Basic Information

Insect: Germaria angustata
Gene Symbol: stc
Assembly: GCA_963681545.1
Location: OY812999.1:101170252-101176665[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3 4.5e+04 -4.4 1.6 15 19 593 597 592 597 0.81

2 13 0.1 1.5e+03 0.6 0.2 4 10 626 632 625 634 0.95

3 13 3e-05 0.45 11.9 16.7 1 19 638 655 638 655 0.93

4 13 8.8e-08 0.0013 20.0 15.0 3 19 693 709 691 709 0.92

5 13 5.6e-05 0.84 11.0 19.6 1 19 749 767 749 767 0.98

6 13 2.7e-05 0.4 12.0 14.4 4 18 815 829 808 830 0.86

7 13 0.012 1.9e+02 3.5 9.3 1 11 870 880 870 881 0.96

8 13 3 4.5e+04 -4.7 1.1 4 10 885 891 885 891 0.58

9 13 8.6e-10 1.3e-05 26.4 15.5 1 18 897 914 897 915 0.97

10 13 3 4.5e+04 -4.1 0.9 6 10 944 948 944 949 0.81

11 13 3 4.5e+04 -7.7 9.7 10 18 962 971 951 972 0.76

12 13 8e-09 0.00012 23.3 9.2 1 16 1008 1023 1008 1030 0.92

13 13 5.8e-07 0.0086 17.4 13.5 1 19 1040 1059 1040 1059 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3	4.5e+04	-4.4	1.6	15	19	593	597	592	597	0.81
2	13	0.1	1.5e+03	0.6	0.2	4	10	626	632	625	634	0.95
3	13	3e-05	0.45	11.9	16.7	1	19	638	655	638	655	0.93
4	13	8.8e-08	0.0013	20.0	15.0	3	19	693	709	691	709	0.92
5	13	5.6e-05	0.84	11.0	19.6	1	19	749	767	749	767	0.98
6	13	2.7e-05	0.4	12.0	14.4	4	18	815	829	808	830	0.86
7	13	0.012	1.9e+02	3.5	9.3	1	11	870	880	870	881	0.96
8	13	3	4.5e+04	-4.7	1.1	4	10	885	891	885	891	0.58
9	13	8.6e-10	1.3e-05	26.4	15.5	1	18	897	914	897	915	0.97
10	13	3	4.5e+04	-4.1	0.9	6	10	944	948	944	949	0.81
11	13	3	4.5e+04	-7.7	9.7	10	18	962	971	951	972	0.76
12	13	8e-09	0.00012	23.3	9.2	1	16	1008	1023	1008	1030	0.92
13	13	5.8e-07	0.0086	17.4	13.5	1	19	1040	1059	1040	1059	0.97

