Tdav013102.1
Basic Information
- Insect
- Tetragonula davenporti
- Gene Symbol
- bab1
- Assembly
- GCA_010645165.1
- Location
- WIUW01001876.1:11256-13149[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-14 1.6e-10 40.7 0.2 4 45 340 381 337 381 0.91
Sequence Information
- Coding Sequence
- ATGGCGAGTACGTCGCAGCAGTACTGTCTACGCTGGAATAATCACCGCTCGAATCTCTTGACGGTGTTCGACGAGCTACTGCAAAACGAGGCATTCACCGATGTGACTCTGGCAGTCGACGGCGGCGTGTCCGTCAAATGTCACAAGATGGTATTGGCGGCGTGTTCCTCCTACTTTCAAAGTTTGTTCCTCGACTTGCCGTGCAAGCATCCTATCGTCGTACTGAAAGACGTGAAATATTCGGAGATCAAAGCAATCCTGGAGTACATGTACCGCGGCGAGGTAAACGTTGCCCAGGAGCAATTGGCCGGGTTGTTGAAGATCGCGGAGGTACTGAAGGTGAAGGGGCTTGTTGAAGAGAACGGGTCCCAAGGCCGTCGTGAAGAAATCGAAACGTCCATGTCGCCTCCGCCAGCCATCAGCACCAGTACAACCGGCAGTGCAGTTCATAGCAGTGATCACGCGTCCCCGCCGCATTCCACGGGAACTACGTACGATATCTACGGCAAATCGCCAGTGGACGGAAGTAGCCGTTTACCGCTACCGATGTGGTCTCTGCCGGGGATTCCCATGACTCATTCCAGCACCGGTCACCAGACGGCGACGCATCAACATTCTCCAATGTTGACTGGCTCGTCGCCCATTTTAACCGGCTTCGAGACCTCGCCGTTGAAGCACAAGAAACTCTCGAATATGTTGATGAACAGAGACACGCCGATCCTGAGGACTGTGCTGGGTCAAGGTCACGCGGATAGCTCCCAAGGGATACCCCTGTTGCACCCGGACAGCCACGAGAATCAATTTAGAAATAGCAGTAACGGCTCGTCGAACGAGAACGATAGACGGGCTAGTATGGATCTAGTTCACGGGGAACCAGCGCATAGCCCTTATACCGACGTGTCCATCATGGACGAAGATGACAAGCAATCGTACCCCCCGGATATTAAACCAGGGATGGTCAACTACGTACCAGCGCAAAAGCCGGAGTGGAAACGGTACAAGCAATACACGAGGCACGACATAATGTCCGCGATCGAGGCGGTACGTTCAGGAATGAGTGCCCTGCAGGCGGCACGTAAGTACGGAGTACCCTCTCGAACTCTTTACGACAAGGTAAGGAAATTAGGAATCACGACGTCGCGACCGTTTAAACGCGGATCGAACGGCAGTGGCGCCTGTTTCCCGTACGGGATCGGTGGTAACGCGAACGGTAACATCTACAGTGGCGCCCTCTCtgaaaacgagaacgaaagtGGCAACGTGATCGAGGGTCCTGGGTCTACCCTCGACACGTGCAAGTCGAGAGACGCTCCTGTAGATAGGGAAATCGCAGACGTTAACCGTTGTACGTCCAGCCCTACGGTTCATTCGGTGAAACAGCCGAGCAACGAGGATCAAGTCGAGGATCTTTCTGTGAGTCGTAAGTCGGACGTTCGCGTGATAGTTCCGCCAACGTCAGTGATTAAGAACGAGGAGGATATTGGCTCTGACTCTTGCAGTCGCAATTAA
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGVSVKCHKMVLAACSSYFQSLFLDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKIAEVLKVKGLVEENGSQGRREEIETSMSPPPAISTSTTGSAVHSSDHASPPHSTGTTYDIYGKSPVDGSSRLPLPMWSLPGIPMTHSSTGHQTATHQHSPMLTGSSPILTGFETSPLKHKKLSNMLMNRDTPILRTVLGQGHADSSQGIPLLHPDSHENQFRNSSNGSSNENDRRASMDLVHGEPAHSPYTDVSIMDEDDKQSYPPDIKPGMVNYVPAQKPEWKRYKQYTRHDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVRKLGITTSRPFKRGSNGSGACFPYGIGGNANGNIYSGALSENENESGNVIEGPGSTLDTCKSRDAPVDREIADVNRCTSSPTVHSVKQPSNEDQVEDLSVSRKSDVRVIVPPTSVIKNEEDIGSDSCSRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_01419720; iTF_01421011; iTF_01420855; iTF_01418430; iTF_01418272; iTF_00216993; iTF_00218337; iTF_00219201; iTF_00216482; iTF_00223106; iTF_00230115; iTF_00233315; iTF_00215109; iTF_00217157; iTF_00219717; iTF_00225157; iTF_00231237; iTF_00217670; iTF_00228583; iTF_00217832; iTF_00225833; iTF_00219882; iTF_00222442; iTF_00227882; iTF_00231402; iTF_00225324; iTF_00215629; iTF_00215792; iTF_00218512; iTF_00223280; iTF_00223793; iTF_00226002; iTF_00222611; iTF_00226515; iTF_00216308; iTF_00220501; iTF_00228055; iTF_00228759; iTF_00219032; iTF_00224474; iTF_00226682; iTF_00229274; iTF_00220667; iTF_00223964; iTF_00227196; iTF_00229436; iTF_00224637; iTF_00229949; iTF_00233149; iTF_00227359; iTF_00214944; iTF_00230766; iTF_00221348; iTF_00230618; iTF_00221183; iTF_01417785; iTF_01417624; iTF_01418921; iTF_01419078; iTF_00983677; iTF_00983537; iTF_00982210; iTF_00982372; iTF_00982888; iTF_00983048; iTF_00873877; iTF_00873720;
- 80% Identity
- iTF_01419720; iTF_01421011; iTF_01420855;