Tfer034365.1
Basic Information
- Insect
- Tachina fera
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_905220375.1
- Location
- LR999966.1:119882715-119898844[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.77 3.6e+04 -5.0 13.7 46 115 7 76 1 82 0.66 2 5 0.081 3.8e+03 -1.8 2.8 237 280 144 185 116 224 0.66 3 5 0.025 1.2e+03 -0.1 5.3 22 90 251 321 236 330 0.69 4 5 2.3e-116 1.1e-111 374.3 26.9 1 299 367 663 367 664 0.93 5 5 0.073 3.4e+03 -1.6 3.7 220 245 692 717 667 738 0.47
Sequence Information
- Coding Sequence
- ATGTCAGTGGAACAAAAATTAACTGATAAAAATGTTGTGtctacaacaacagcaacaacaaccgCAAACTCGGGTTCAACCAAATCCAATAAAAAGAaccaaaataataacaacaacaataacaacagcaagagtagtaagaaatttattaaaaaagcattgaaaatttcaaaaactaaaaagcatGCAAACATTACTAATgccaacaacaagaacaacaacaacaacaataaaagcaaTACTACTAACAGAAGCAGCGGCAGCAGCAACTgcggcaacaacaacaatgttgAAGTGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATAATGATTTAAAAGAGCTCGACCATATAAAAAACGAAGACGAAATTAGCAAGAACAATAGCAATTCAATTGCTAGTGGAGAGCTTTTAACTGAAGGCAGccataaattaaaggaaaatgaGGAAGTTGATAAAAATAATTCCGAGTTGCAATTGCAAAATATGACAACTAATAATAATACCAATAATCAAAATAACGATGAAGCTGAAAGAAAAGAAGAACAACAGGTGGAACTAGTATTGTTATCTTCGCCTAATGATAACATAGATAAACAAAGCGAAGACATCCCAAAAGACAATGAATTAGTCACGACGACAATTTCATCAATAACAAATAACATAATTAGCGTAGAAGGAAATGTGGATAAATGCGAAATCGATAAAAGTCAACAAGAAGTAGAATCATTTGAATCAGAAAAAAGCACTCAGAAGAAAGAAGAAACTAACAATGATGACTCTAGTAGCGCTATCGTACAAATCTTTAATAGTTCCATTGTTAGCAAGCATTCATTGAGCAACTCTGAGGCTGACAACAATGACAACAAATTGCCATCTTCAGACATAAAGTCTGTGAAAGCAAACGATGCTTTAGACTCGTCGTCGTTGTCTTTGATTGATATTAAAGAAGTTGCTTACAGCAAAGAAAATTGTAACAATAGTctaaataataatgatgatggtAATGATGATGAAAATGATGATGAGTGTGCCGAACCATATGATGAACTCTTAGTGCAATTCCTCGATGAATCCAATCAGATTGCTGAGGCTAGATTAGCTGCTAGACGGCACGCTCGAGCGGAAGCTCGCGAAATACGTATGCGAGAATTAGAACGCCAGCAAAAAGAACAAGAATCTAATGCAGATCGTGTTTTCGATATGCATTCAACCGTAACTGGAATTACGCCTTTGTCACACATGCGTCTGGGCTTGGGGAGTTCACCCGTTACAGGTTTACTAAACTCGACAAGAGCCAACTCCATGTCATCGAGACGCAGCAGTGAAGATTCTTTAGAAGAGGAAGGCCGCAGTTTAAGGGATATACGTCATGAGTTaaaggATGTTGAAGAACGGTTTCGCAAGGCTATGATAGCAAATGCTCAGCTGGATAACGATCGTGCCTCACAAACGTATCAAATACAGTTGCTGAAAGACAAACTGGAAGATATGGAAGAATCATATTCACAATTACAGCGTGAATGCAAGGAAAAGACACGCGATTGCAATGCCTTGAAACGATCATTGGATAAATTAAGCGAAGAGCTTAAATTGGTACAGGGTCAGCTAAATGAGCGTGACACACTGATAGCAGAACAAGGTTTAGTTATTGTTGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCACTGTTGAAAATGCACAATTATTGGGCTCGGTGCAAGGGTCGTTAGatGTGCGGCTTAAGAAATTCAGCGAAGAGAAACAACAACTGCAGTCCGAAGTTCAGCATTTGCAGGAACAATTAGAATCATATAAAAGTCAGGGCAAAGGTCGAGGTAAAGGCAATTCTTCTAATGGTCCTTTAGGCTCcgatgatgatgattatgaAGCTCAAAGAGAAGCCAATAAAATCATAATGGACTATAAATATAAGTTACAAAAAGCTGAACAGGAAATTGCTAGTCTTCAATCAAGCTTAGCACGTTCTGAAACGCAGGTTATACGTTACAAAAGTACTGCTGAAGCTGCCGAGAAAGCTGAGGCCGAACTTAAAATCGAAAGAAGGAAACTGCAAAGAGAGAATCGCGAAGCAATGGAAAAGCTTGAAGAGCTAGAAACATCAAATAATCATCTTTTGAAACGTTTGGATAAATTAAAGAATGCCAAAAGTGCTTTACTAAAAGATCTCTGA
- Protein Sequence
- MSVEQKLTDKNVVSTTTATTTANSGSTKSNKKNQNNNNNNNNSKSSKKFIKKALKISKTKKHANITNANNKNNNNNNKSNTTNRSSGSSNCGNNNNVEVANDEIIEELFDFSDNDLKELDHIKNEDEISKNNSNSIASGELLTEGSHKLKENEEVDKNNSELQLQNMTTNNNTNNQNNDEAERKEEQQVELVLLSSPNDNIDKQSEDIPKDNELVTTTISSITNNIISVEGNVDKCEIDKSQQEVESFESEKSTQKKEETNNDDSSSAIVQIFNSSIVSKHSLSNSEADNNDNKLPSSDIKSVKANDALDSSSLSLIDIKEVAYSKENCNNSLNNNDDGNDDENDDECAEPYDELLVQFLDESNQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGSSPVTGLLNSTRANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVTVENAQLLGSVQGSLDVRLKKFSEEKQQLQSEVQHLQEQLESYKSQGKGRGKGNSSNGPLGSDDDDYEAQREANKIIMDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01399449;
- 90% Identity
- iTF_01399449;
- 80% Identity
- -