Mbee012866.1
Basic Information
- Insect
- Melipona beecheii
- Gene Symbol
- bab1_2
- Assembly
- GCA_032399605.1
- Location
- JAUCMO010000502.1:693729-695570[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-14 1.5e-10 40.7 0.2 4 45 344 385 341 385 0.91
Sequence Information
- Coding Sequence
- ATGGCGAGCACGTCGCAGCAGTACTGTTTGCGCTGGAATAATCACCGCTCAAATCTGTTGACGGTGTTCGACGAACTATTGCAAAACGAGGCATTCACCGATGTGACACTGGCAGTCGACTGTGGCATGTCCGTCAAATGTCACAAGATGGTCCTGGCGGCGTGTTCCTCCTACTTTCAAAGCTTGTTCCTCGATTTGCCATGCAAGCACCCTATCGTCGTGTTGAAGGACGTGAAATATTCGGAGATCAAAGCAATCCTTGAGTACATGTACCGCGGCGAAGTAAACGTGGCCCAGGAACAATTGGCCGGGTTGTTGAAGATCGCGGAGGTGCTAAAGGTGAAGGGGTTGGTTGAAGAAAATGGCTCCCAAGACCGCCGTGAGGAGGTTGAAACCTCGATGTCTCCGCCGCCAGCCATCAGCACCAGTACAACCAGCAGTGCGGTTCATAGCAGTGATCACGCGTCTCCTCCGCATTCCACAGGAACTACGTACGATATCTACGGCAAATCACCAATCGACAGAAGCAGTCGTTTACCGTTGCCGATGTGGTCCCTACCTGGCATCCCCTTGACTCATTCCAGCACCGGTCACCAAACGGTGGCGCATCAACATTCCCCTATGTTGGCCGGCTCGTCATCCATTTTGACCGGCTTCGAGACCTCTCCGTTGAAGCACAAGAAACTTTCGAACATGTTGATGAACAGAGACACGCCGATTCTGAGGACGGTGCTGGGTCAGGGTCACGCGGATAGCTCCCAAGGAATTCCCCTATTGCACCCGGACAACCACGAGAATCAATTTAGAAACAGCAGCAACGGCTCGTCGAACGAGAACGATAGACGTGGTAGTATGGATGTAATTCACGGGGAACCTCCGCACAGTCCTTACACCGACGTGTCTATGATGGATGAAGATGATAAGCAATCGTCGCCGCAGTCGTACCCTCCTGATATTAAATCAGGGATTGTTAATTACGTGCCAGCGCAAAAGCCGGAGTGGAAACGGTACAAGCAATACACGAGGCACGACATAATGTCCGCGATCGAGGCGGTACGTTCGGGAATGAGTGCTCTCCAGGCGGCACGTAAGTACGGAGTACCCTCTCGAACTCTTTACGACAAGGTAAGAAAATTAGGGATCACGACATCGCGACCGTTTAAACGTGGATCGAATGGTAGCGGCGCCTGTTTCCCTTACGGGATCGGTGGTAACGCGAACGGCAACATCTACAGTAGCGCTCTCTCggaaaacgagaacgagagcGGCAGCGTGATTGAGGGTCCTGGATCCACGCACGACGCGTGCAAGTCGAGAGACGCTCCTGTAAATCGGGAAATCGTAGACGTTAATCGCTGTACATCCAGCCCTACGGTGCACTCCGTGAAACAGCCGAGTAACGAGGATCAGGTCGAGGATCTTTCTGTGAGTCGCAAGTCGGACATTCGCGTGATAGTTCCACCAATGTTGGTGATTAAAAACGAAGAGGATATTGGCTCTGACTCTTGCAGTCACAATTAA
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDCGMSVKCHKMVLAACSSYFQSLFLDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKIAEVLKVKGLVEENGSQDRREEVETSMSPPPAISTSTTSSAVHSSDHASPPHSTGTTYDIYGKSPIDRSSRLPLPMWSLPGIPLTHSSTGHQTVAHQHSPMLAGSSSILTGFETSPLKHKKLSNMLMNRDTPILRTVLGQGHADSSQGIPLLHPDNHENQFRNSSNGSSNENDRRGSMDVIHGEPPHSPYTDVSMMDEDDKQSSPQSYPPDIKSGIVNYVPAQKPEWKRYKQYTRHDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVRKLGITTSRPFKRGSNGSGACFPYGIGGNANGNIYSSALSENENESGSVIEGPGSTHDACKSRDAPVNREIVDVNRCTSSPTVHSVKQPSNEDQVEDLSVSRKSDIRVIVPPMLVIKNEEDIGSDSCSHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_01419560;
- 80% Identity
- iTF_00982372;