Basic Information

Gene Symbol
stc
Assembly
GCA_963932375.1
Location
OZ010653.1:98107037-98115535[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 2 3.1e+04 -4.4 1.6 15 19 597 601 596 601 0.81
2 14 0.093 1.5e+03 0.2 0.2 4 10 630 636 629 638 0.94
3 14 8.7e-07 0.014 16.2 15.4 1 19 642 659 641 659 0.94
4 14 1.9e-07 0.003 18.3 11.9 1 19 695 713 695 713 0.92
5 14 1.5 2.4e+04 -3.7 0.6 7 11 717 721 717 721 0.87
6 14 7.1e-06 0.11 13.3 17.4 1 19 753 771 753 771 0.98
7 14 1.8e-05 0.28 12.0 14.4 4 18 819 833 812 834 0.86
8 14 0.0083 1.3e+02 3.5 9.3 1 11 874 884 874 885 0.96
9 14 2 3.1e+04 -4.7 1.1 4 10 889 895 889 895 0.58
10 14 5.8e-10 9e-06 26.4 15.5 1 18 901 918 901 919 0.97
11 14 2 3.1e+04 -4.1 0.9 6 10 948 952 948 953 0.81
12 14 2 3.1e+04 -7.6 9.7 10 18 966 975 955 976 0.76
13 14 1.7e-08 0.00027 21.7 10.8 1 16 1012 1027 1012 1034 0.92
14 14 5.4e-07 0.0084 16.9 14.0 1 19 1044 1063 1044 1063 0.96

Sequence Information

Coding Sequence
ATGTCTGCAGAATCGAAATCTCAATCTACTACTCAACCACCACTCTCGCAACTGTGGCCGGGTTTTGGTTCTACATCTGATATAGGACATCCTCTGGAGCATCACCAACCAAATCTCGCTCCGTCGTCAACTTTGTCCTCAAGTTTagataaacaacaacaactgccgaataacaacaataattatgtGAATTTTAATCAGTTTATAATGCAACATAATCTTGCAACACCGCATCAAGCTAAATCGCCCGTGTCTTCTTCCCTTCAAGATACATTTGTTAAACAAGATGGTCATAAATCCAATTACGAtgacgtttttaatttttttcataacatgGGAGGCATAAAAAATGATATTATTGATAAAGGAAATAACAACAGCGGTGATAGCAGTATTTCATTTATCAGTAACAACAGCGACAGAATCAATTCCAAtaatcagcaacaacaatataatTATTTTAATTCATGTCTACCGCAAGATCCATTTgtcaattacaataataatcaaatttcaaaCAACAGTGTATTTTCCGATGGATTAAGCAATTACAATATTAATCCCAATACCGGTTTTAGAATACCAAAATCACCTATCAACTTAACATTGCCTTCATCGGAAAGTCAAAATTATTACGATGCCACAAATTTTTATGGTAATTTCCATACCAACGGTACGACTTACTATGCCAATCCCTTTGCCACAGGTTTTGATTTTACCAATACTAAATTGCAAATTAGTGCTCCCGAATTTGTACCCAGGTTTGATAAACTTTCGTTGAACGAAACTGCTCAAGAAGCAAAAGAGCAAACAGGGAGCATTGCTATAAACCATGAAGCCAACGAAAAGTTTTTTACGCCAAACGATGAATATGGCATACGTGATGTAGTCACGTCTGGTGACACTAAAGATATAGGGAAAAAGATGGATACTAGTTTTGAAAAAGACGAAAAGCGCCAAGAGCAGAGAAATGAACGCACCCGAGTTAATAACCGCCATCAAAATAGACAagacaaagaaaataacaaaagaagtAATAATCGTTTAGAAAAGAATATGGAAagattttcaagaaatttacaaGAGAAGCCTCAAAACAATGATTCGGCTTCCAATTCAAATTCCTCCACACCTTCTATAACTATGAACGGTAAGGATCGAGATCAGCAGATTCAAGGAGTTTCTAAGCCTACTGGGGCTTTTAGCAAAAATCAACGCGGTTCTTTAACTGGTCCTAGTGTTGACAACCAAAGAAGTTCTGGCATTCAAGACAAGGGCGGagataaaaacaattacaacaatcGTTATCAAAATGTTAGACGTTCCCAAGATTTGGCAGATCGTGAAGATCGCTTTGATCGTTATGTAGAACGTGGTGAACGTTCTGATCGTGGCCATAACCAGCGTAACCAACAGCGTAATGACTACCATCAACGATATGATAATTATCGCAGTAATAAAAGACGTGACGATTGGAATCGTAACCGTGATCGCATTAATGGTTTTCGTGTAGAAGAGAAATATTCCAATGACAACGGAAAAGAAAGTCCTTTGCCTTCGCCCGAAAAAAGATCTCCCAAAAAGGCTTAcgataaagaaaatgaaaaactttctCAGAGAGAGAAACTCATAAGAGATATAGAGACTAGACGTCTGGAATGTTTAGTTTGTGTTGAGCCCATTAAGGCTCATCAAGGCGTATGGTCTTGTCATAACTGTTATCATATACTGCATTTGCAGTGCATAATAAAATGGGCCTCTTCTTCTAAGTCAGATGATGGCTGGCGCTGCCCTGCTTGTCAGAATGTTGAAAAAGAAGTTCCTCGTGACTACTATTGTTTCTgtgggaaattaaaaaatccaccCAACAATCGTCAGGATATTGCTCATTCTTGTGGTGAATTATGTGGTCGCATAGAGGGCTGTTCTCATGCCTGTACTCTTCTGTGTCATCCAGGACCATGTCCTCCTTGCCAGGCTCAAGTTAAACGAGAGTGTGGTTGTGGCAAGACTTCAAAAATTATGCAGTGTTGTGTAAAAGAGACAGTAGAATGTGATGCTACATGTGAGAAACTTTTAAACTGTGAAATACACACTTGTCAGCTGAAATGTCATGAGGGAAAATGTCCCGTTTGTAAGGAGAAAGTGGAGCAAAAGTGTCATTGTTTAAAACAGGATAGACAAGTTACTTGCACACGTGAATCGCATGACAAACACACCTATTCATGTGGAAAACCTTGTGGCAAAGATTTGAGCTGTGGCAATCATAAGTGCAAAGACTGTTGCCATTCCAATGACTGCAGACCTTGTAAATTGAGTCCTGATTATGTGACTTCTTGTCCCTGTGGGAAAATGCCTATTGTAAGGGAACAGCGTAAATCTTGTTTAGATCCTATACCGGTATGCGAAGGAATTTGTGCTAAAACTTTGAAATGTGGCAAAGCCACCAATCCTCACCACTGCACATCTAAATGTCATTTAGGTAATTGCCCTCCTTGCAACAAACAGACTGCTGTGAAGTGCCGATGTGGACATATGGACCAAATGATTAAATGTCGTCAACTGTCGACCCGAGCCGATGATGCTAGATGTAAGAAACGCTGTACGAAAAAACGTTCTTGTGGCAAACACAAGTGTAATCAAGAATGCTGCATAGATATCGATCATTTTTGTCCATTACCTTGTACTTATACACTCTCTTGTGGCAAACATAAGTGCGATCAACCATGTCATCGGGGTAATTGTCCGCCCTGTTATCGCTCATCCTTCGAAGAACTCTTTTGTGAGTGTGGTGCTGAAGTTATTTATCCACCTGTACCCTGTGGCACTAAACGTCCCGTTTGCAAACGCCCCTGTTCGCGTAAACATCCCTGTGATCATCCTCCACAACATAACTGCCATTCAGCGGCCACTTGTCCTCCCTGTATGATGTTCACCACAAAATGGTGTTTTGGCCAGCATGAACAGCGTAAAACCATTCCGTGCTCTCAGCAGAGTTTTTCGTGCGGCATGGCTTGTAATAAGCCATTGTCGTGTGGACGTCACAACTGCATTAAAACATGTCATGAGGGACCATGCCAAATAGCCGGagaaatatgcaaacaaaactGTACTAAACAACGTTCTACTTGTGGACACAAGTGTATGGCTCCCTGTCACAATGGTGATTGCCCCGAGACCCCTTGTAAGGAAATGgtgGAGGTGCAATGCGAATGCGGTAATCGTAAACAAATGCGCACTTGTGCTGAATTGGCAAGAGAATTTAGTCGTATAGCCACTGCCCAATTGGCCTCTTCTATGGCTGAAATGCAACGTGGCAATTATATGGAACTATCCGAAATTTTAGCTCCTGTTAAATTATCTGCAAATTCTAATAAAACTTTAGATTGCAACGAAGAATGTCGGTTACTCGCACGCAATCGACGCTTGGCTATTGGTCTACAAATAAGAAATCCTGATTTGCCATCGAAACTTTTAACGaaatattctgattttataCGCAAGTATGCCAAACGTGATCCAGCTTTAGTCAAGTCTATACATGAAGCTCTAACTAATTTGGTGAAACTGGCCAAAGAAAGTAAGCAAAAGTCACGCTCGCATTCATTTCCCACAATGAATCGAGAAAAGAGGCAGTTGGTACACGAAATGTGTGAAATGTTTGGTGTAGAATCGGTGGCTTATGATGCAGAACCCAATCGTAATGTGGTAGCCACAGCTTTCAAGGATAGATCTTGGCTTCCGGCTTCTAGTATTATGGAAATAATGGCCCGAGAGGCTGGTCAAAGACGTGTACCGGTGCCAAGTAATAATGCCTGGGGTTTAAAGAGATAA
Protein Sequence
MSAESKSQSTTQPPLSQLWPGFGSTSDIGHPLEHHQPNLAPSSTLSSSLDKQQQLPNNNNNYVNFNQFIMQHNLATPHQAKSPVSSSLQDTFVKQDGHKSNYDDVFNFFHNMGGIKNDIIDKGNNNSGDSSISFISNNSDRINSNNQQQQYNYFNSCLPQDPFVNYNNNQISNNSVFSDGLSNYNINPNTGFRIPKSPINLTLPSSESQNYYDATNFYGNFHTNGTTYYANPFATGFDFTNTKLQISAPEFVPRFDKLSLNETAQEAKEQTGSIAINHEANEKFFTPNDEYGIRDVVTSGDTKDIGKKMDTSFEKDEKRQEQRNERTRVNNRHQNRQDKENNKRSNNRLEKNMERFSRNLQEKPQNNDSASNSNSSTPSITMNGKDRDQQIQGVSKPTGAFSKNQRGSLTGPSVDNQRSSGIQDKGGDKNNYNNRYQNVRRSQDLADREDRFDRYVERGERSDRGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYSNDNGKESPLPSPEKRSPKKAYDKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQGVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKEVPRDYYCFCGKLKNPPNNRQDIAHSCGELCGRIEGCSHACTLLCHPGPCPPCQAQVKRECGCGKTSKIMQCCVKETVECDATCEKLLNCEIHTCQLKCHEGKCPVCKEKVEQKCHCLKQDRQVTCTRESHDKHTYSCGKPCGKDLSCGNHKCKDCCHSNDCRPCKLSPDYVTSCPCGKMPIVREQRKSCLDPIPVCEGICAKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCTYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGMACNKPLSCGRHNCIKTCHEGPCQIAGEICKQNCTKQRSTCGHKCMAPCHNGDCPETPCKEMVEVQCECGNRKQMRTCAELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSANSNKTLDCNEECRLLARNRRLAIGLQIRNPDLPSKLLTKYSDFIRKYAKRDPALVKSIHEALTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAFKDRSWLPASSIMEIMAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01398115;
90% Identity
-
80% Identity
-