Aros007914.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Athalia rosae
Gene Symbol
ZNF236
Assembly
GCA_000344095.2
Location
NW:664575-679099[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 4.3e-06 0.00028 20.4 0.7 2 23 187 208 186 208 0.96
2 28 2.6e-05 0.0017 18.0 0.6 1 23 214 236 214 236 0.98
3 28 2.1e-06 0.00014 21.4 0.4 2 23 242 263 242 263 0.98
4 28 0.0054 0.36 10.7 0.2 3 23 271 291 269 291 0.96
5 28 5.2e-05 0.0034 17.0 1.0 2 23 302 323 302 323 0.98
6 28 6.8e-07 4.5e-05 22.9 1.0 1 23 344 366 344 366 0.99
7 28 1.2e-05 0.00076 19.1 0.6 1 20 372 391 372 394 0.94
8 28 3.4e-05 0.0022 17.6 0.9 1 23 400 423 400 423 0.95
9 28 1.1e-05 0.00075 19.1 3.7 1 23 432 455 432 455 0.98
10 28 7.1e-07 4.6e-05 22.9 1.1 1 23 569 591 569 591 0.98
11 28 1.6e-05 0.001 18.6 1.1 1 23 597 619 597 619 0.99
12 28 0.015 0.96 9.3 8.1 1 23 625 647 625 647 0.98
13 28 2.6e-06 0.00017 21.1 1.5 1 23 653 675 653 675 0.98
14 28 0.0042 0.27 11.0 3.9 1 23 730 752 730 752 0.98
15 28 2.6e-06 0.00017 21.1 3.7 1 23 758 780 758 780 0.99
16 28 2.7e-05 0.0018 17.9 2.0 1 23 786 808 786 808 0.98
17 28 7.6e-05 0.005 16.5 7.2 1 23 814 836 814 836 0.98
18 28 6.1e-06 0.0004 19.9 0.7 1 23 1159 1181 1159 1181 0.97
19 28 0.0045 0.29 10.9 1.8 2 23 1204 1225 1203 1225 0.97
20 28 2.2e-05 0.0014 18.2 0.3 1 23 1231 1253 1231 1253 0.97
21 28 0.0045 0.3 10.9 0.0 2 23 1260 1281 1259 1281 0.95
22 28 3.9e-08 2.5e-06 26.9 1.4 2 23 1349 1370 1348 1370 0.98
23 28 0.046 3 7.8 8.0 1 23 1376 1398 1376 1398 0.98
24 28 6.6e-05 0.0043 16.7 2.5 1 23 1404 1426 1404 1426 0.98
25 28 0.0002 0.013 15.2 2.7 1 23 1432 1454 1432 1454 0.99
26 28 0.0023 0.15 11.8 2.6 2 23 1670 1691 1670 1691 0.97
27 28 8.9e-05 0.0059 16.3 3.5 1 23 1697 1719 1697 1719 0.98
28 28 3e-06 0.0002 20.9 1.4 1 23 1725 1748 1725 1748 0.96

Sequence Information

Coding Sequence
ATGCTTTCGGAGCAGTCCATTCTCACCGAACAGTTACcaaataattctgaaaatatgcCTTTGGGATATATAATATCAGATGATGGCCGAACTCTACTGGCAGTCACAGagcgaGACGGTGGTGTCCTGGAATTTATGCCAGTACCAGTAACCATACAGCAAAACAACGTGATATCTGCTGGGCCATTGAAAACTAGTGAAGGAAATACCGTATTTCAAATAACTCTCGAGGGGATGGAAGACTCGACAGGTCAAGCAACCGCATCAGCTCTATTTCCAATGGAGAATTATCATTCCTTACCAATGGTTCAAGAAGAGGAGCAAGAGAGTTCTTATTCGCACAAGGAAATACTACTGGACGCTTCAAACACCATGCTTTTTACAGCAGCTGAGGAGTCCAGTGAGACTAGTAACTTAGATCCTAAGAATTTTGAACCATTCGAAACTCCATTACTTGAAGTTACACCTCCCTCACCTCCTCTTGTTCCGGTAAAAAGAACCCCAGGAAGACCCAGAAAAGACGGAAGCACGCCACCGGCAGCGcacCCCAACAActtaaaatgtaaaatatgcGGTAAGGGATTTACCAGACTCATGTTACTCCGAAGGCACCTCGAGCAACACGCGGAAGAAAAGCCCCATCGGTGTCCAAAGTGTCCCGCATCTTTCAACGTTCCtACTAATTTCACGCTTCATATGGCAACGCACAACATAGGTGAACCAAAGTGTCCAGAATGTGGGAGAAAGTTTGCGCGAATGGCCAGTCTGAAGTCCCATATGTTAATGcatgaaaaggaagaaaatcttttctgTACCGAGTGCGAAGACGCCTTCACGACAAAGGCCCAGTTAGACGCCCATTTGAAACTGCACAATGAGAAATGGACGACTGAGGATGTGAGAAAATGTAAACTTTGTAACAAACAGTTTACACAGCCAGCTCTTTACCGTTTACATATTCGTGAGCACTACAGATTACAAACTAAGCTGGTCaaacagacaaaaaaaggTGTCAAACAGAAGACCATGTACAAATGTAAAATATGTTTGAAATCCTTTCAAAAACCAAGTCAGCTTGTACGGCACATCAGGGTTCATACGGGGGAAAAACCCTTCCAGTGCACGATTTGTTCTCGAGCGTTCACACAAAAGGGATCTCTCCAAATACACATGTGGAAACACGATGGATTTAGACCGCATAATTGTAGCTCATGCAACGCGACATTTAGTCAAAAagGAAACCTGAACGCCCATATATTAAGGGTGCACAATGTGCCGGATGGAAAGCCTTATTACAAATGTACATACTGTCCGTGTACGTTTAAAAAGTTAGGAAGTCTTAATGctcatatgaaaaaaatgcactCGAACCCAGCAAAGAAACCACAAAACTGCGACAGCTCTACCGAAGACATGCAAGCCACCGTTGATACGGTCATGTCTCAGCTAGCGTTATTGGAATCAAGTGTGAAGAATCCAGAAGCAGATTCTACTGCAAACAAGCCACCTAATAAAGACATATTACAACAGGCTCTGAAGAACAGCGGATTGCCTAGCAAAGACAAAGATTCAAATAGTGGAGAACAAATACCGAAGAAAGGAGAGGCACAGACTACTATGGTAACCCTACTGGATAGCAGTATAGATAGTGATACAAGAAAATATGTTACGATAAAACAACGGTCTATAGGAAATATAAGATGGTACATGTGTTCCTACTGCTacaaagaattcaaaaaaccCTCAGATTTGATACGTCATTTGCGTATCCACACTCAGGAAAAGCCCTTCAAGTGTTCATATTGCTCTCGCTCTTTCGCCGTTAAATCGACAATGATTGCACACGAAAGAACCCATACTGGAgtcaaaaaatatatgtgttGTAATTGCAATAAAATGTTCGCCTGCCATAGCAGTTTAACAACGCACATGAGggTACATGCAGGCGTAAAACCTTTCACCTGCAGTATATGTGATAAATCATTTAGCGCTAATAATCTCCTGAAAAGTCACATGAAATATCATGCCAAGGGGAAGACAAAAGCTAGCCGCGAGGCCGAAGTTCTTGCGCCTTCGATCGTTCTTGAGGAACCATTGATAATAACGGATGCAGGGAATAAGATCAGTATTGCTCAAGTGCAATCGAAACATCAACAGGTTTATAATAGCAATGATGTTGCCAGACCCCATAAGTGTTGGGCTTGTACAGCTGCGTTCAGAAAAGTGAGTCACCTGAAACAGCATTTGCGGAGACACACCGGAGAACGACCGTACAAGTGCCAAAAATGCAACAGGAGGTTTACTTCAAACAGCGTTCTAAAATCGCATCTGCGAACACACGAAGGATCGAGACCTTTCAATTGTACAACCTGTAAtgctaaattttcaacgcaaaGCAGTATGAAACGTCACCTTGCGACACACAGTAATAAGAGACCTTTCATGTGCCCTTATTGTCACAAGACTTTCAAGACTTCTGTTAACTGCAGAAAACACATGAAGATCCATAAGCAAGAGCTTGCACAACAGCAATTGCATCAGCAACAGTCACAACAGCAGGAAGCTAATCAATTGggagaaaaaaccgaaattcaAGTGTTGCCCGAAAGTGTCGCGCTGCCCGGAAAAATGGAAGTTACTTTTCAACCTCAGATGGCACCTGATTTCTCACAAGCATTCTCGGACCAATTTCATACAATTAACATAGAAAAAGATAAGACCTTACACCCCCAGAATGATGAAATACAACCAATTAACAGTCAAACTTTACCAGCTGTTGAGTCTGTTAATTTAGGGTCTTCTCAGACCCTACATGCAGACGAGACAGGGACCATTACTTTGCCAAATTACTCTGGGGACCAGACTCTCACACCGGAAAGTATAAGAGAGATTGAAGAAACTCTCAACCAGCAACTCTTCAATATTGGCATGAATCTTGGTCTTGGAGGCACTCTGACAAGGCAGATAAATGAGACCTCATCCACCTCCTTGGAAGCCCGTGAACAACCTATCCTCaacataatttatgaaaatacaaagaacCTAGATTCCTCAACGGGTGCCACAATGAATACGGGAATGTTCGCGCCTCAATTCGAGTCTTTCGACATGAGTCATATCACACTTCAGGCGGATAACGAATTGGACATCGGTATTAATTCAGCGAATTCGACAAGCATGGCAAGTATTCTACCTCAGTCTGCCCAGGAAGAGCAGCATTTGGTATCTGTTACAACAACGACCTCTGCAACAGAGGACAATCAATCCAAGCAACCGAGACACTTGATGGTTGTTAGTTCCATGCAAACCTGCCCTGAATTATCTCGCCCAGTACAGGCATGCCCTAAATACCCAAAAGTCATAGCCAAAGCAGATACTACTGATGGCTTGGACATCCAGTGCTCGGAAGAAGCTGTTAAGGATATTAATAAATTGGAAACCTTGATACCTGAGAAAGTAGGCCAAGTTCTCTCCTACGCATGCGAAATCTGTGATAAAAGTTTTGATAAACAGATACAGCTAAGGAATCATAAGAAAATTCATACAACAACTAAGCAAAAATCTACCAAAAACTCTCTTATTCCTACTATCGAATCAGAGAATCTCCTGCAATGTCACATGTGTAGTAAATCTGGATTCACCACAGCTGCTCTGAAGGATCATCTGAAAACCCATCGAGGAACCAAAGAATTTCAGTGTACCGAATGCCCTTTGAGGTTTCGCACCAATGGAGGCCTTAGCAGACATGTGAAAGCTCACACAATTAAGCCCCAATGGAAATGTCCTACATGTGATTTGACATTCCAAAAAGAAGCGGAATTGATTATTCACGAAGAAGTTCATCAAAACACTACAGATTCGAGCCAAAAAATGGAACCTGATAGCTCTCAAAAAGCTCCATTAACAATAGATGGTACCTATCTAGCCCATCCGGAATTAGATTTAGGAAGTAATCCTACACTTTCAGAAAGAGTTTTCATGGATGCTGTAGCTGAGAAAGACATGgatCATGATTTAAAGAAGGATAAGAAAATCTATACAAACAAATGCAAATACTGTCCAAAAACCTTTCGCAAACCGAGTGATCTTGTGAGACATATAAGAACGCATACAGGAGAGAGACCTTACCAGTGTGAATATTGTAACAAATGTTTTGCCGTCAAGTGCACTTTGGACTGTCACATGAAGGTACATACTGGAAAAAAGACTTTCTCCTGCCACGTTTGTAACAGTCTTTTCACAACCAAAGGAAGCCTCAAAGTGCACATGCGATTACACACAGGTTCCAAGCCGTTCAAATGTCCTTCCTGCGATTTAAGATTCAGAACTTCGGGGCATAGAAAAGTTCACTTGTTAACTCATATGAGGGAGCACAAGAATCCTTCTAAGCCTAGGACGAAGGTACGTAAGGTTGCTGCTATTGCTGAGGTTGCTGCTGAACTCGAGAAGACTGTTCAAAGTGCTGTTAACACTGAGATAACAGCTCCTGAAGCCACAGAATTTCCAAATATTGACTCGATCACAATCGATGCTACTACTCTCACGGATAATATAACTCCGCATATTACTTTCAACGCTGATGGAACGATATTAAACAACAATGCAATGCTGTCAATAAATGAAAGTACTCAGCTCGTAGCCAATCTACATTTTCTTCTTGCTAATGGGCTCGTCACCATACAGACTGATGATGCTTTGTTAGAGCAATTACCTAATGGTGAGACTGATGTTATGGAAAATCACGCTACTGTTGATGGATTAATAGACACAGAAGCTTTAGTAAACGAGCCAACAGAAACTTTAATCAATAATCCCGAATTAGATGATTCGAATCCACAGGCAGTTTTATATGACACTGAGAACATATCAAATGTTGGCACTGAGTGTCACGCTACGCTTACTCTAGAACAATGCATGGAGATGGCAAACCCAGAAGCAATAGCTTTGCTGCCAGAAGCTAACAAGAGCAAACCAAAATCCACGGTCAACAAACTGCAGGTCAAAAGAGAGTGTGATGTTTGCGGAAAAACGTTCCTCAAACCGTGTCAAATGGAGAGACACAAGCGAACACATACTGGAGAAAGGCCTTACAAATGTGATTCATGTGAAAAGTCTTTTGCCCAGAAAAGTACGCTAACAATGCATGAGAAACATCATACAGGAGTCAGACCACATCCTTGCCCTGTTTGTGAATTTTCCTTCACTCAGAAAGGAAATTTAAAGACACATCTCAAGCGGGTTCACAGCCAATATAGCTTGCAATGA
