Acor012069.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Athalia cordata
Gene Symbol
ZNF236
Assembly
GCA_963932425.1
Location
OZ010627.1:17797574-17811144[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.2e-05 0.001 19.4 0.7 2 23 187 208 186 208 0.96
2 28 3.6e-05 0.003 18.0 0.6 1 23 214 236 214 236 0.98
3 28 2.9e-06 0.00024 21.4 0.4 2 23 242 263 242 263 0.98
4 28 0.0075 0.62 10.7 0.2 3 23 271 291 269 291 0.96
5 28 7.1e-05 0.0059 17.0 1.0 2 23 302 323 302 323 0.98
6 28 9.4e-07 7.8e-05 22.9 1.0 1 23 344 366 344 366 0.99
7 28 1.6e-05 0.0013 19.1 0.6 1 20 372 391 372 394 0.94
8 28 4.6e-05 0.0038 17.6 0.9 1 23 400 423 400 423 0.95
9 28 1.6e-05 0.0013 19.1 3.7 1 23 432 455 432 455 0.98
10 28 2.7e-07 2.2e-05 24.7 2.8 1 23 568 590 568 590 0.99
11 28 2.2e-05 0.0018 18.6 1.1 1 23 596 618 596 618 0.99
12 28 0.02 1.7 9.3 8.1 1 23 624 646 624 646 0.98
13 28 3.5e-06 0.00029 21.1 1.5 1 23 652 674 652 674 0.98
14 28 0.051 4.2 8.1 4.8 1 23 729 751 729 751 0.97
15 28 4.3e-06 0.00036 20.9 3.9 1 23 757 779 757 779 0.99
16 28 3.7e-05 0.0031 17.9 2.0 1 23 785 807 785 807 0.98
17 28 0.0001 0.0087 16.5 7.2 1 23 813 835 813 835 0.98
18 28 1.4e-05 0.0012 19.2 1.3 1 23 1158 1180 1158 1180 0.98
19 28 0.0061 0.51 10.9 1.8 2 23 1203 1224 1202 1224 0.97
20 28 1.2e-05 0.00096 19.5 0.4 1 23 1230 1252 1230 1252 0.98
21 28 0.0059 0.49 11.0 0.3 2 23 1259 1280 1258 1280 0.95
22 28 5.3e-08 4.4e-06 26.9 1.4 2 23 1348 1369 1347 1369 0.98
23 28 0.063 5.2 7.8 8.0 1 23 1375 1397 1375 1397 0.98
24 28 9.1e-05 0.0075 16.7 2.5 1 23 1403 1425 1403 1425 0.98
25 28 0.00028 0.023 15.2 2.7 1 23 1431 1453 1431 1453 0.99
26 28 0.0032 0.26 11.8 2.6 2 23 1668 1689 1668 1689 0.97
27 28 0.00012 0.01 16.3 3.5 1 23 1695 1717 1695 1717 0.98
28 28 3.8e-06 0.00031 21.0 1.2 1 23 1723 1746 1723 1746 0.96

Sequence Information

Coding Sequence
ATGCTTTCGGAGCAGTCAATTCTCACTGAACAGTTACCAACTAATTCAGAAAATATGCCTCtgggatatataatatcagatGATGGTCGAACTCTGCTGGCAGTCACAGaGCGAGACGGTGGTGTCCTGGAGTTTATGTCAGTGCCAGTAACAATACAGCAAAACAACGTGATATCTGCTGGGCCATTGAAAACCAATGAAGGAAATACCGTATTTCAAATAACTCTTGAGGGAATGGAAGACTCAACAGGCCAAACAACCGCAGCAACTCTGTTTCCaactgaaaattatcattcctTACCAGTGGTTCAAGAAGAGGATCAAGAGAGTTCTTATACGCACAAAGAAGTACTACTGGACCCTTCGAATACCATGCTTTTTACACCTGCTGAGGGTTCCAATGAAGCTAGTAACTTAGAACCTAAGGGTTTTGAAACATTTGAAGCTCCATTACCTGAAGTCGTACCTCCTTCACCTCCTCCTGCTCCAGTAAGAAGAACTCCAGGCAGACCCAGGAAAGATGGAAGCACGCCACCATCAGCAcatCCCAACAAcctgaaatgtaaaatatgtgGTAAGGGATTTAACAGACTCATGTTACTCCGAAGGCATCTAGAACAACATGCAGAAGAAAAGCCGCATCGGTGTCCGAAGTGTCCCGCATCTTTCAACGTTCCTACTAATTTCACGCTTCATATGGCAACGCACAACATAGGTGAACCAAAGTGTCCAGAATGTGGGAGAAAGTTTGCCCGAATGGCGAGTCTAAAGTCCCACATGTTGATgcatgaaaaagaagaaaatcttttCTGTACCGAGTGCGAGGATGCATTCACAACAAAGGCCCAGTTAGACGCCCATTTGAAACTGCACAATGAGAAATGGGCGACTGAGGATGTGAGAAAATGTAAACTTTGTAACAAACAGTTTACACAGCCAGCTCTTTACCGTTTACATATTCGTGAACACTACAGATTACAAACGAAGCTGGTcaaacagacaaaaaaaggTGTCAAACAGAAGACCATGTACAAATGTAAAATATGCTTGAAATCCTTTCAAAAACCAAGTCAGCTCGTACGGCACATCAGGGTTCATACGGGGGAAAAACCCTTCCAGTGCACGATTTGTTCTCGAGCATTCACACAAAAAGGATCTCTCCAAATACACATGTGGAAACACGACGGATTTAGACCGCATAATTGTAGCTCATGCAACGCGACATTTAGCCAAAAagGAAACCTGAACGCCCATATATTAAGGGTGCACAATGTGCCGGATGGAAAGCCTTACTACAAATGTACATACTGTCCATGTACGTTTAAAAAGTTAGGGAGTCTTAATGctcatatgaaaaaaatgcactCGAATCCAACAAAGAAACCGCAAAACTGTGACAGCTCTACCGAAGATATGCAAGCTACCGTTGATACGGTCATGTCTCAGCTGGCGTTATTGGAATCAAGTGTCAAGAATCCAGAAGCAGATTCCACTGCAAACAATTCATCTAATAAAGACATCTTACAACAAGCTTTGAAGAACAGCGGCTTGCCTAGCAAAGACAAAGATTCTAACAGTGAACAAATTCCGAAGAAAGGAGAAGCACAGACTACTATGGTAACCCTATTGGATAGCAGTATAGATAGCGATACaagAAAATATGTTACGATAAAACAACGGTCTATAGGAAATATAAGATGGTACACGTGTTCCTACTGCCacaaagaattcaaaaaacccTCAGATTTGATACGTCATTTGCGTATTCACACTCAGGAAAAGCCCTTCAAGTGTTCTTATTGCTCTCGCTCTTTCGCCGTTAAATCAACAATGATTGCACACGAAAGAACGCATACCGGAgttaaaaaatacatgtgtTGTAATTGCAATAAAATGTTTGCCTGTCATAGCAGTTTGACAACACATATGAGagtaCATGCAGGCGTGAAACCTTTCACCTGCAGTATATGTGATAAATCATTTAGTGCCAATAATCTCCTAAAAAGTCACATGAAATATCATGCCAAGGGAAAGACAAAAGCTAGCCGTGAGGCCGAAGTTCTCGCCCCTTCAATCGTGCTTGAGGAACCATTGATAATAACGGATGCAGGGAATAAGATTAGTATCGCTCAAGTGCAATCGAAACACCAACAGGTTTACAATAGCAACGATGTTGCCAGACCCCATAAATGTTGGGCTTGTACAGCTGCGTTTAGAAAAGTGAGCCACCTGAAACAGCATTTTCGGAGACACACCGGAGAACGACCATACAAGTGCCAAAAATGCAACAGgaAGTTTACTTCTAACAGCGTTCTAAAATCTCATCTGCGAACACACGAAGGATCTAGACCTTTCAATTGTACAACGTGCAATGCTAAATTTTCGACACAAAGCAGTATGAAACGTCACCTCGCAACGCACAGTAATAAAAGACCTTTTATGTGCCCTTACTGTCATAAAACTTTCAAGACTTCTGTCAACTGCAGAAAACACATGAAAATTCATAAGCAGGAGCTTGCACAACAGCAATTGCATCAGCAACAGTCACAACAGCAGGAACCTAATCAATTGGGAGAAAAAGCAGGAATTCAAGTATTGCCCGAAACTGTTGCGCTGCctgaaaaaatggaagttaCTTTTCAACCGCAGATGGCACCTGATTTTTCACAAGCATTTTCTGACCAATTTCATACAATCAGCATGGAAAAAGACAAGACATTACATCCCCAGAATGATGAAATGCAACCAATTAGCAGTCAAACTTTACCAGCTGTTGAGTCTGTTAACTTAGGGTCTTCTCAGACCCTACATGCAGACGAGACGGGGACTATTACTTTGCCAAATTACTCTGGGGACCAGACTCTCACACCGGAAAGTATAAGAGAGATTGAAGAAACTCTCAACCAGCAACTCTTCAATATCGGCGTGAATCTTGGTCTTGGGGGCACTCTGACGAGGCAGATGAATGAGACCTCGTCCACCTCCCTGGAATCCCGTGAACAACCCATCctcaatataatttatgaaaatacgAAGAACCTGGACTCGTCAACGGGTGCTACAATAAACAGTGGAATGTTTGCGCCCCAATTTGAGTCCTTTGACATGAGTCATATTACACTTCAGGCGGATAACGAAATGGACATTGGTATTACTCCAGCGAACTCGACAAGCATGGCAAGTATTCTACCACAATCTGCTCAGGAGGAACAGCATTTGGTATCTGTTACGACAACGACTTCTGTAACAGAGGATAATCAATCCAAGCAACCGAGACACTTGATGGTTGTTAGTTCCATGCAAACCTGCCCTGAATTATCTCGCCCAGTGCAGGCATGTCCGAAATATCCAAAAGTCATAGCTAAAGCAGATACTACTGATGGGTTGGACAGCCAGTGCTCGGAAGAAACTGTTAAGAATATTGATAAATTGGAAACCTCGACACCTGAAAAAGTAGGCCAAGTTCTCTCCTACACATGTGAAAtctgtgataaaaattttgataaacaaATACAGCTGAGGAATCATAAGAAAATTCATGCAACAACTAAGCAAAAATCTACCAAAAACTCTCTTACTCCTGGTACCGAATCAGAGAACCTCTTGCAATGTCACATGTGTAGTAAATCTGGATTCACCACAGCTGCTTTGAAGGATCATCTCAAAACTCATAGAGGAACCAAAGAATTTCAGTGTACCGAATGCCCTTTGAGGTTCCGCACTAATGGAGGGCTCAGCAGACATGTGAAAGTTCACACAAATAAGCCacaATGGAAGTGTCATACTTGTGATCTAACGTTTCAAAAAGAAGCGGAATTGATAGTTCACGAAGAAGTTCATCGGATCAATGCAGATTCGAGCCCAAAAATGGAACCTGATAGCTCTCAAAAAGCTCCATTAACAATAGACGGTACCTACCTAGCCCATCCGGAATTAGATTTAGGAAGTAATCCTACGCTCTCAGAAAGAGTTTTTATGGATGCTGTAGCTGAGAAAGATATGgaTCATGATTTGCAAAAGGATAAGAAAATCTATACAAACAAATGCAAATACTGTCCAAAAACCTTTCGCAAACCGAGTGATCTTGTGAGACATATAAGAACGCATACAGGGGAGAGACCTTACCAGTGTGAATATTGTAACAAATGTTTTGCTGTCAAGTGTACCTTGGACTGTCACATGAAGGTACATACCGGGAAAAAGACCTTTTCCTGCCACGTTTGTAACAGCCTTTTCACAACCAAAGGTAGCCTCAAAGTGCACATGCGATTACACACAGGTTCCAAGCCGTTCAAATGTCCTTCCTGCGATTTAAGATTCAGAACTTCGGGGCATAGGAAAGTTCACTTGTTAACTCACATGAGGGAGCACAAGAATCCGTCTAAGACTAGGACAAAGATACGTAAGGTTGCTGCTATTGCTGAGGTTGCTGCTGAACTGGAGAAGACTGTTCAAAATGCTGTTAATACTGAGATAGCAGCTCCTGAAGCCACCGAATTTCCAAATATTGACTCGATCACAATCGATGCTACTACTCTCACGGACAATATAACTCCGCATATAACTTTTAACGCTGATGGAACGATATTAAACAACAACGCAATGTTGTCAATAAATGAAAGTACTCAGCTCGTAGCTAATCTACATTTCCTTCTTGCTAACGGGCTCGTCACTATACAGACTGATGATGCTTTGTTAGAGCAACTACCTAATGGTGAGACTGATGTTATGGAAAATCACGCTTCTGTTGATGGATTAATAGATACAGAAGCTCTAGTAGGAGAGCCAACCGCaactttaattaataattctgaATTAGATGATTCAAATCCACAGGCAGTTTTATATGACACTGAGAACATATCAAACGTTAACACTGAGTCTCATGCTACGCTTACTCTAGAACAATGCATGGAGATGGCAAACCCAGAAATTGCTTCGCTGCCTGATGCTATTAGGAGCAAACCAAAATCTGCGGTTAACAAACTGCAGCTCAAAAGAGAGTGTGATGTTTGTGGAAAAACGTTCCTCAAACCATGTCAAATGGAGAGACACAAGCGAACCCACACCGGAGAAAAGCCTTACAAATGTGATTCCTGCGAAAAGTCTTTTGCACAGAAAAGTACGCTAACCATGCATGAGAAACATCATACAGGAGTCAGACCACATCCTTGCCCTGTTTGTGAATTCTCCTTCACTCAGAAAGGAAATCTAAAGACGCATCTCAAGCGGGCTCACAGTCAATATAGCTTGCAATAA
