Bhae009939.1
Basic Information
- Insect
- Bombus haemorrhoidalis
- Gene Symbol
- bab1
- Assembly
- GCA_014825975.1
- Location
- CM026176.1:3727612-3729551[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-16 7.9e-13 48.0 0.1 1 45 341 385 341 385 0.97
Sequence Information
- Coding Sequence
- ATGGCAAGTACCTCGCAGCAGTACTGTTTGCGCTGGAACAATCACCGCTCTAATTTACTGACAGTATTCGATGAGTTGCTGCAAAATGAGGCATTCACTGACGTGACTTTGGCAGTTGACGGAGGCGCGTCTGTCAAATGCCACAAGATGGTCCTAGCAGCATGTTCCTCCTACTTCCAAACTCTGTTCATTGACTTGCCATGCAAGCATCCTATCGTCGTATTGAAAGACGTGAAGTATTCTGAGATCAAAGCCATCCTGGAGTATATGTACCGAGGTGAAGTAAACGTGGCTCAAGAGCAATTGGCTGGGTTATTAAAAGTCGCGGAAGTACTAAAGGTAAAGGGGTTGGTTGAAGAAAATGGCTCCCAAGGTCGTCGTGAAGAGGTTGAAACCTCTATGTCACCTCCTCCAGCCATAAGTACCAGTACAACAAGCAGCGCAGCTCACAGTAGTGATCATACGTCTCCTCCACATTCCACGGGGACTTCTTATGATATTTATGGCAAATCACCAGCTGATAGAAGTAGCCGTTTACCACTGCCAATGTGGCCTCTACCAGGGATTCCCATCACTCATTCCAGCTCCAGTCACCAGACGGCGACACATCAACATTCTGCCATGTTAAGCGGGTCATCATCCATTTTAACCGGTTTTGAGACTTCTCCATTGAAACGGAGGAAACTCACAAATATGTTAATGAACAGAGACACACCGATTCTCAGAACGGTGCTGGGTCAAGGTCACGCGGATAGTTCCCAAGGGATTCCCCTCTTACACCCGGATAGCCATGAAAATCAGTTCAGAAGCAATAGTAATGGCTCCTCGAATGAGAATGAGAGACGCAGTAGTACGGATGTAGTACATGGGGATCCTGCACATAGTCCTTATACTGATGTGTCTATAATGGATGAAGACGATAAGCAAGCATCGCCACAGTCATATATTCCAGACATTAAACCAGGGATGGTTAACTACGTACCAGCGCAAAAGCCAGAATGGAAACGGTACAAGCAATACACGAGGGACGATATAATGTCTGCGATCGAGGCAGTACGTTCGGGAATGAGTGCCCTCCAGGCGGCACGTAAGTACGGAGTACCCTCTCGAACTCTTTACGATAAGGTGAAAAAGCTAGGAATCACGACATCACGACCATTTAAACGTGGCTCGAATGGTAGTGGTGCCTGTTTTCCTTATGGAATCGGTGGTAACGCAAATGGCAACATCTACAGCGGTGCCCTCTCGGAAAACGAGAACGAGAGTGGCAGTGTGATCGAGGGTTCTGGATCTATCCTCGATGCGTATAAGTCGAGAGACGGTCTTGCAGACCGGGAGATGTTGGACGTCAGTCGTTGTACCTCTAGCCCCATAGTGCATTCCGTGAAACAGCAGAACAACGAAGATCAGGTCGAAGATCTCTCTATAAGTCGTAAGTCAGATGTTCGTGTGATAGTTCCACCAACCTCAGTGATCAAGGACGAGGAGGATATTGGTTCTGATTCGTGTAGTCACAATTAA
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGASVKCHKMVLAACSSYFQTLFIDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKVAEVLKVKGLVEENGSQGRREEVETSMSPPPAISTSTTSSAAHSSDHTSPPHSTGTSYDIYGKSPADRSSRLPLPMWPLPGIPITHSSSSHQTATHQHSAMLSGSSSILTGFETSPLKRRKLTNMLMNRDTPILRTVLGQGHADSSQGIPLLHPDSHENQFRSNSNGSSNENERRSSTDVVHGDPAHSPYTDVSIMDEDDKQASPQSYIPDIKPGMVNYVPAQKPEWKRYKQYTRDDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSGACFPYGIGGNANGNIYSGALSENENESGSVIEGSGSILDAYKSRDGLADREMLDVSRCTSSPIVHSVKQQNNEDQVEDLSISRKSDVRVIVPPTSVIKDEEDIGSDSCSHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_01419560;
- 80% Identity
- iTF_00219882;