Tfer026874.1
Basic Information
- Insect
- Tachina fera
- Gene Symbol
- stc
- Assembly
- GCA_905220375.1
- Location
- LR999965.1:117319462-117328237[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3 4.7e+04 -4.4 1.6 15 19 658 662 657 662 0.81 2 13 0.11 1.7e+03 0.5 0.2 4 10 691 697 690 699 0.95 3 13 3.2e-05 0.5 11.8 16.7 1 19 703 720 703 720 0.93 4 13 1.6e-06 0.026 15.9 13.7 3 19 758 774 756 774 0.91 5 13 2.4 3.8e+04 -3.8 0.6 7 11 778 782 778 782 0.87 6 13 0.00092 15 7.1 20.3 1 19 814 832 814 832 0.98 7 13 2.8e-05 0.44 12.0 14.4 4 18 880 894 873 895 0.86 8 13 0.013 2.1e+02 3.4 9.3 1 11 935 945 935 946 0.96 9 13 3 4.7e+04 -4.8 1.1 4 10 950 956 950 956 0.58 10 13 9.1e-10 1.4e-05 26.3 15.5 1 18 962 979 962 980 0.97 11 13 3 4.7e+04 -8.6 11.4 4 18 1021 1036 1016 1037 0.75 12 13 5.6e-08 0.00088 20.6 12.6 1 17 1073 1089 1073 1095 0.93 13 13 8.5e-07 0.013 16.8 14.0 1 19 1105 1124 1105 1124 0.96
Sequence Information
- Coding Sequence
- ATGTCTACAGATTCAAAATCTCAGTCTTCTTCGCAACCACCACTGTCTCAACTTTGGCCGGGTTTTGGTTCTACAACATCCGATCTCAATAACCCTCTGGAACACCATCAACCAAATAATTCACCATCACCTTTGTACCCCAGTTTGGAAAAGCAGCAACATCAGAATAACAACTATGTGAATTTTCACCAATTTATAATGCAGCATAATTTAGCATCACCGAATCAAACTAATTCGCCTATGTCATCATCTCTTGAAGATACATTTGCCAAACAAGTTGGAGGAAACTCTAATTACGACGATGTTTTCAATATTATGAATATGGGAAGCCTGAATAATAATACCAGCGGTAGAGACAATAATTTAAGCCACAGTAATGTCTTTTCAACGCAACAAACTATATCGCCCATGTCATCATCTATAGGGGATACATTTGGGAAACAAGATGGACAAAACTCCAATTACGATGACGTCTTGAATATACTTAACAACATGGGAAACATGACCAACAATATTAATGCTAAAAGGAATAATTTAAGCAGCACGAATGTCGCTTTAGCTGTCAGTCATAACAGTGACAGCAATAATTCTAATaatcaacagcagcagcagctcaAACATCAACAATACAATTTTTTCAATCCATCTCAAACGCAATATCCATTTGCCAATAATCCAATTTCCAGCAACAATAGTATATTTTCGGATGGTTTATATGGCTATAATATTAATCCTAATGCAGGAGCTGGAACTCCGAATTCAGCTGCCAATAATTCAACACCATCTGCATCGGAAGCTCAAAACTATTACGATGCAGTAaattcatataataactttcATACCAACGGAACTACTTACTATGCAAATCCTTTTGCCACAGGCTTTGATTTTTCCAATACCAAATTACAAATTACTGCCCCCGAATTTGTACCACGATTCGATAGACTTTCGTTGAACGAAACTGCTCAGGAAGAGAAACAACAAACCGAGAATATTGCTTTAAACTTTGAAACTGTGAATGATAAATTAATTAAGCCTCAAGATGAATATGGGAGACTAGATGTTACTATATCAGGAGATCCTAAAGATATAGAGAAAAATGTAGATACCAGCTTTGAAAAGGAAGAAAAACGCGAACAACAGAGACATGAACGTACCAGAGGTAATAATCGCCATCAGAATAAACATGAAACGGAAAATAACAAGAGAACTAATAATCGCTTGGAAAAGAATATGGAAAGATTTTCAAGAAATTTGCAAGATAAGCCGCAAAATAATGATTCAGCTTCTAACTCTAATTCATCAACGCCCTCTTTAACTCAGAACGGTAAGGAGCGAGATTTTCAGAATCAAGGAGTTTCTGCCAAGCCGGCAGGTGCTTTTAACAAAAATCAGCGCGGTTCAATTGGTGGTGGTGGTAATGGCGACAAGCCAAGAACTTCTGACGCACAAGACAAGGGCGGGGATAAAAACAATTACAACAAGCGTTATCAAAATGGCAGACGTCCTCAAGAATTTGCAGAGCGCGAAGATCGCTTTGAGAGGTATGTAGAGCGTGGAGACCGTTCCGAACGTGGTCATAACCAGCGTAATCAACAACGAAACGACTATCATCAACGCTATGATAATTATCGCAGCAACAAACGACGTGATGATTGGAACCGTAATCGCGATCGCATAAATGGTTTCCGAGTTGAAGAAAAGTACTGCAATGATAATGGCAAAGAAAGTCCTTTGCCTTCGCCCGAAAAGCGCTCACCTAAAAAGACCTATgacaaagaaaacgaaaaactttCTCAGAGAGAGAAACTTATAAGAGATATAGAGACTAGACGTTTAGAATGTTTGGTTTGCGTAGAGTCCATCAAGGCTCATCAGGGAGTTTGGTCTTGTCACAGCTGCTATCATATACTCCATTTGCAATGCATAATAAAATGGGCTTCATCTTCAAAGTCGGATAACGGCTGGCGTTGTCCCGCTTGCCAGAATGTTGATAAGAATGTTCCTCGTGACTACTATTGCTTCTGtggcaaattgaaaaatccaacAAATAATCGTCAAGATATTGCCCATTCTTGTGGTGAAGTTTGTGGTCGTGTAGAAGGCTGTTCCCATGCCTGCACTCTACAGTGCCATCCAGGACCGTGCCCTCCCTGTCAGGCTCAAGTTAAGCGCGAATGTGGTTGTGGCAAAACTTCTAGAATTATGCTGTGTTATGTCAAAGAGACTATAGAGTGTGATTCAACTTGTGAAAAACTATTGAACTGTGAATTACACATTTGCCAGGAAAAATGTCATGAAGGAAAATGTCCTCCTTGCAAGGAGAAAGTAGAGCAGAAATGTCACTGTTCCAAGCAGGACAGGCAAGTAACCTGCACACGCGAATCCCAAGACAAACATAATTATTCTTGTGGCAAACCATGCGGAAAGGATTTAAGCTGTGGCAATCACAAATGTAAAGATTGTTGCCACCCCAATGGATGTAGACCTTGTAAGTTAAGTCCTGACTATGTGACTTCTTGTCCTTGTGGCAAAATGCCCATTGTAAGTGAACAGCGCAAATCTTGCTTAGATCCCATACCTGTATGTGAAGGAGTTTGCAGCAAGACTTTGAAATGTGGCAAAGCCACCAATCCTCATCACTGTACATCTAAATGTCATTTGGGAAATTGTCCCCCTTGCAACAAGCAAACAGCTGTCAAGTGTCGCTGTGGTCATATGGATCAAATGATAAAATGTCGTCAATTGTCGACAAGAGCCGATGACGCTAGATGCAAGAAACGTTGCACTAAGAAGCGTTCATGCGGCAAACATAAATGTAACCAAGAATGCTGCATAGACATCGATCACTTTTGTCCACTGCCTTGTAATTATACGCTGTCTTGTGGCAAACACAAGTGTGATCAACCCTGTCATCGGGGCAATTGTCCGCCCTGTTATCGTTCCTCTTTCGAAGAACTCTTTTGTGAGTGTGGTGCTGAAGTTATCTACCCTCCTGTGCCCTGTGGCACCAAGCGTCCCGTTTGCAAACTCCCCTGTTCGCGTAAACATCCATGCGACCATACTCCACAACATAACTGCCACTCGGCTGCCACTTGTCCTCCCTGTATGATGTTCACCACAAAGTGGTGTTTTGGCCAGCATGAACAACGTAAAACCATTCCGTGCTCTCAACAGAGTTTCTCGTGTGGCTTGGCTTGCAATAAGCCATTGCCGTGTGGACGTCACAACTGCATTAAAACTTGTCACGAGGGACCTTGCCAAACGCCAGGAGAAATATGCAAACAAAACTGCACTACACCGCGCAGTACTTGTGGCCACAAGTGTATGGCACCATGCCACAATGGAGATTGCCCAGAGACTCCCTGCAAGGAAATGGTGGAAGTGCAATGCGAATGCGGCAATCGCAAGCAAATGCGCACTTGTGCTGAATTGGTTAGAGAATTCAGTCGCATAGCTACGGCTCAGTTGGCCTCTTCTATGGCTGAAATGCAGCGTGGCAACTATATGGAGCTGTCGGAAATTTTAGCTCCTGTCAAGCTATCAGGAAAATCTAATAAAACTTTAGATTGCAACGAAGAATGCCGTTTGCTCGCACGTAACCGTCGCTTGGCTATTGGTCTACAAATACGCAATCCCGATTTGCCATCGAAACTTCAAACGAAATATTCTGATTTGATACGTAACTATGCAAAACGCGATCCAGCCCTGGTCAAGTCCATACACGATGCTTTAACTACTCTGGTAAAATTGGCCaaagaaagtaaacaaaaatctcGCTCATACTCGTTTCCCACTATGAATCGTGAAAAGAGGCAAGTGGTACATGAGATGTGTGAAATGTTTGGTGTAGAATCGGTTGCCTATGATGCGGAACCCAATCGTAATGTGGTGGCCACTGCTTACAAGGATAGAtcttGGCTACCTGCTTCCAGTATTATGGAAGTAATAGCTCGTGAGGCTGGCCAAAGACGAGTACCAGTGCCAAGTAATAATGCTTGGGGCTTAAAAAGATAA
- Protein Sequence
- MSTDSKSQSSSQPPLSQLWPGFGSTTSDLNNPLEHHQPNNSPSPLYPSLEKQQHQNNNYVNFHQFIMQHNLASPNQTNSPMSSSLEDTFAKQVGGNSNYDDVFNIMNMGSLNNNTSGRDNNLSHSNVFSTQQTISPMSSSIGDTFGKQDGQNSNYDDVLNILNNMGNMTNNINAKRNNLSSTNVALAVSHNSDSNNSNNQQQQQLKHQQYNFFNPSQTQYPFANNPISSNNSIFSDGLYGYNINPNAGAGTPNSAANNSTPSASEAQNYYDAVNSYNNFHTNGTTYYANPFATGFDFSNTKLQITAPEFVPRFDRLSLNETAQEEKQQTENIALNFETVNDKLIKPQDEYGRLDVTISGDPKDIEKNVDTSFEKEEKREQQRHERTRGNNRHQNKHETENNKRTNNRLEKNMERFSRNLQDKPQNNDSASNSNSSTPSLTQNGKERDFQNQGVSAKPAGAFNKNQRGSIGGGGNGDKPRTSDAQDKGGDKNNYNKRYQNGRRPQEFAEREDRFERYVERGDRSERGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYCNDNGKESPLPSPEKRSPKKTYDKENEKLSQREKLIRDIETRRLECLVCVESIKAHQGVWSCHSCYHILHLQCIIKWASSSKSDNGWRCPACQNVDKNVPRDYYCFCGKLKNPTNNRQDIAHSCGEVCGRVEGCSHACTLQCHPGPCPPCQAQVKRECGCGKTSRIMLCYVKETIECDSTCEKLLNCELHICQEKCHEGKCPPCKEKVEQKCHCSKQDRQVTCTRESQDKHNYSCGKPCGKDLSCGNHKCKDCCHPNGCRPCKLSPDYVTSCPCGKMPIVSEQRKSCLDPIPVCEGVCSKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKLPCSRKHPCDHTPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHNCIKTCHEGPCQTPGEICKQNCTTPRSTCGHKCMAPCHNGDCPETPCKEMVEVQCECGNRKQMRTCAELVREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSGKSNKTLDCNEECRLLARNRRLAIGLQIRNPDLPSKLQTKYSDLIRNYAKRDPALVKSIHDALTTLVKLAKESKQKSRSYSFPTMNREKRQVVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPASSIMEVIAREAGQRRVPVPSNNAWGLKR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01400039; iTF_01399152; iTF_01174756; iTF_00760677; iTF_00760678; iTF_01261574; iTF_00901162; iTF_01075060; iTF_01177493; iTF_00742455; iTF_01138648; iTF_00900222;
- 90% Identity
- iTF_01399152;
- 80% Identity
- -