Protein Sequence
MLSEQSILTEQLPTNSENMPLGYIISDDGRTLLAVTERDGGVLEFMSVPVTIQQNNVISAGPLKTNEGNTVFQITLEGMEDSTGQTTAATLFPTENYHSLPVVQEEDQESSYTHKEVLLDPSNTMLFTPAEGSNEASNLEPKGFETFEAPLPEVVPPSPPPAPVRRTPGRPRKDGSTPPSAHPNNLKCKICGKGFNRLMLLRRHLEQHAEEKPHRCPKCPASFNVPTNFTLHMATHNIGEPKCPECGRKFARMASLKSHMLMHEKEENLFCTECEDAFTTKAQLDAHLKLHNEKWATEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKLVKQTKKGVKQKTMYKCKICLKSFQKPSQLVRHIRVHTGEKPFQCTICSRAFTQKGSLQIHMWKHDGFRPHNCSSCNATFSQKGNLNAHILRVHNVPDGKPYYKCTYCPCTFKKLGSLNAHMKKMHSNPTKKPQNCDSSTEDMQATVDTVMSQLALLESSVKNPEADSTANNSSNKDILQQALKNSGLPSKDKDSNSEQIPKKGEAQTTMVTLLDSSIDSDTRKYVTIKQRSIGNIRWYTCSYCHKEFKKPSDLIRHLRIHTQEKPFKCSYCSRSFAVKSTMIAHERTHTGVKKYMCCNCNKMFACHSSLTTHMRVHAGVKPFTCSICDKSFSANNLLKSHMKYHAKGKTKASREAEVLAPSIVLEEPLIITDAGNKISIAQVQSKHQQVYNSNDVARPHKCWACTAAFRKVSHLKQHFRRHTGERPYKCQKCNRKFTSNSVLKSHLRTHEGSRPFNCTTCNAKFSTQSSMKRHLATHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKQELAQQQLHQQQSQQQEPNQLGEKAGIQVLPETVALPEKMEVTFQPQMAPDFSQAFSDQFHTISMEKDKTLHPQNDEMQPISSQTLPAVESVNLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGVNLGLGGTLTRQMNETSSTSLESREQPILNIIYENTKNLDSSTGATINSGMFAPQFESFDMSHITLQADNEMDIGITPANSTSMASILPQSAQEEQHLVSVTTTTSVTEDNQSKQPRHLMVVSSMQTCPELSRPVQACPKYPKVIAKADTTDGLDSQCSEETVKNIDKLETSTPEKVGQVLSYTCEICDKNFDKQIQLRNHKKIHATTKQKSTKNSLTPGTESENLLQCHMCSKSGFTTAALKDHLKTHRGTKEFQCTECPLRFRTNGGLSRHVKVHTNKPQWKCHTCDLTFQKEAELIVHEEVHRINADSSPKMEPDSSQKAPLTIDGTYLAHPELDLGSNPTLSERVFMDAVAEKDMDHDLQKDKKIYTNKCKYCPKTFRKPSDLVRHIRTHTGERPYQCEYCNKCFAVKCTLDCHMKVHTGKKTFSCHVCNSLFTTKGSLKVHMRLHTGSKPFKCPSCDLRFRTSGHRKVHLLTHMREHKNPSKTRTKIRKVAAIAEVAAELEKTVQNAVNTEIAAPEATEFPNIDSITIDATTLTDNITPHITFNADGTILNNNAMLSINESTQLVANLHFLLANGLVTIQTDDALLEQLPNGETDVMENHASVDGLIDTEALVGEPTATLINNSELDDSNPQAVLYDTENISNVNTESHATLTLEQCMEMANPEIASLPDAIRSKPKSAVNKLQLKRECDVCGKTFLKPCQMERHKRTHTGEKPYKCDSCEKSFAQKSTLTMHEKHHTGVRPHPCPVCEFSFTQKGNLKTHLKRAHSQYSLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01414380;
90% Identity
iTF_00175887;
80% Identity
-