Tang005709.1
Basic Information
- Insect
- Tetragonisca angustula
- Gene Symbol
- bab1
- Assembly
- GCA_036937485.2
- Location
- JAWNGG010000044.1:757002-759053[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-14 1.9e-10 40.7 0.2 4 45 342 383 339 383 0.91 2 2 5.4 1.1e+04 -3.4 0.0 29 39 427 437 427 441 0.83
Sequence Information
- Coding Sequence
- ATGGCGAGCACGTCGCAGCAGTACtgcttgcgctggaataatcACCGCTCGAATCTGTTGACGGTGTTCGACGAGCTGCTGCAAAACGAGGCATTCACCGATGTGACACTGGCAGTCGACGGCGGCGTCTCCGTCAAATGTCACAAGATGGTCCTGGCGGCGTGTTCATCCTACTTTCAAAGCTTGTTCCTCGACCTGCCGTGCAAGCACCCAATCGTCGTGTTGAAGGACGTGAAATATTCGGAGATCAAAGCGATCCTCGAGTACATGTACCGCGGCGAAGTGAACGTCGCCCAGGAGCAATTGGCCGGGTTGTTGAAGATCGCGGAGGTGCTGAAGGTGAAGGGGCTGGTCGAGGAAAATGGCTCCCAAGGCCGTCGCGAGGAGGTTGAAACGTCCATGTCGCCGCCGCCGGCCATCAGCACCAGTACGACCAGCAGTGCGGTTCATAGCAGTGATCACGCGTCTCCTCCGCATTCCACGGGCACCGCGTACGATATATACGGCAAATCGCCAGCCGACAGAAGCAGTCGTTTACCGTTGCCGATGTGGTCCCTACCGGCGATCCCCATGACCCACTCCAGCACCGGTCACCAAACGGTGGCGCATCAACATTCCTCTATGTTGGCCGGCTCGTCGCCCATTCTCACCGGCTTCGAGACCTCACCGTTGAAGCACAAGAAACTTTCGAACATGCTGATGAACAGAGACACGCCGATCCTGAGGACGGTGCTTGGTCAGGGTCACGCGGACAGCTCCCAAGGGATCCCTCTGTTGCACCCGGACAGCCACGAGAATCAGTTTAGAAACAGCAGCAACGGCTCGTCGAGCGAGAATGATAGACGGGGTAGCATGGATGTGGTTCACGGGGAACCAGCGCACAGCCCTTACACAGACATGATGGATGAAGATGATAAGCAATCGTCGCCGCAGTCGTACCCTCCTGACATTAAACCAGGGATGGTTAATTACGTGCCAGCGCAAAAGCCGGAGTGGAAACGGTACAAGCAATACACGAGGCACGACATAATGTCCGCGATCGAGGCGGTACGCTCGGGTATGAGTGCCCTCCAGGCGGCACGTAAGTACGGAGTACCCTCTCGAACTCTTTACGACAAGGTAAGGAAGTTAGGGATCACGACGTCGCGACCGTTTAAACGGGGATCGAACGGCAGCGGCGCCTGTTTCCCTTACGGGATCGGCGGCAACGCGAACGGCAACATCTACAGTGGCGCTCTCTCGgaaaacgagaacgagagCGGCAGCGTGATCGAGGGTCCTGGGTCCACGCTCGACGCGTGCAAGTCGAGAGACGCTCCTGTAGATCGGGAAATCGTAGACGTTAGTCGCTGCACGTCCAGCCCCACGGTGCACTCCGTGAAACAGCCGAGCAACGAGGATCAGGTCGAGGATCTTTCTGTCAGTCGTAAGTCGGATGTTCGCGTGATAGTGCCGCCAACGTCGGTGATCAAGAACGAGGAGGATATTGGCTCCGACTCTTGCAGTCACAATTAA
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGVSVKCHKMVLAACSSYFQSLFLDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKIAEVLKVKGLVEENGSQGRREEVETSMSPPPAISTSTTSSAVHSSDHASPPHSTGTAYDIYGKSPADRSSRLPLPMWSLPAIPMTHSSTGHQTVAHQHSSMLAGSSPILTGFETSPLKHKKLSNMLMNRDTPILRTVLGQGHADSSQGIPLLHPDSHENQFRNSSNGSSSENDRRGSMDVVHGEPAHSPYTDMMDEDDKQSSPQSYPPDIKPGMVNYVPAQKPEWKRYKQYTRHDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVRKLGITTSRPFKRGSNGSGACFPYGIGGNANGNIYSGALSENENESGSVIEGPGSTLDACKSRDAPVDREIVDVSRCTSSPTVHSVKQPSNEDQVEDLSVSRKSDVRVIVPPTSVIKNEEDIGSDSCSHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_01419560;
- 80% Identity
- iTF_01417785;