Protein Sequence
MLSEQSILTEQLPNNSENMPLGYIISDDGRTLLAVTERDGGVLEFMPVPVTIQQNNVISAGPLKTSEGNTVFQITLEGMEDSTGQATASALFPMENYHSLPMVQEEEQESSYSHKEILLDASNTMLFTAAEESSETSNLDPKNFEPFETPLLEVTPPSPPLVPVKRTPGRPRKDGSTPPAAHPNNLKCKICGKGFTRLMLLRRHLEQHAEEKPHRCPKCPASFNVPTNFTLHMATHNIGEPKCPECGRKFARMASLKSHMLMHEKEENLFCTECEDAFTTKAQLDAHLKLHNEKWTTEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKLVKQTKKGVKQKTMYKCKICLKSFQKPSQLVRHIRVHTGEKPFQCTICSRAFTQKGSLQIHMWKHDGFRPHNCSSCNATFSQKGNLNAHILRVHNVPDGKPYYKCTYCPCTFKKLGSLNAHMKKMHSNPAKKPQNCDSSTEDMQATVDTVMSQLALLESSVKNPEADSTANKPPNKDILQQALKNSGLPSKDKDSNSGEQIPKKGEAQTTMVTLLDSSIDSDTRKYVTIKQRSIGNIRWYMCSYCYKEFKKPSDLIRHLRIHTQEKPFKCSYCSRSFAVKSTMIAHERTHTGVKKYMCCNCNKMFACHSSLTTHMRVHAGVKPFTCSICDKSFSANNLLKSHMKYHAKGKTKASREAEVLAPSIVLEEPLIITDAGNKISIAQVQSKHQQVYNSNDVARPHKCWACTAAFRKVSHLKQHLRRHTGERPYKCQKCNRRFTSNSVLKSHLRTHEGSRPFNCTTCNAKFSTQSSMKRHLATHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKQELAQQQLHQQQSQQQEANQLGEKTEIQVLPESVALPGKMEVTFQPQMAPDFSQAFSDQFHTINIEKDKTLHPQNDEIQPINSQTLPAVESVNLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGGTLTRQINETSSTSLEAREQPILNIIYENTKNLDSSTGATMNTGMFAPQFESFDMSHITLQADNELDIGINSANSTSMASILPQSAQEEQHLVSVTTTTSATEDNQSKQPRHLMVVSSMQTCPELSRPVQACPKYPKVIAKADTTDGLDIQCSEEAVKDINKLETLIPEKVGQVLSYACEICDKSFDKQIQLRNHKKIHTTTKQKSTKNSLIPTIESENLLQCHMCSKSGFTTAALKDHLKTHRGTKEFQCTECPLRFRTNGGLSRHVKAHTIKPQWKCPTCDLTFQKEAELIIHEEVHQNTTDSSQKMEPDSSQKAPLTIDGTYLAHPELDLGSNPTLSERVFMDAVAEKDMDHDLKKDKKIYTNKCKYCPKTFRKPSDLVRHIRTHTGERPYQCEYCNKCFAVKCTLDCHMKVHTGKKTFSCHVCNSLFTTKGSLKVHMRLHTGSKPFKCPSCDLRFRTSGHRKVHLLTHMREHKNPSKPRTKVRKVAAIAEVAAELEKTVQSAVNTEITAPEATEFPNIDSITIDATTLTDNITPHITFNADGTILNNNAMLSINESTQLVANLHFLLANGLVTIQTDDALLEQLPNGETDVMENHATVDGLIDTEALVNEPTETLINNPELDDSNPQAVLYDTENISNVGTECHATLTLEQCMEMANPEAIALLPEANKSKPKSTVNKLQVKRECDVCGKTFLKPCQMERHKRTHTGERPYKCDSCEKSFAQKSTLTMHEKHHTGVRPHPCPVCEFSFTQKGNLKTHLKRVHSQYSLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01414380;
90% Identity
iTF_00174472; iTF_00175221;
80% Identity
-