Basic Information

Gene Symbol
ZNF236
Assembly
GCA_963978835.1
Location
OZ022233.1:2850275-2865750[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 8.4e-06 0.001 20.1 0.6 2 23 185 206 184 206 0.96
2 28 4.2e-05 0.0052 17.9 0.6 1 23 212 234 212 234 0.98
3 28 3.4e-06 0.00042 21.4 0.4 2 23 240 261 240 261 0.98
4 28 0.0087 1.1 10.7 0.2 3 23 269 289 267 289 0.96
5 28 8.2e-05 0.01 17.0 1.0 2 23 300 321 300 321 0.98
6 28 1.1e-06 0.00013 22.9 1.0 1 23 342 364 342 364 0.99
7 28 7.7e-06 0.00095 20.3 0.4 1 20 370 389 370 392 0.94
8 28 0.00012 0.015 16.5 1.1 1 23 398 421 398 421 0.95
9 28 1.8e-05 0.0023 19.1 3.7 1 23 430 453 430 453 0.98
10 28 6.6e-07 8.3e-05 23.6 1.4 1 23 565 587 565 587 0.99
11 28 2.5e-05 0.0032 18.6 1.1 1 23 593 615 593 615 0.99
12 28 0.023 2.9 9.3 8.1 1 23 621 643 621 643 0.98
13 28 8.8e-06 0.0011 20.1 0.8 1 23 649 671 649 671 0.97
14 28 0.00039 0.049 14.9 3.6 1 23 726 748 726 748 0.98
15 28 4.1e-06 0.00051 21.1 3.7 1 23 754 776 754 776 0.99
16 28 2.1e-05 0.0026 18.9 1.5 1 23 782 804 782 804 0.98
17 28 0.00012 0.015 16.5 7.2 1 23 810 832 810 832 0.98
18 28 0.00054 0.067 14.4 8.5 1 23 1156 1178 1156 1178 0.98
19 28 0.057 7.1 8.1 0.8 2 23 1202 1223 1201 1223 0.97
20 28 1.5e-05 0.0019 19.3 1.4 1 23 1229 1251 1229 1251 0.98
21 28 0.0046 0.57 11.5 0.6 2 23 1258 1279 1257 1279 0.92
22 28 6.1e-08 7.6e-06 26.9 1.4 2 23 1344 1365 1343 1365 0.98
23 28 0.072 9 7.7 8.0 1 23 1371 1393 1371 1393 0.98
24 28 0.00011 0.013 16.7 2.5 1 23 1399 1421 1399 1421 0.98
25 28 0.0016 0.2 12.9 3.7 1 23 1427 1449 1427 1449 0.99
26 28 0.015 1.9 9.9 1.8 3 23 1649 1669 1649 1669 0.99
27 28 7e-05 0.0087 17.2 6.5 1 23 1675 1697 1675 1697 0.98
28 28 2.8e-06 0.00035 21.6 3.8 1 23 1703 1726 1703 1726 0.96

Sequence Information

Coding Sequence
ATGTTATCTGAGCAAGCTATTCTCGCAGAGCAGCTTGGGACCAATGCGGAGACTATGCCGCTTGGGTTTATCATCTCTGATGATGGACGGACCCTGCTTGCGGTCACAGaaCGCGACGACGGGGTCCTTGAGTTTATGTCTGTACCGGTGACGATCCAGCAAAGTAATATAAGCAACATAACATCAGGATCTTTAAAACCGAGCGAAGGAAACCCCATATttcaaattacacttgaagGAATGACCGGAGATACCGCAGACCAAGCTACAGCAGCTCTGTTTCAAAGTCAAGGCTATCATAGCCTACCTGCTGTTTCTGATGAGGTGGAATCGTCCTACCAAACAGCGAAGGAGATTCAAATAGATTCCCCTAGTACTGTACTGTTCACTCCTAGCAGAGCGGAAACCAGCGTCTTGGAGACTAAAagttttgaaatatttgaggCCCCCGCACCTCTACCGGCTCCTGCTTTACCCACTGTTGTGAAACGAAGCCCTGGGAGGCCGAGAAAGGATGGAAGTAGTCCGCCTTCTATTCATACTAACAACTTgaaatgtaaaatatgcgGAAAGGGATTCAACAGACTGATGTTACTTAGAAGACACATAGAACAACATGCAGAAGAAAAACCACATCGTTGTCCGAAGTGTCCAGCATCTTTTAACGTTCCTACTAATTTTACGCTTCATATGGCAACGCACAACATCGGCGAACCAAAGTGTCCAGAATGTGGACGAAAGTTTGCTAGGATGGCCAGCCTTAAATCTCACATGCTTATGCACGAAAAGGAGGAAAATTTATTCTGTACTGAGTGCGAGGACGCTTTTACAACCAAGGCTCAGTTAGATGCCCATTTAAAACTACACAATGAAAAATGGACCACGGAAGATGTTAGGAAGTGTAAACTCTGTAACAAACAGTTTACACAGCCAGCTCTTTATCGTCTACATATTCGTGAGCACTATAGATTACAAACGAAGTTAGTTAAACACACAAAAAAAGGCGTCAAACAGAAGACCATGTACAAATGTAAAATATGTTTGAAATCATTTCAAAAACCGAGTCAGCTAGTACGCCACATCAGGGTTCACACTGGTGAGAAACCCTTCCAGTGCACGATTTGTCCCCGAGCATTCACGCAGAAAGGATCCCTCCAGATTCATATGTGGAAACACAATGGGTTTAGACCGCACAATTGCAGTTCTTGCAACGCGAAATTCAGTCAAAAAGGCAATTTGAACGCGCATATATTACGAGTTCATAATGTTCCTGATGGAAAGCCTTATTACAAATGCACGTACTGTCCATGTACATTCAAAAAACTCGGAAGTCTTAATGCCCACATGAAGAAAATGCATTCGAATCCAGTTAAGAAGCCACAAAACTGCGACAGTTCTACTGAAGATATGCAAGCCACAGTTGACACAGTAATGTCACAATTAGCTATGCTTGAATCGAGTGTTAAAAACCCAGCAGATTCTACAGGAAAAAATCCTTCTAACAAAGACATTTTACAACAGGCTTTAAAAAACAGTGGATTACCCAGTAAGGATAAGGAATCAGCATCAGGACAAATTCCAAAGAAGGGAGAAGCACATACTACCATGGTCACTTTATTAGACAGCAGTATAGACAGTGCTACAAGGAAATACGTTACTATCAAGCAACGCACTATAGGAAATATTAGATGGTATACATGTTCCTACTGCTACAAAGAATTCAAAAAACCATCAGATCTTATACGACATTTACGTATTCATACACAGGAAAAACCATTCAAGTGCTCGTATTGTTCTCGATCTTTCGCTGTTAAATCAACGATGATAGCTCATGAAAGAACTCATACAGGAGTTAAGAAATACATGTGCTGTAACTGCAATAAAATGTTTGCCTGTCATAGCAGCCTGACAACACATATGAGAGTTCATGCCGGGGCAAAGCCTTTTGCCTGCAATATGTGCGACAAATCTTTCACAGCAAATACCTTACTTAAAACTCACATGAAATGGCATGCTAAAGGAAAGACAAAGGCCAGTCCTGAAGCAGAAGTTCTTGCACCGTCTATAGTACTCGAGGAACCTTTAATAATAACTGATGCAGGAAATAAAATCAGCATTGCTCAAGTGCAATCTAAACATCAGCAAGTATATAATAGCAATGATGTCGCTAGACCACATAAATGTTGGGTCTGTCCTGCGGCGTTCAGAAAAATTAGTCACTTGAAACAACACTATCGAAGGCACACAGGAGAGCGGCCATATAAATGCCAGAAATGCAATAGGAGATTTACGTCAAATAGTGTATTGAAATCTCATCTACGGACCCATGAGGGATCAAGACCTTATAATTGTTCAATGTGCAATGCGAAATTTTCTACTCAAAGCAGCATGAAACGACATCTTGCTACTCACAGTAATAAGAGACCATTTATGTGCCCTTACTGTCATAAAACGTTCAAGACTTCTGTTAATTGTAGAAAGCACATGAAAATACATAAGCACGAGCTGGCGCAGCAGCAGTTGCATCAACAACAGACCCATCATCAACAGACTACTGAGCTTGAGGATAAACCAGGAATTACACTATTGTCGGAAAATATTAATCTGCCTGACGAACTGGAAGTCACATTCCAGCCGCAAATGGCACCTGATTTTACACAAGCATTTTCTGATCAGTTTCATACAATACCAGttgaaaaagataaaacatTACTGCCCGAAAACAATCCAATAGAAGCTATTGTCAATCAAACACTACCAGCTGGTGGACCTATTAACTTGGGATCATCCCAAACCCTTCATGCGGATGAGACGGGGACTATAACGCTGCCAAATTATTCTGGAGATCAAACACTAACACcgGAAAGTATaagagaaattgaagaaacgTTGAATCAACAGCTCTTCAATATTGGTATGAATCTTGGCCTGGGAGGTAATTTAACAAGGCAAATGAACGAATCTACTCCCAACTCTTTAGGACAACGTGAACAACCTATTTTAAATATCATATACGGAAATACGAAGAACATAGATGCCCCAGCAAACGCTACAATAAACACTGGAATATTTTCACCACAATTTGACTCTTTTGATATGAGTCATATCACATTGCAGGCAGATAACGAGATGGATATCGGAATTACTCCAGCAAATTCTACAAGTATGGCAAGCATCTTGCCCAGATCGGCTCAGGAAGAACAACACCTGGTATCGGTTACTACAACGACATCAATGCCAGAGGATAATCAATCGAAACAACCAAGGCATCTGATGGTTGTAAGTTCGATGCAATCCTGTCCTGAATTATCTCGCCCGGTTCAAGCCTGCCCAAAATATCCAAAAGTTATTGCGAAAGCAGATACAACTGATGGCTTAGACATACAATCATCCGATGAAACTATGAAGGAAAACATCAAGTCTGAATCTTTACTTTTGGATGAAAAACCAACGCGAATTCTTTCCCACCAatGCAAAATCtgtgataaatattttcataaacaATCTCAATTGAGAACTCATAAGAAGACTCACGCCTTAGCAATGCAGGAAAAACCTCCTAAAATTGAACTTGCACCTGAAAACGAATCCGACAATCTATTGCAGTGCCATATGTGTAGTAAATCAGGACTCACAGCTGTTGCCTTAAAGGATCATCTCAAAACACACAGAGGAGCCAAAGAATTTCAATGCACGGAATGCCCTTTGAAATTTTGCACCAATGGAGGACTTAGCAGGCACattaaaatacataataataaagtACGATGGAAATGTACGACATGTGATCTGACGTTTCAAACTAAAGCTCAATTATCAATTCACGAAGAGTTTCATCAGAATAATACTAACTTGAACACAGTGGAACCGGACAGTTCTCAAAAAGATCCATTAACGATAGACGGCAACTACTTGACCCATCCTGAAATACAATTAGAAAACGGTAGTAATCTATCTGAAAAAGTTCTCATGGATGATGTGACTGAAAAGGAGACAGATgtaaaaaaggagaagaaaatatatacaaacaaATGCAAATACTGTCCAAAAACCTTCCGAAAACCCAGTGATCTTGTGAGACATATCAGAACCCACACAGGGGAGAGACCCTATCAGTGTGAATATTGTAACAAATGTTTTGCAGTTAAATGTACCTTGGATTGCCATATGAAAGTCCATACTGGTAAGAAGACCTTTTCATGCCATGTTTGCAACAGCCTTTTCACAACCAAAGGCAGTCTCAAGGTACACATGAGGTTGCATACAGGTTCTAAACCGTTCAAATGTTCATCCTGCGATTTACGATTCAGAACTTCGGGGCATAGAAAAGTACATTTATTAACCCACATGAGAGAGCACAAGGATCCGTCAAAGCCCAAACCGAAGCCTCGTAAAGTTGCTGCCATTGCTGAAGTCGCTGCTGAACTAGAAAGAACTGTTGAGCACGGAGTTAATACTGATACAGCAGTTCCTCAGCCTGGGGAATACCCCAATCTTGATTCAATTACGATTGATACTAGTACCCTAACTGATAATATCACTCCACACATTACTTTCAACGCAGATGGAACCATCCTTAACAACAATGCTATGTTATCTATAAACGAGAGCAATCAGCTTGTTGCTAATCTGCATTTCCTTCTCGCTAATGGACTAGTCACGATACAGACTGACGACGCTCTTTTACAGCAACTACCTGATGCTGATTCGAATTCAATGGAACAAACAGAATCGTTGATTGTCGCGCCTGATATGAATGAATCAAATCCTCAGGCAGTTTTATACGAAACCGAAGGCATGCCTAATGCGGATACAGAGTCCCATGGGACTTTGGAATTAAATCATTGTATGGAAATGGGAAGCCCTGATGAGGTTGCATCGTTGTCTGACATCGAAGAGAACAAGGCTAAACTGACGATTGATAAAACTCAGTTCAGAAGAGGCTGCGACATTTGCGGAAAGACTTTTCTCAAACCGTGTCAAGTGGAACGACACAAAAGAATCCACACCGGTGAAAGACCGTATAAATGCAATTTGTGCTCTAAGTCATTTACACAAAAGAATACTTTGAAAATGCATCAGAAACACCATACGGGAGACAGACCACATCCCTGTCCACATTGCGATTTTTCGTTCACTCAAAAGGGGAACTTGAAAACACATCTGAAACGGGTTCATCAGTTGGATACTTTGGGTATAAAGAAACTGCGGAGAGGACAACACGTGCTTAGTGCTAAATTTACGCAAGATAATTTAGATGAGACTAGAATAATCGGCTTGGAAGATATCGCATTCGCTAATATTCCTTGA
Protein Sequence
MLSEQAILAEQLGTNAETMPLGFIISDDGRTLLAVTERDDGVLEFMSVPVTIQQSNISNITSGSLKPSEGNPIFQITLEGMTGDTADQATAALFQSQGYHSLPAVSDEVESSYQTAKEIQIDSPSTVLFTPSRAETSVLETKSFEIFEAPAPLPAPALPTVVKRSPGRPRKDGSSPPSIHTNNLKCKICGKGFNRLMLLRRHIEQHAEEKPHRCPKCPASFNVPTNFTLHMATHNIGEPKCPECGRKFARMASLKSHMLMHEKEENLFCTECEDAFTTKAQLDAHLKLHNEKWTTEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKLVKHTKKGVKQKTMYKCKICLKSFQKPSQLVRHIRVHTGEKPFQCTICPRAFTQKGSLQIHMWKHNGFRPHNCSSCNAKFSQKGNLNAHILRVHNVPDGKPYYKCTYCPCTFKKLGSLNAHMKKMHSNPVKKPQNCDSSTEDMQATVDTVMSQLAMLESSVKNPADSTGKNPSNKDILQQALKNSGLPSKDKESASGQIPKKGEAHTTMVTLLDSSIDSATRKYVTIKQRTIGNIRWYTCSYCYKEFKKPSDLIRHLRIHTQEKPFKCSYCSRSFAVKSTMIAHERTHTGVKKYMCCNCNKMFACHSSLTTHMRVHAGAKPFACNMCDKSFTANTLLKTHMKWHAKGKTKASPEAEVLAPSIVLEEPLIITDAGNKISIAQVQSKHQQVYNSNDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCNRRFTSNSVLKSHLRTHEGSRPYNCSMCNAKFSTQSSMKRHLATHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQQQLHQQQTHHQQTTELEDKPGITLLSENINLPDELEVTFQPQMAPDFTQAFSDQFHTIPVEKDKTLLPENNPIEAIVNQTLPAGGPINLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGGNLTRQMNESTPNSLGQREQPILNIIYGNTKNIDAPANATINTGIFSPQFDSFDMSHITLQADNEMDIGITPANSTSMASILPRSAQEEQHLVSVTTTTSMPEDNQSKQPRHLMVVSSMQSCPELSRPVQACPKYPKVIAKADTTDGLDIQSSDETMKENIKSESLLLDEKPTRILSHQCKICDKYFHKQSQLRTHKKTHALAMQEKPPKIELAPENESDNLLQCHMCSKSGLTAVALKDHLKTHRGAKEFQCTECPLKFCTNGGLSRHIKIHNNKVRWKCTTCDLTFQTKAQLSIHEEFHQNNTNLNTVEPDSSQKDPLTIDGNYLTHPEIQLENGSNLSEKVLMDDVTEKETDVKKEKKIYTNKCKYCPKTFRKPSDLVRHIRTHTGERPYQCEYCNKCFAVKCTLDCHMKVHTGKKTFSCHVCNSLFTTKGSLKVHMRLHTGSKPFKCSSCDLRFRTSGHRKVHLLTHMREHKDPSKPKPKPRKVAAIAEVAAELERTVEHGVNTDTAVPQPGEYPNLDSITIDTSTLTDNITPHITFNADGTILNNNAMLSINESNQLVANLHFLLANGLVTIQTDDALLQQLPDADSNSMEQTESLIVAPDMNESNPQAVLYETEGMPNADTESHGTLELNHCMEMGSPDEVASLSDIEENKAKLTIDKTQFRRGCDICGKTFLKPCQVERHKRIHTGERPYKCNLCSKSFTQKNTLKMHQKHHTGDRPHPCPHCDFSFTQKGNLKTHLKRVHQLDTLGIKKLRRGQHVLSAKFTQDNLDETRIIGLEDIAFANIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2