Sequence Information

Coding Sequence: ATGTCTGCAGACTCAAGACATCAGGCTTCATCACAACCACCACTGTCTCAACTTTGGCCAGGTTTTGGTTCTATAACTTCCGATCATAATAATCCTCTGGAACATCAGCAATCAAATCCGACTTCAATTTGGCACTCAAGCTTggcaaagcaacaacaacaagaacagcCGGATAACAACAATTATgtgaattttaatcaatttataatgCAACATAATCTTGCATCATCGCAACAAAATAATTCACCCCTGTCTTCGTCCATAGAGGATTCATTTGCCAAAAGAGATGAACAGAATTTTAATTATGATGTTTTTAGTATCATACAAAACAGCCGCAAAGGAGGTTCAGCTCTCATTAACAACAGTgacaacattaattttaattatcatcatcatcatcatcatcaactgCACCAGCAACCCAAACGGCAACAGCAGTATAATTTTTTCAATCCATCTCTACCACAATATCCATTTGCAAGTAATCAAATTTCGAGCAACAATAGTGTATTTTCGGACGGCTTACATAACTACAATATTAATCCCACTGAAAGAGCTGGAAGTCCAAATTCAGTAATCAATCCCTCATCAACTTCATCGGGAAGTCAAAATTATTACGATGTTTCAAATTCATATAGCAATTTTTCTACCAATGGTACCACTTACTATGCCAATCCTTTTGCCACAGGATTCGATTTTTCCAATACTAAATTGCAAATCAGTGCTCCCGAATTTGTGCCCAGATTTGATAAACTTTCGTTGAACGAAACTGCTCCAGACACAAAACAAGAAAAGGAAAGTGTTGCTTTAAACTTTGAAACTACAAATGATAAATTTGTCCAGCCGCCGCATGTTGAGTATGGGGGAAGAGATACCATCACTTCAAGTGATCCTAAGGATATAGAAAAAAGTACAGATACTagttttgaaaaagaagaaaaaaggcaACAGCAGAGGAATGAGCGTACCCGTGGAAATAATCGTCATCAAAATAAGCATGACAAAGAAAATAACAAGAGAAATAATAATCGTTTGGAAAAGAATATGGAAagattttcaagaaatttgCAAGAGAAGCACCAAAATAATGATTCAGCTTCAAATTCCAATTCTTCTACACCTTCTTTAATTATGAACGGTAAAGAGCGAGATAGTCAGAATCAGGGTATATCGAAGTCTACTGGGGCTGTCAGTAAAAGTCAGCGTGGTTCTATAAACGGTGGTAATGgtgacaaacaaaaaacttccGACAGTCAAGAAAAAGACgaagataaaaataatcaaCATAAGCGTTATCAAAACGGTAGACGTCCGCAAGATTTGTCGGAGCGAGAAGATCGCTTCGATCGTTATGTAGAACGTGGAGAGCGTTCTGAACGTGGACATAGTCAGCGTAATCAACAACGTAATGACTATCATCAACGTTATGACAATTATCGCAGCAATAAAAGACGCGATGATTGGAATCGTAATCGTGATCGCATAAATGGATTTCGTGTCGAAGAGAAATTCTCCAATGACAATGGCAAAGAAAGCCCATTGCCATCCCCCGATAAGCGATCACCAAAAAAGTCTTATgataaagaaaacgaaaaactcTCGCAGAGGGAGAAACTTATAAGAGATATAGAGACTAGACGTCTAGAATGTTTGGTGTGCGTTGAGCCCATTAAGGCTCATCAGGGAGTTTGGTCTTGTCATAGTTGCTACCATATACTTCACTTGCAGTGCATAATAAAATGGGCTTCTTCTTCAATATCGGAATATGGCTGGCGTTGTCCAGCATGTCAGAATGTGGAAAAGGATGTTCCTCGCGACTACTATTGTTTCTGTGGCAATTTGAAAAACCCACCAAATAATCGCCAGGATATTGCTCATTCTTGTGGTGAAGTATGTGGTCGCGTAGACGGATGCTCCCATGCTTGTACTCTTCAGTGTCATCCCGGACCATGTCCTCCTTGTCAGGCTCAAGTTAAGCGAGAATGCGGTTGTGGCAAGACTTCAAAAATCATGCAATGTTACATTAAAGAGACCATAGAATGTGATTCAATTTGTGAAAAACTATTGAACTGTGAATTACACACTTGCCAAGAGAAATGCCACGAGGGAAAATGTCCACCTTGCAAGGAGAAAGTGGATCAGAAATGTCACTGCTCTAAACAGGAAAGACAAGTAACTTGCACACGTGAATCCCATGACAAACATAACTATTCATGTGGAAAACCTTGTGGTAAGGATTTAAGCTGCGGCAATCATAAATGTAAGGACTGTTGCCATCCCAATGAGTGTAAACCCTGTAAACTAAGACCCGATTACGTGACTTCTTGTCCTTGTGGCAAAATGCCTATTGTAAGCGAACAGCGCAAAACTTGCTTGGATCCCATACCTGTATGTGAAGGAGTTTGTGGCAAAACTTTGAAATGTGGAAAAGCTACCAACCCTCACCACTGCACATCCAAATGTCATTTGGGAAATTGTCCACCTTGTAACAAGCAGACAGCGGTTAAGTGTCGCTGTGGTCACATGGACCAAATGATAAAATGTCGTCAGCTGTCCACACGAGCAGATGACGCCAGGTGTAAGAAACGCTGTACGAAAAAGCGCTCATGCGGCAAACACAAGTGTAACCAGGAATGCTGTATAGACATCGATCACTTTTGCCCACTGCCTTGTAATTATACGCTCTCTTGTGGCAAACACAAGTGTGATCAACCCTGTCACCGGGGCAATTGTCCACCATGTTACCGTTCCTCTTTCGAAGAGCTCTTCTGTGAGTGCGGTGCTGAAGTTATCTATCCCCCAGTTCCTTGTGGCACTAAACGTCCTGTTTGCAAACGGCCCTGTTCGCGTAAACATCCTTGCGATCACCCTCCACAGCATAACTGCCATTCGGCTGCCACTTGTCCTCCATGTATGATGTTTACCACGAAATGGTGTTTTGGCCAGCATGAACAACGCAAAACTATTCCCTGTTCGCAGCAGAGTTTTTCTTGCGGTTTGGCTTGCAATAAGCCCTTACCGTGTGGACGGCACAACTGCATTAAAACATGCCATGAGGGACCATGCCAAATGGTTGcagaaatatgtaaacaaaattgcaCTACAGCACGCGCTGTTTGCGGCCACAAATGTATGGCACCATGTCACAACGGAGATTGTCCGGACACTCCCTGTAAAGAAATGGTTGAGGTGCAATGCGAATGCGGTAATCGCAAACAAATGCGCACTTGCGCTGAATTGGCTAGAGAATTCAGTCGTATAGCCACGGCTCAATTGGCATCTTCCATGGCTGAAATGCAGCGTGGAAACTACATGGAACTATCTGAAATTTTAGCTCCCGTcaaactatctggaaagtcaAATAAAACTTTAGATTGCAACGAAGAATGCCGTATACTCGCACGCAACCGTCGCTTGGCAATTGGTCTACAAATACGCAATCCTGATTTGCCAtcaaaacttcaaacaaaatattctgATTTTATCCGCGGCTTTGCCAAGCGTGATCCAGCTTTGGTCAAATCCATACATGACGCTCTAACTACTCTGGTGAAATTGGCCAaagaaagtaaacaaaaatcacGCTCACATTCGTTTCCCACTATGAATCGTGAAAAGAGGCGCCTGGTGCATGAAATGTGTGAAATGTTTGGTGTAGAATCTGTAGCCTATGATGCAGAACCTAATCGTAATGTGGTAGCCACTGCTTACAGGGATGTATCTTGGCTTCCCGCTTCCAGTGTTATGGAAGTAGTAGCGCGTGAGGCTGGCCAAAGACGTGTACCAGTGCCAAGTAATAATGCCTGGGGATTAAAGAGAtaa
Protein Sequence: MSADSRHQASSQPPLSQLWPGFGSITSDHNNPLEHQQSNPTSIWHSSLAKQQQQEQPDNNNYVNFNQFIMQHNLASSQQNNSPLSSSIEDSFAKRDEQNFNYDVFSIIQNSRKGGSALINNSDNINFNYHHHHHHQLHQQPKRQQQYNFFNPSLPQYPFASNQISSNNSVFSDGLHNYNINPTERAGSPNSVINPSSTSSGSQNYYDVSNSYSNFSTNGTTYYANPFATGFDFSNTKLQISAPEFVPRFDKLSLNETAPDTKQEKESVALNFETTNDKFVQPPHVEYGGRDTITSSDPKDIEKSTDTSFEKEEKRQQQRNERTRGNNRHQNKHDKENNKRNNNRLEKNMERFSRNLQEKHQNNDSASNSNSSTPSLIMNGKERDSQNQGISKSTGAVSKSQRGSINGGNGDKQKTSDSQEKDEDKNNQHKRYQNGRRPQDLSEREDRFDRYVERGERSERGHSQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKFSNDNGKESPLPSPDKRSPKKSYDKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQGVWSCHSCYHILHLQCIIKWASSSISEYGWRCPACQNVEKDVPRDYYCFCGNLKNPPNNRQDIAHSCGEVCGRVDGCSHACTLQCHPGPCPPCQAQVKRECGCGKTSKIMQCYIKETIECDSICEKLLNCELHTCQEKCHEGKCPPCKEKVDQKCHCSKQERQVTCTRESHDKHNYSCGKPCGKDLSCGNHKCKDCCHPNECKPCKLRPDYVTSCPCGKMPIVSEQRKTCLDPIPVCEGVCGKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHNCIKTCHEGPCQMVAEICKQNCTTARAVCGHKCMAPCHNGDCPDTPCKEMVEVQCECGNRKQMRTCAELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSGKSNKTLDCNEECRILARNRRLAIGLQIRNPDLPSKLQTKYSDFIRGFAKRDPALVKSIHDALTTLVKLAKESKQKSRSHSFPTMNREKRRLVHEMCEMFGVESVAYDAEPNRNVVATAYRDVSWLPASSVMEVVAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398115;
90% Identity: -
80% Identity: -