Tlur019998.2
Basic Information
- Insect
- Tachina lurida
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_944452685.1
- Location
- CALYBZ010001139.1:662299-682796[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.91 1.6e+04 -4.2 15.6 28 115 28 111 12 117 0.59 2 5 0.15 2.6e+03 -1.7 1.8 164 199 178 221 138 240 0.51 3 5 0.19 3.2e+03 -2.0 7.3 22 75 272 326 267 360 0.51 4 5 1e-115 1.8e-111 373.2 26.4 1 299 400 696 400 697 0.93 5 5 0.15 2.6e+03 -1.7 3.7 220 245 725 750 700 771 0.47
Sequence Information
- Coding Sequence
- ATGGATACTACAAGTGCAGTAGGCCGGCGTCGTGTAAATTCGCGTGTCAATGCCGAGGATCAAGCTTTGGATCAAATAGCAAAAGAGAAAAAAAAAGAATCGTTAGTTAAAATGTCAGTGGAACAAAAATTAACTGATAAAAATGTTGTTGTATCTACAACAACATCAACAACAACCGCAAACTCGGGTTCAACCAAATCTAATAAAAAGAACCAAAATAACAATAACAACAACAAGAGTAGTAAGAAATTTATTAAAAAAGCATTGAAAATTTCAAAAAATAAAAAGCATGCAAACGTCACAAATGCCAACAACAAGAACAACAACAGCAACAACAACAGTAATACTACTAACAGAAGCAGCGGCAGCAGCAACTGCGGCAACAACAATGTTGAAGTGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTTGCGATAATGACTTAAACGAGTTCGACCATATAAAAAACGAAGACGAAATTAGCAAGAACAATAACAACTCAGTTGCTAGTGCAGAGCTTTTAACTGAAGGCAGCCATAAATTAAAGGAAAGTGATGAAATTGATAAAAGTTCTGAGGTGCAATTGCAAAATATGACAATTAATAATAATAATAATACCAATAATCAAAATAACGATGAAGCTGAAGAAAAACAAGAACCACAGGTGGAACTAGTATCGTTATCTGCGCCTAATGATAACATTGATAAACAAAGCGAAGACATCCCAAAAGACAATGAAATAGTCACGACGAAAATTTCCTCAATAACAAATAATATAATTAGCGTAGGAGGAAATGTGAATAAAAGCGAAATCGATAAAAGTCAACAAGAAGTAGAATCATTTGAATCAGAAAAAAGCACTGAGGAGAAAGAAGAAACTAACAATGACTCTAGTAGCGCTATCGTACAAATCTCCAATAGTTCCATTGTTAGCGAGCATTCATCGAGCTCTGAGGCTGTCAACAATGACAACAAATTGCCAACATCTTCAGACATAAAGTCTCTGAAAGCTAACGATGCTTCTGAGGCGTCGTCGTTGTCTTTGATTGATATTAAAGAAGTTGCTTGCAGCAAAGAAAATTGTAACAATACTCTAAATAATGATGATGGCAATGATGATGAAAATGTTGATGAGTGTGCCGAACCATATGATGAACTCTTAGTGCAATTCCTCGATGAAGCCAATCAGATTGCTGAGGCTAGGTTAGCTGCTAGACGGCACGCTAGAGCGGAAGCTCGGGAAATACGTATGCGAGAATTAGAACGACAGCAAAAGGAACAAGAATCTAATGCAGATCGTGTTTTCGATATGCATTCAACCGTAACTGGAATTACGCCATTGTCACACATGCGTCTGGGCTTGGGGAGTTCACCCGTTACAGGTTTACTAAACTCGACAAGAGCCAACTCCATGTCATCGAGACGCAGCAGTGAAGATTCTTTAGAAGAGGAAGGCCGCAGTTTAAGGGATATACGTCATGAGTTAAAGGATGTTGAAGAACGGTTTCGCAAGGCTATGATAGCAAATGCTCAGTTGGATAATGATCGTGCCTCACAAACGTATCAAATACAGTTGCTGAAAGACAAACTGGAAGATATGGAAGAATCATATTCACAATTACAGCGTGAATGCAAGGAAAAGACACGCGACTGTAATGCCTTGAAACGATCATTGGATAAGCTAAGCGAAGAGCTTAAATTGGTACAGGGTCAGCTAAATGAGCGTGACACACTGATAGCAGAACAAGGTTTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCACTGTTGAAAATGCACAATTATTGGGCTCGGTACAAGGGTCGTTAGATGTGCGGCTTAAGAAATTCAGCGAAGAGAAACATCAACTGCAGTCCGAAGTTCAGCACTTGCAGGAACAATTAGAATCATATAAAAGTCAGGGCAAAGGTCGAGGTAAAGGCAATTCTTCTAATGGTCCTTTAGGCTCGGATGATGATGATTATGAAGCTCAAAGAGAAGCCAATAAAATCATAATGGACTATAAATATAAGTTACAAAAAGCTGAACAGGAAATAGCTAGTCTTCAATCAAGCTTAGCACGTTCTGAAACGCAGGTTATACGTTACAAAAGTACTGCTGAAGCTGCCGAGAAAGCTGAGGCCGAACTTAAAATCGAAAGAAGGAAACTGCAAAGAGAGAATCGCGAAGCAATGGAAAAGCTTGAAGAGCTAGAAACATCAAATAATCATCTTCTGAAACGTTTGGACAAATTAAAGAATGCCAAAAGCGCTTTACTAAAAGATCTCTGA
- Protein Sequence
- MDTTSAVGRRRVNSRVNAEDQALDQIAKEKKKESLVKMSVEQKLTDKNVVVSTTTSTTTANSGSTKSNKKNQNNNNNNKSSKKFIKKALKISKNKKHANVTNANNKNNNSNNNSNTTNRSSGSSNCGNNNVEVANDEIIEELFDFCDNDLNEFDHIKNEDEISKNNNNSVASAELLTEGSHKLKESDEIDKSSEVQLQNMTINNNNNTNNQNNDEAEEKQEPQVELVSLSAPNDNIDKQSEDIPKDNEIVTTKISSITNNIISVGGNVNKSEIDKSQQEVESFESEKSTEEKEETNNDSSSAIVQISNSSIVSEHSSSSEAVNNDNKLPTSSDIKSLKANDASEASSLSLIDIKEVACSKENCNNTLNNDDGNDDENVDECAEPYDELLVQFLDEANQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGSSPVTGLLNSTRANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVTVENAQLLGSVQGSLDVRLKKFSEEKHQLQSEVQHLQEQLESYKSQGKGRGKGNSSNGPLGSDDDDYEAQREANKIIMDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01074472; iTF_00741871; iTF_01398481; iTF_01397428; iTF_01138006;
- 90% Identity
- iTF_01074472; iTF_01398481; iTF_01397428;
- 80% Identity
- -