGAGACAGGTATTTCATTGAAATGTCACGAAAAACACTtccattcaaatattattagcaataaTACGGATAATTGGAAGAATTGTAATCAGCTATCatcttcaaatataatatatccagGTAAATCTAAGAACAATACATGTAATGTAACTGAATACAAATGCTTATTTTGTGATATGAAATTCTCTACTCCTAACACTGTCCAAACACATATTGTTTATGTTCATATGGATGATATGATAGCTGAACGAGCTACTTTAAAACTTGCTCTTCCCATTACTAATAGCAATAACATTCAGAAACAATTTGAAATTGGTCAAATATCATCAACATTGTCactatcatcatcatcatcatcatcatcatcatcatcatcatcaactGAAAGTAAATTAGCTGAACTTCTTCAAAGATCGACGATTCAACAATCTAATAACATCAAAAATACTATGGCTAAAAATGGAATGAACAATAAAactgttgaattatttaagaactTCAGAACTATGTAtccaaaaaatacaattacggAGAAGACttcaaattcatatattaacaAATCTAAAGACAGTATTTCgacatgtaatattattgcattaaataCGGAATCAAAAATAGATAATCCAGTTTCTTCATCCGTTACAACAACTTCTAGGATTGTTGCATCAAATACAGAAATTGGAAACAATGCTTCAATTTTTCTATCCACTGGATCGATATTTAAAACTGTATCCAATACTGAATCCAAAGATAACATTTCTCTATTTGGATCAACCAACAATCTCCGAAAAGGTTATGAAATTCCTTTAAAATCTGGTTCGACCAATGAATTTAAAACTAACTCATTAGCTAAGggatctataataattaataaatcaaaaacaGTACCTGCATATCTTTTACCAACTAGATCCCTATCAACATTCAAACGTATTATGCCAAAACCTTGGAAAAGCAATGAAATTACAAATCagaaatctgaatcagtgaacAGTTACACCACTGGTCATGGTTATTCATGCCCATTATGTCCGCTAGAATATCCATCTTTGCTGTTCTTCCATGCACATCTCAAATATGCTCATGCAGATTCCATCGTTTCCATTCGAACTGATGAATTGACTGTCCCACAGGTGAATAAATCTCAGAAAGTCTCTATGATAGAATGTTTGTTGTGTCCATGTACTTTCCCTGATGAGACCAAATATAAGAAGCATTTGAGAAACTCTCATacatattatgtgtatatccCAAATTCTCAAGAGATGacgaaaattaataacatgcGTAATCCTCTAACACAGACAAACGTTAACAAAAAAAGCACAGTTCTTGAAACAATTACTAtagatgatgatgatgataacgTGAAGAATACATCAAATCAAGGAGTAGTCGAAGTTACAGCGCTCAATTACAAAGAACAGAATGAGAAAATTGGTAAATTAAGAGTGAAGCCTCTTGCAAAgatcattgaaaatttatctatgGATTCTGCATCGAAACTcctataa
Protein Sequence: MARVQPYERVVNAVIIHTNPTLGIEIQNGTKIKEEPIDTTSNTDTTEYDTPIVRNYYSLIDHDHHYCDKSLSNKSCKSINNPENRHSSNDHNVYSNDVTNIANTDRKNVKTKKEIDNTLPRFKKRKYSNEIFSNKNTSALCSVTKNVKRKRKQKSITLDYKKKIQCKNKLIKKGFTCDICFRKFSCLSHSKIHKQYYELDKNNKCRVCNKYFIANDKLQSDTCHCVHSMRSTYLSSYNCNFCSRSFKKKLLLQSHLFHVHNELICFNDTVKREISKSKIFNVNTSSEDDILRTSKNSLCSNNLVQSEKIDTLINVNKSRNDDVINIEKSRTEKLFNNEVSPTKRLRQPTLTEYLELCKKKRNIKFSPNKLNITKDDFPTCALRHDDQIEKLPEEQNGQIDPLSTQSDNLLKRTVRSIQKQNMKHEMHKKPFVKLHADVEMMKSFLEKLSDTVVEDKITEDGTSNIISYDRGIPYSLRSLNGVSSGEASSNLGMRENKSVSKKSRFGTEFNIKNKGNGIDLEKITSKVDWKIIMTHFKCKECTIFLTRCDEQPRNSYQISAFKAKKNTCLTPGYNCQESDVRNEVKLKDVEVSLERLTVVPTVHIKEKTPDVEKHNNNYFLCKVCKESFSSKLAKRIHIKSSHIAYMSSICGARYKLKHKLLQHYLREHVSKQNQCCICYMLLSDYEALKQHLNVHCLKYIQRQDDQYLIDTELECNLTKKSKYLRDETFFSRTSLKEHQNHCMVQKEIEEDQKDSMEETNSSPKDIPEVQHEKTDDIVDITCHENINLDDLCNPLNSDCVKKSNEHQTSLHNKKEQEINEADQNILVNNNLIKEEIGTINESQHPKKLLENNSTINNQDVANTQLNNIATKNGTYPCDICGKQFQTPKNLEIHVRNFSFTSDVCPLCGTGFSSKRFLQSHITAAHVPHISKTYNFHCVFCNQGFFKKHDLRSHILHLHDQQVLNTLTCNPNNQEKSNESVTHSTVCNVCNLVFETHDRYVEHRMYYYKNHTFRCSLCEQNFQGMYMFHHHNKLTHCPEDKRKSYNHICEVCHEGFNHESHFYSHNIHVHSNEVNLGETTKESEDTKNRSRNSSNVQKQIRNCSMDQEKQNEQSNEYICQICQMKCRNMVMHKEFYSNDGDFKCDKCNRRCKTFDFLNQHKKLTHSCRDVYNGHICHICGEVLETGISLKCHEKHFHSNIISNNTDNWKNCNQLSSSNIIYPGKSKNNTCNVTEYKCLFCDMKFSTPNTVQTHIVYVHMDDMIAERATLKLALPITNSNNIQKQFEIGQISSTLSLSSSSSSSSSSSSSTESKLAELLQRSTIQQSNNIKNTMAKNGMNNKTVELFKNFRTMYPKNTITEKTSNSYINKSKDSISTCNIIALNTESKIDNPVSSSVTTTSRIVASNTEIGNNASIFLSTGSIFKTVSNTESKDNISLFGSTNNLRKGYEIPLKSGSTNEFKTNSLAKGSIIINKSKTVPAYLLPTRSLSTFKRIMPKPWKSNEITNQKSESVNSYTTGHGYSCPLCPLEYPSLLFFHAHLKYAHADSIVSIRTDELTVPQVNKSQKVSMIECLLCPCTFPDETKYKKHLRNSHTYYVYIPNSQEMTKINNMRNPLTQTNVNKKSTVLETITIDDDDDNVKNTSNQGVVEVTALNYKEQNEKIGKLRVKPLAKIIENLSMDSASKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01477929;
90% Identity: iTF_00016353; iTF_01477219; iTF_00182258; iTF_00181628;
80% Identity: -