Pate015174.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phymatocera aterrima
Gene Symbol
ZNF236
Assembly
GCA_963170745.1
Location
OY720665.1:1067136-1084870[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.1e-05 0.0011 19.7 0.6 2 23 186 207 185 207 0.96
2 28 9.2e-05 0.0096 16.7 0.3 1 23 213 235 213 235 0.98
3 28 3.1e-06 0.00032 21.4 0.4 2 23 241 262 241 262 0.98
4 28 0.0079 0.83 10.7 0.2 3 23 270 290 268 290 0.96
5 28 7.5e-05 0.0079 17.0 1.0 2 23 301 322 301 322 0.98
6 28 9.9e-07 0.0001 22.9 1.0 1 23 343 365 343 365 0.99
7 28 1.3e-05 0.0013 19.4 0.4 1 20 371 390 371 393 0.94
8 28 4.9e-05 0.0051 17.6 0.9 1 23 399 422 399 422 0.95
9 28 1.7e-05 0.0017 19.1 3.7 1 23 431 454 431 454 0.98
10 28 6.1e-07 6.4e-05 23.6 1.4 1 23 567 589 567 589 0.99
11 28 2.3e-05 0.0024 18.6 1.1 1 23 595 617 595 617 0.99
12 28 0.08 8.4 7.5 8.1 1 23 623 645 623 645 0.98
13 28 7e-07 7.3e-05 23.4 0.8 1 23 651 673 651 673 0.98
14 28 0.00036 0.038 14.9 3.6 1 23 728 750 728 750 0.98
15 28 4.6e-06 0.00048 20.8 3.9 1 23 756 778 756 778 0.99
16 28 3.3e-05 0.0034 18.2 4.0 1 23 784 806 784 806 0.98
17 28 0.00011 0.012 16.5 7.2 1 23 812 834 812 834 0.98
18 28 4.3e-06 0.00046 20.9 3.5 1 23 1154 1176 1154 1176 0.98
19 28 0.2 21 6.2 2.1 2 23 1200 1221 1199 1221 0.97
20 28 1.3e-05 0.0014 19.4 1.4 1 23 1227 1249 1227 1249 0.99
21 28 0.0059 0.62 11.1 0.6 2 23 1256 1277 1255 1277 0.92
22 28 5.6e-08 5.9e-06 26.9 1.4 2 23 1344 1365 1343 1365 0.98
23 28 0.066 6.9 7.7 8.0 1 23 1371 1393 1371 1393 0.98
24 28 9.6e-05 0.01 16.7 2.5 1 23 1399 1421 1399 1421 0.98
25 28 0.15 16 6.6 6.3 1 23 1427 1449 1427 1449 0.98
26 28 0.0069 0.73 10.8 1.8 2 23 1644 1665 1644 1665 0.97
27 28 6.4e-05 0.0067 17.2 6.5 1 23 1671 1693 1671 1693 0.98
28 28 2.2e-06 0.00023 21.8 3.6 1 23 1699 1722 1699 1722 0.96

Sequence Information

Coding Sequence
ATGTTATCTGAGCAAGCGATTCTCACGGAGCAACTTGCCACAAATACGGAACCTATGCCGCTCGGCTTCATCATCTCTGACGATGGGCGGACCCTTCTTGCGGTCACAGaGCGTGAGGATGGCGTATTGGAGTTTATGTCTGTACCAGTGACTCTCCAACAAAGCAATGTTAACGGCATACCATCATCACCGCTGAAACCAAGCGAAGGAAATCcgatatttcaaataacgctCGAAGGAATGGGAGAAGACTTAACAGGGCAGACTACAGCCGCTCTTTTTCCAACCCAAGGATATCAAGGCATTCCCGTTGTCTCCGATGACATAGAATCTTCCATTGCAACAGAGAAACAAATTCAGCTAGATTCTCCCGGTAGTACTGTACTAATCACACCCGGCGGTGCAGAAACTAGTGTCTTGGAAACTAGAAGcttcgaaatatttgaagCTCCACCAGCTCTTCCTGTTTCTCCGCTACCTACGATCATAAAACGAAGTCCTGGCAGACCGAGAAAAGATGGAAGCAATCCACCGTCTGTTCATACGAATAATCTGAAATGTAAAATATGTGGACAAGGGTTTAACAGACAAATGCTACTGCGGAGACACATAGAACAACACGCAGAAGAGAAGCCGCATCGTTGTCCAAAGTGTCCTGCTTCTTTCAATGTACCTATTAATTTTACGCTTCATATGGCGACACACAATATAGGCGAACCAAAGTGTCCAGAATGTGGACGAAAGTTTGCTCGTATGGCAAGTCTGAAATCTCACATGCTGATGCACGAAAAGGAGGAGAATTTATTCTGTACTGAGTGCGAGGACGCTTTTACCACCAAGGCTCAATTGGATGCACATTTGAAACTGCACAATGAAAAATGGGCGACAGAAGATGTTAGGAAGTGTAAACTATGCAACAAACAGTTCACTCAGCCAGCTCTTTATCGTCTACATATTCGTGAGCACTATAGATTGCAAACGAAGTTAGTTAAGCAGACAAAGAAAGGCGTGAAACAGAAGACCATGTACAAATGTAAAATATGtttgaaatcatttcaaaAACCGAGTCAACTTGTACGCCATATCAGAGTTCATACCGGAGAAAAACCTTTTCAGTGTACAGTCTGCCCCCGAGCTTTCACGCAGAAAGGTTCTCTCCAAATACATATGTGGAAGCACAATGGTTTTAGACCGCACAATTGCAGTTCTTGCAACGCGACGTTCAGTCAAAAAGGAAATTTAAACGCTCATATATTACGAGTGCATAATGTGCCGGATGGGAAACCTTATTACAAATGCACTTATTGTCCATGTACTTTTAAAAAACTGGGTAGTCTTAATGcacatatgaaaaaaatgcattCAAATCCAGTTAAGAAACCACAAAGCTGCGACAGCTCAACCGAAGATATGCAAGCTACCGTCGACACAGTTATGTCTCAATTAGCCATGCTTGAGAATAGTGTTAAAAATCCAGCGGATTCTACAGCAAACAATGCTCCTAATAAAGATATACTACAACAGGCGTTGAAGAACAGCGGATTACCTAGCAAAGACAAAGATTCAGCTTcagGAGAACAAATTGCGAAGAAGGGAGAAGCGCACACGACTATGATCACGTTACTGGATAGCAGTATAGACAGTGATACTAGaaAATACGTTACGATAAAACAACGCACCATAGGAAATATTAGATGGTACACATGTTCCTACTGTTataaagaattcaaaaaaccATCCGATCTCATACGTCATTTACGTATTCACACACAGGAAAAACCATTCAAGtgCTCCTACTGTTCCCGATCGTTTGCTGTAAAATCAACTATGATAGCTCATGAAAGAACTCATACGGGAGTGAAAAAGTACATGTGCTGTAGCTGTAACAAAATGTTTGCATGTCACAGCAGTCTAACAACTCACATGAGAATTCACGCAGGAGTGAAGCCATTCAGTTGCAACATATGTGATAAATCGTTCTCAGCGAACACCCTCCTAAAAGCTCACATGAAATCTCATGCTAggggaaaaacaaaaccgagtccCCAAGCAGAAGTTCTTGTACCGTCTATAGTTCTCGAGGAGCCGTTGATCATAACAGATGCAGGGAATAAAATTAGCATCGCTCAAGTACAATCGAAACATCGACAAGTTTACAACAGCAACGATGTTGCCAGACCACATAAATGTTGGGTTTGTCCTGCTGCCTTCCGAAAAATTAGTCATTTGAAACAACATTATCGAAGGCACACAGGGGAACGACCATATAAATGCCAGAAATGCAACAGGAAATTCACGTCGAACAGTGTATTAAAATCTCATTTAAGAACACACGAGGGATCCAGACCTTTCAAATGTTCGATGTGTCatgcaaaattttcaacacaaaGTAGCATGAAACGGCATTTAGCTACGCACAGTGATGTAAGACCATTTATGTGTCCATACTGTCACAAAACTTTCAAGACTTCTGTTAATTGCAGAAAACATATGAAGATACATAAAAGCGAGCTTGCGCAGCAGCAGTTGCATCGACAACAGTCAACCCAGCTCACAGATAAACCAGGGATGACAGTTTTGTCGGAAAATATTGCACTTCACAATGAAATGGAAGTCACGTTCCAGCCACAAATGGCACCTGATTTTACACAAGCATTCTCCGATCAGTTTCACACAATTCCTATTGAAAAGGATAAAACGTCATTAATGTCTGAGAATAATCAGATAGAAACAATTGATAATAAAACATTACCGGTTGTCGAACCTGTTAATTTAGGACCCTCTCAAACTCTCCATGCGGATGAAACGGGGACTATAACGCTGCCCAATTATTCTGGAGATCAAACGCTGACGCCGGAGAGTATCCGAGAAATTGAAGAGACTTTGAATCAACAGCTATTTAATATCGGCATGAATCTTGGCCTGGGAGGTAATCTGACTAGGCAAATAAACGAAACTACTCCAAACCCTTTAGAGCAAAGAGAACAACcgatattgaatattatttatgaaaatccTAAGAATATCGACACCCCATCAAGCGGCACAATGAACACAGGGATATTTTCACCTCAGTTCGATTCCTTCGACATGAGTCACATTACTCTGCAGGCAGATAACGAAATGGACATCGGTATAACTCCAGCTAATTCAACAAGTATGGCGAGTATATTGCCTAGATCAGCTCAAGAAGAACAACATTTGGTATCGGTTACCACAACGACTTCAATCCCAGAAGATAATCAATCTAAACAGCCAAGACATTTGATGGTCGTTAGTTCCATGCAATCCTGTCCTGCATTATCTCGCCCTGTTCAAGCATGTCCAAAATATCCAAAAGTCATCGCTAAAGCAGATACGACCGATGGCTTGGACATACAATCGCCAGACGAAACTATTAAGGATATTAATAAACCTGAATCCTTAATCTTACCAGAAAAACCAGCGCAAATTATCTCGTACCAATGCAAAATCtgtgataaatattttaataaaCAAAGCCAGTTGAGGACTCACAAGAAGATTCACGCTTCAGCGGTTACAGAGAAACCTGCCGATATTGTACTCCCAGCAGCAACTGAACCTAATAATCTATTACAGTGCCATATGTGCAGTAAATCAGGACTCACCACCACTGCCTTAAAGGATCATTTGAAAACGCATAGAGGAATCAAAGAATTCCAGTGCACGGAATGTCCTTTGAAGTTTTGCACCAATGGAGGACTTAGCAGGCATATCAAAGTACATAACAACAAAACACAATGGAAATGTTCGACATGCGATTTAAcgtttcaaaataaaattcaattgaatattcatgaaGAATTTCATCAGAATGATACTACTAATTTAAATACGGTGGAACCAGATAGTTCCCAAAAAGATCCGTTAACTATAGACGGCAATTATCTAACTCATACTGAAatacaattggaaaataataatgtaatcgTTTCAGAAAAAGTTCTCATGGATACTGTAGCTGAGAAAGAAACGGAGatcaaaaaggagaaaaaagtttataCAAATAAGTGTAAATACTGTCCAAAGACTTTTCGAAAACCAAGCGATCTCGTAAGACATATAAGAACCCATACGGGGGAAAGACCCTATCAATGtgaatattgtaataaatGTTTTGCAGTTAAATGTACATTAGATTGTCACATGAAAGTACATactggaaaaaaaaccttctCGTGTCACGTTTGCAATAGTCTTTTTACAACCAAAGGCAGTCTCAAAGTTCACATGCGATTACATACAgGTTCTAAACCCTTCAAATGTTCATGCTGTGATTTACGATTCAGAACATCAGGGCACAGAAAAGTGCATTTGTTAACGCACATGAGAGAGCACAAGGATCCGTCGAAGTCAAAACCAAAGCCTCGCAAAGTTGCTGCAATTGCTGGAGTCGCTGCAGAATTGGAaaagaatgttgaaaattcaCTCAATTCTGCGAGATCGATTCCTCAGACGGATGACTATGAGAATATTGATTCAATTACAATTGAAACGAATAATTTAACAGAAAATATCACTCCTCATATTACTTTTAATGCCGATGGAACGATCTTGAATAACAATGCGATGTTATCTATAAACGAGAGTAATCAGCTTGTAGCTAATCTACATTTTCTTCTTGCTAATGGACTCGTTACAATTCAAACTGACGAAGCACTCCTGCAACAATTACCTGAAGCTCAGTCAAATGCGATAGAACAAACAGAATCATTGACCGTTGAGcctgaaatgaatgaaacaaatGCTCGGGCGGTTTTATATGAAGCAGAAAATATGGAAAGCGGAGAAACCGAGACCCATGGAACTTTGGGATTGGATAATTGCGTGGAAATGGAAATCGCATCTCTATCTGATATCGAAGGGAATAAGACTAAACTAGCAAATGATAAAGCACAGTTTAGGAGAAGCTGCGATATCTGCGGAAAAACTTTTCTTAAACCTTGTCAAGTCGAACGACACAAGAGAATACACACGGGAGAACGACCCTATAAATGTAATTTATGCTCCAAATCTTTTACCCAAAAGAATACTTTGAAAATGCATCAGAAACATCATACTGGGGACAGACCGCATCCCTGTCCGCACtgcgatttttcattcactcaGAAAGGAAATCTGAAAACTCATCTCAAACGTGCGCATCAATTAGATACTTtagagataaagaaaatacgCAGAGGACAAGGTCAGCATGTTCTTAGTGCTAAATTTACTCACGATAATAATTTAGATGAGAGTAGAATAATTGGCTTGGAAGATATTTCCTTCCCCAATATTCCTTGA
Protein Sequence
MLSEQAILTEQLATNTEPMPLGFIISDDGRTLLAVTEREDGVLEFMSVPVTLQQSNVNGIPSSPLKPSEGNPIFQITLEGMGEDLTGQTTAALFPTQGYQGIPVVSDDIESSIATEKQIQLDSPGSTVLITPGGAETSVLETRSFEIFEAPPALPVSPLPTIIKRSPGRPRKDGSNPPSVHTNNLKCKICGQGFNRQMLLRRHIEQHAEEKPHRCPKCPASFNVPINFTLHMATHNIGEPKCPECGRKFARMASLKSHMLMHEKEENLFCTECEDAFTTKAQLDAHLKLHNEKWATEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKLVKQTKKGVKQKTMYKCKICLKSFQKPSQLVRHIRVHTGEKPFQCTVCPRAFTQKGSLQIHMWKHNGFRPHNCSSCNATFSQKGNLNAHILRVHNVPDGKPYYKCTYCPCTFKKLGSLNAHMKKMHSNPVKKPQSCDSSTEDMQATVDTVMSQLAMLENSVKNPADSTANNAPNKDILQQALKNSGLPSKDKDSASGEQIAKKGEAHTTMITLLDSSIDSDTRKYVTIKQRTIGNIRWYTCSYCYKEFKKPSDLIRHLRIHTQEKPFKCSYCSRSFAVKSTMIAHERTHTGVKKYMCCSCNKMFACHSSLTTHMRIHAGVKPFSCNICDKSFSANTLLKAHMKSHARGKTKPSPQAEVLVPSIVLEEPLIITDAGNKISIAQVQSKHRQVYNSNDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCNRKFTSNSVLKSHLRTHEGSRPFKCSMCHAKFSTQSSMKRHLATHSDVRPFMCPYCHKTFKTSVNCRKHMKIHKSELAQQQLHRQQSTQLTDKPGMTVLSENIALHNEMEVTFQPQMAPDFTQAFSDQFHTIPIEKDKTSLMSENNQIETIDNKTLPVVEPVNLGPSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGGNLTRQINETTPNPLEQREQPILNIIYENPKNIDTPSSGTMNTGIFSPQFDSFDMSHITLQADNEMDIGITPANSTSMASILPRSAQEEQHLVSVTTTTSIPEDNQSKQPRHLMVVSSMQSCPALSRPVQACPKYPKVIAKADTTDGLDIQSPDETIKDINKPESLILPEKPAQIISYQCKICDKYFNKQSQLRTHKKIHASAVTEKPADIVLPAATEPNNLLQCHMCSKSGLTTTALKDHLKTHRGIKEFQCTECPLKFCTNGGLSRHIKVHNNKTQWKCSTCDLTFQNKIQLNIHEEFHQNDTTNLNTVEPDSSQKDPLTIDGNYLTHTEIQLENNNVIVSEKVLMDTVAEKETEIKKEKKVYTNKCKYCPKTFRKPSDLVRHIRTHTGERPYQCEYCNKCFAVKCTLDCHMKVHTGKKTFSCHVCNSLFTTKGSLKVHMRLHTGSKPFKCSCCDLRFRTSGHRKVHLLTHMREHKDPSKSKPKPRKVAAIAGVAAELEKNVENSLNSARSIPQTDDYENIDSITIETNNLTENITPHITFNADGTILNNNAMLSINESNQLVANLHFLLANGLVTIQTDEALLQQLPEAQSNAIEQTESLTVEPEMNETNARAVLYEAENMESGETETHGTLGLDNCVEMEIASLSDIEGNKTKLANDKAQFRRSCDICGKTFLKPCQVERHKRIHTGERPYKCNLCSKSFTQKNTLKMHQKHHTGDRPHPCPHCDFSFTQKGNLKTHLKRAHQLDTLEIKKIRRGQGQHVLSAKFTHDNNLDESRIIGLEDISFPNIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01414380;
90% Identity
-
80% Identity
-