Basic Information

Insect: Linnaemya tessellans
Gene Symbol: stc
Assembly: GCA_951800035.1
Location: OX637533.1:17233178-17239267[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2 6.4e+04 -4.4 1.6 15 19 601 605 600 605 0.81

2 11 0.00032 10 8.0 20.6 1 18 646 662 636 663 0.88

3 11 4.4e-06 0.14 14.0 12.8 3 19 701 717 699 717 0.91

4 11 3.7e-05 1.2 11.0 19.6 1 19 757 775 757 775 0.98

5 11 3.6e-05 1.2 11.0 15.8 4 19 823 838 816 838 0.87

6 11 0.0083 2.7e+02 3.5 9.3 1 11 878 888 878 889 0.96

7 11 2 6.4e+04 -4.7 1.1 4 10 893 899 893 899 0.58

8 11 5.8e-10 1.9e-05 26.4 15.5 1 18 905 922 905 923 0.97

9 11 2 6.4e+04 -8.5 10.5 10 18 970 979 959 980 0.76

10 11 1.6e-08 0.00053 21.7 10.8 1 16 1016 1031 1016 1038 0.92

11 11 2.6e-07 0.0082 17.9 14.2 1 19 1048 1067 1048 1067 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2	6.4e+04	-4.4	1.6	15	19	601	605	600	605	0.81
2	11	0.00032	10	8.0	20.6	1	18	646	662	636	663	0.88
3	11	4.4e-06	0.14	14.0	12.8	3	19	701	717	699	717	0.91
4	11	3.7e-05	1.2	11.0	19.6	1	19	757	775	757	775	0.98
5	11	3.6e-05	1.2	11.0	15.8	4	19	823	838	816	838	0.87
6	11	0.0083	2.7e+02	3.5	9.3	1	11	878	888	878	889	0.96
7	11	2	6.4e+04	-4.7	1.1	4	10	893	899	893	899	0.58
8	11	5.8e-10	1.9e-05	26.4	15.5	1	18	905	922	905	923	0.97
9	11	2	6.4e+04	-8.5	10.5	10	18	970	979	959	980	0.76
10	11	1.6e-08	0.00053	21.7	10.8	1	16	1016	1031	1016	1038	0.92
11	11	2.6e-07	0.0082	17.9	14.2	1	19	1048	1067	1048	1067	0.96

