Bhor005470.1
Basic Information
- Insect
- Bombus hortorum
- Gene Symbol
- bab1
- Assembly
- GCA_905332935.1
- Location
- HG995203.1:4863368-4865303[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-16 9.1e-13 48.0 0.1 1 45 341 385 341 385 0.97
Sequence Information
- Coding Sequence
- ATGGCGAGTACCTCGCAGCAGTACTGTTTGCGCTGGAACAATCACCGCTCTAATTTACTGACAGTGTTCGATGAGTTACTGCAAAATGAGGCATTCACTGACGTGACTTTAGCAGTTGACGGAGGCGCGTCTGTCAAATGCCACAAGATGGTCCTAGCAGCATGTTCCTCCTACTTCCAAACTCTGTTCATTGACTTGCCATGCAAACATCCTATCGTCGTATTGAAAGACGTGAAGTATTCTGAGATCAAAGCCATCCTGGAGTATATGTACCGAGGCGAAGTAAACGTGGCTCAAGAGCAATTGGCTGGGTTATTAAAAGTCGCGGAAGTACTAAAGGTGAAAGGGTTGGTTGAAGAAAATGGCTCCCAAGGTCGTCGTGAAGAGGTTGAAACCTCTATGTCACCTCCTCCAGCCATAAGCACCAGTACAACCAGCAGCGCAGCTCACAGTAGTGATCATACGTCTCCTCCACATTCCACGGGGACTACTTACGATATTTATGGCAAATCACCAGCTGATAGAAGTAGCCGTTTACCGCTGCCAATGTGGCCTCTACCAGGGATTCCCATCACTCATTCCAGCTCCAGTCACCAGACGGCGACACATCAACATTCTGCCATGTTAAGCGGGTCATCATCCATTTTAACCGGTTTTGAGACTTCTCCATTGAAACGCAGGAAACTCTCAAATATGTTAATGAACAGAGACACACCGATTCTCAGAACGGTACTGGGTCAAGGTCACGCGGATAGTTCCCAAGGGATTCCCCTCTTACACCCTGATAGCCACGAAAATCAGTTCAGAAGCAACAGTAATGGCTCCTCGAATGAGAATGACAGACGCAGTAGTACGGATGTAGTTCATGGGGATCCTGCACATAGTCCTTATACTGATGTGTCTATAATGGATGAAGACGATAAGCAAGCATCGCCACAGTCATATATTCCAGACATTAAACCAGGGATGGTTAACTACGTACCAGCGCAAAAGCCAGAATGGAAACGGTACAAGCAATACACGAGGGACGACATAATGTCTGCGATCGAGGCAGTACGTTCGGGAATGAGTGCCCTCCAGGCGGCACGTAAGTACGGTGTACCCTCTCGAACTCTTTACGATAAAGTGAAAAAGCTAGGAATCACGACATCACGACCATTTAAGCGTGGCTCGAATGGTAGTGGTGCCTGTTTTCCTTATGGAATCGGTGGTAACGCAAATGGCAACATCTACAGCGGTGCCCTCTCGGAAAACGAAAACGAGAGTGGCAGTGTGATCGAGGGTTCTGGATCTATCCTCGATGCGTATAAGTCGAGAGACGGTCTTGTAGACCGAGAGATGTTGGACGTCAGTCGTTGCACCTCTAGCCCCATAGTGCATTCCGTGAAACAGCAGAACAACGAAGATCAGGTCGAAGATCTCTCTATAAGTCGTAAGTCGGATGTTCGTGTGATAGTCCCACCAACCTCAGTGATCAAGGATGAGGAGGATATTGGCTCTGATTCGTGTAGTCACAATTAA
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGASVKCHKMVLAACSSYFQTLFIDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKVAEVLKVKGLVEENGSQGRREEVETSMSPPPAISTSTTSSAAHSSDHTSPPHSTGTTYDIYGKSPADRSSRLPLPMWPLPGIPITHSSSSHQTATHQHSAMLSGSSSILTGFETSPLKRRKLSNMLMNRDTPILRTVLGQGHADSSQGIPLLHPDSHENQFRSNSNGSSNENDRRSSTDVVHGDPAHSPYTDVSIMDEDDKQASPQSYIPDIKPGMVNYVPAQKPEWKRYKQYTRDDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSGACFPYGIGGNANGNIYSGALSENENESGSVIEGSGSILDAYKSRDGLVDREMLDVSRCTSSPIVHSVKQQNNEDQVEDLSISRKSDVRVIVPPTSVIKDEEDIGSDSCSHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_01419560;
- 80% Identity
- iTF_00216993;