Sequence Information

Coding Sequence: ATGTCTACAGATTCAAAATCCCCATCTTCTTCACAACCTTCACTTTCACAACTTTGGCCGGGTTTTGGTTCGTCAACATCAGATCTCAATAACCCTTTGGAACATCAGCAATCCGATCAGTCATCATCACTTTTGTATCCAGGCTTCGGAAAACAACAGCAGACGAATAATAATAACTATGTAAATTTCAATCAGTTTATAATGCAACATAATTTTGCATCAACGCATCAAGCTAAATCACCGCCCATATCTTCATCTCTAGCAGATACATATTCTAATCAAGATGGACGTAATTCCAATTATGATGatgtatttaatattattcacaACATAGGAGATATGAGCAACAATATTAGTGCAAAAGACAATAACAACATCAGCAGCAATGTCGGTGCTATTGCCAGTAATAACAGTGACACCATTAATTCCAATCATCAACAGCTCAAATATCAACATTTTAATTTTTTTAATCCATCGCTGCCTCAATATCCATTTGCCAATAACCAAAtttccaacaacaacagcatatTTTCGGATGgtttacaaaattacaatatCAATCCCAATACAGGAGGAGCTGGAACTCCAACATCGGCTATCAATCCAATATCATCTTTATCGGGAAGTCAAAACTTTTATGATACAAATTCATACAGTAATTTTCATGCTAACGGCACCACATACTATGCTAATCCTTTTGCTACAGGTTTTGATTTTTCCAATACCAAATTGCAAATTAATGCTCCTGAATTTGTGCCCAGATTTGACAAACTTTCGTTGAACGAAGCTGCTGAAGaattacaacagcaacaacaacagccggAGATTATTCCTTCTAGCTTTGAAGctataaatgatatattttcacaGCCAAAGGAACAATATAGAGCACAAGATGCAGCCactttaagtgattttaaaccCACAGAAGAAAATGTTGACAGCAGTTTTGAAAAGGAAGAAAAACGCCAGCAGCAAAGGCTTGAACGTACTCGCGGCAATAATCGTTATCAAAATAAACATGACAAGgaaaatagtaagaaaaataatagTCGTTTGGAAAAGAATATGGAGAGATTTTCAAGAAATTTACAAGAAAAGCCACAAAATAATGATTCAGCATCAAATTCCAATTCTTCAACATCTTCCATAACGCCGAACGGCAAGGAACGAGATCAGCAGAATCAAGGAACTTCTAAGTCTACTGGCGCTTATAGCAAAGGCCAGCGAGGCTCCATAAATGGCGTTAATGGTGACAAACAAAGAAATACCGATAGTCAAGACAAGATTGGGGATAAAAACAATTATCAAAAACGTTATCAAAATGGCAGACGTTCTCAAGATTTTTGCGAACGTGAGGATCGCTTTGACCGTTATGTAGAGCGTGGTGAACGTTCCGAACGTGGTCACAACCAACGAAATCAACAACGTAACGATTATCATCAACGTTACGATAATTATCGCAGCAACAAAAGGCGTGACGATTGGAATCGTAATCGTGATCGCATAAATGGTTTTCGTGTTGAAGAGAAGTACTCCAATGACAATGGAAAAGAAAGTCCTTTGCTTTCGCCCGAAAAGCGATCACCACGAAAGTCTTATGATAAAGAAAACGAAAAGCTTTCTCAAAGAGAGAAACTTATAAGAGATATAGAGACCAAACGTCTAGAATGTTTGGTATGTGTTGAGCAAATTAAGGTTTATCAGGGTGTTTGGTCTTGCCATAGTTGCTACCACATACTACATTTGGAGTGCATCATAAAATGGGCTTCTTCCTCAAAAGCAGATAATGGTTGGCGCTGTCCGGCTTGTCAGAATGTTGAGAAAGATGTTCCTCGTGACTACTATTGTTTCTGTGGCAAACAGAAAAATCCACTAAATAATCGTCACGATATTGCTCATTCGTGTGGCGGAGTGTGTGGTCGCGTGGAAGGCTGCTCTCATGCCTGTACTCTACAGTGTCATCCAGGGCCATGTCCGCCCTGTCACGCTAACGTTAAGCGTGAATGCGGTTGTGGCAAGACTTCAAAACTGTTGCAATGTTGTGTTAAGGAAACCATTGAGTGCGATTCGACTTGTGAAAAACTATTAAACTGCGAATTGCATTTTTGCCAGAAGAATTGCCACAAAGGAAAATGTCCTCCTTGCAAGGAAAAAGTAGATCAAAAGTGCCACTGTTCTAAACAGGAAAGGCAAGTGACTTGCACTCGCGAATCCCATGACAAACACAACTATTCATGTGGCAAAATCTGTGGCAAGGATTTAAGCTGTGGCAATCATAAATGCAAAGACTGCTGCCACCCCAACGAATGTAAACCTTGTAAATTGAGTCCCGATTATGTCACTTCCTGTCCGTGTGGTAAGATGCCTATTCTAAACGAACAGCGTAAAACTTGCTTGGATTCCATACCTGTTTGCGAAGGTGTGTGTGGCAAAACTTTGAAGTGTGGCAAACCCACTAACCCTCATCACTGTACATCTAAATGTCATTTGGGAAATTGTCCCCCTTGCAGCAAACAGACAGCTGTCAAGTGCCGCTGTGGTCATATGGATCAAATGATAAAATGTCGTCAATTGTCGACACGAGCCGATGACGCTAGATGCAAGAAACGTTGTACCAAAAAACGGTCATGCGGCAAACACAAGTGTAATCAGGAATGCTGCATAGACATCGATCACTTTTGCCCACTGCCCTGTAATTATACACTCTCTTGTGGCAAACACAAGTGTGATCAACCCTGTCATCGGGGCAATTGTCCGCCCTGTTATCGTTCATCTTTCGAAGAGCTCTTTTGTGAGTGTGGAGCCGAAGTTATCTATCCTCCGGTTCCCTGTGGCACCAAACGTCCCGTATGTAAACTCCCCTGTTCACGTAAACATCCTTGTGATCATCCACCTCAACATAACTGCCATTCGGCTGCCACTTGTCCTCCCTGTATGATGTTCACCACAAAATGGTGCTTCGGCCAGCATGAGCAACGTAAGACTATACCGTGTTCCCAGCAGAGCTTCTCTTGCGGTTTGGCGTGCAACAAGCCATTGCCCTGTGGCCGCCACAACTGCATTAAAACTTGTCATGAAGGGCCGTGCCAAATGGCTGgagaaatatgtaaacaaaactGTACTACAGCACGTGCTACTTGCGGACACAAGTGTATGGCACCATGTCACAGTGGAGACTGTCCAGAGACTCCCTGCAAAGAAATGGTTGAGGTGCAGTGCGAATGCGCCAATCGCAAACAAATGCGCACCTGTGCTGAATTAGCTAGAGAATTTAGTCGCATAGCTACGGCCCAACTGGCCTCCTCCATGGCTGAAATGCAGCGTGGCAACTATATGGAACTATCTGAAATTTTAGCTCCCGTTAAACTATCGGGCAAATCTAATAAAACTTTAGATTGCAACGAAGAATGCCGTACAATCGCCCGTAATCGCCGCTTGGCTATTGGCCTACAAATACGTAATCCTGATTTGCCATCGAAactgcaaacaaaatattctgaTTTTATACGCAACTTTGCTAAACGTGATCCAGCTTTGGTCAAATCTATACACGAAGCTTTAACTACTCTGGTGAAGTTGGCCAaagaaagtaaacaaaaatcACGCTCGCATTCGTTTCCCACTATGAACCGCGAAAAGAGGCAGTTGGTGCACGAAATGTGTGAAATGTTTGGAGTCGAATCGGTTGCCTATGACGCAGAACCCAATCGTAATGTTGTAGCCACCGCTTATAAGGACAGATCTTGGCTACCTGCTTCTAGTATTATGGAAGTAATAGCACGTGAGGCTGGCCAAAGGCGTGTGCCAGTGCCAAGTAATAATGCCTGGGGATTGAAGAGATAA
Protein Sequence: MSTDSKSPSSSQPSLSQLWPGFGSSTSDLNNPLEHQQSDQSSSLLYPGFGKQQQTNNNNYVNFNQFIMQHNFASTHQAKSPPISSSLADTYSNQDGRNSNYDDVFNIIHNIGDMSNNISAKDNNNISSNVGAIASNNSDTINSNHQQLKYQHFNFFNPSLPQYPFANNQISNNNSIFSDGLQNYNINPNTGGAGTPTSAINPISSLSGSQNFYDTNSYSNFHANGTTYYANPFATGFDFSNTKLQINAPEFVPRFDKLSLNEAAEELQQQQQQPEIIPSSFEAINDIFSQPKEQYRAQDAATLSDFKPTEENVDSSFEKEEKRQQQRLERTRGNNRYQNKHDKENSKKNNSRLEKNMERFSRNLQEKPQNNDSASNSNSSTSSITPNGKERDQQNQGTSKSTGAYSKGQRGSINGVNGDKQRNTDSQDKIGDKNNYQKRYQNGRRSQDFCEREDRFDRYVERGERSERGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYSNDNGKESPLLSPEKRSPRKSYDKENEKLSQREKLIRDIETKRLECLVCVEQIKVYQGVWSCHSCYHILHLECIIKWASSSKADNGWRCPACQNVEKDVPRDYYCFCGKQKNPLNNRHDIAHSCGGVCGRVEGCSHACTLQCHPGPCPPCHANVKRECGCGKTSKLLQCCVKETIECDSTCEKLLNCELHFCQKNCHKGKCPPCKEKVDQKCHCSKQERQVTCTRESHDKHNYSCGKICGKDLSCGNHKCKDCCHPNECKPCKLSPDYVTSCPCGKMPILNEQRKTCLDSIPVCEGVCGKTLKCGKPTNPHHCTSKCHLGNCPPCSKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKLPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHNCIKTCHEGPCQMAGEICKQNCTTARATCGHKCMAPCHSGDCPETPCKEMVEVQCECANRKQMRTCAELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSGKSNKTLDCNEECRTIARNRRLAIGLQIRNPDLPSKLQTKYSDFIRNFAKRDPALVKSIHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPASSIMEVIAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398115;
90% Identity: iTF_00901162;
80% Identity: -