Basic Information

Insect: Gymnocheta viridis
Gene Symbol: stc
Assembly: GCA_956483585.1
Location: OY101444.1:27807220-27812108[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3 4.2e+04 -4.3 1.6 15 19 560 564 559 564 0.81

2 13 0.12 1.6e+03 0.4 0.2 4 10 593 599 592 601 0.95

3 13 2.9e-05 0.41 11.9 16.7 1 19 605 622 605 622 0.93

4 13 3.5e-05 0.48 11.7 10.6 3 19 660 676 658 676 0.91

5 13 2.2 3.1e+04 -3.7 0.6 7 11 680 684 680 684 0.87

6 13 4.8e-05 0.67 11.2 19.3 1 19 716 734 716 734 0.98

7 13 9.2e-05 1.3 10.3 14.4 4 18 782 796 775 797 0.86

8 13 0.0063 88 4.4 3.2 1 8 837 844 837 845 0.93

9 13 8.4e-10 1.2e-05 26.4 15.5 1 18 864 881 864 882 0.97

10 13 3 4.1e+04 -4.1 0.9 6 10 911 915 911 916 0.81

11 13 3 4.2e+04 -7.6 9.7 10 18 929 938 918 939 0.76

12 13 1.5e-07 0.0021 19.2 13.4 1 16 975 990 975 1000 0.91

13 13 3.7e-07 0.0051 18.0 14.1 1 19 1007 1026 1007 1026 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3	4.2e+04	-4.3	1.6	15	19	560	564	559	564	0.81
2	13	0.12	1.6e+03	0.4	0.2	4	10	593	599	592	601	0.95
3	13	2.9e-05	0.41	11.9	16.7	1	19	605	622	605	622	0.93
4	13	3.5e-05	0.48	11.7	10.6	3	19	660	676	658	676	0.91
5	13	2.2	3.1e+04	-3.7	0.6	7	11	680	684	680	684	0.87
6	13	4.8e-05	0.67	11.2	19.3	1	19	716	734	716	734	0.98
7	13	9.2e-05	1.3	10.3	14.4	4	18	782	796	775	797	0.86
8	13	0.0063	88	4.4	3.2	1	8	837	844	837	845	0.93
9	13	8.4e-10	1.2e-05	26.4	15.5	1	18	864	881	864	882	0.97
10	13	3	4.1e+04	-4.1	0.9	6	10	911	915	911	916	0.81
11	13	3	4.2e+04	-7.6	9.7	10	18	929	938	918	939	0.76
12	13	1.5e-07	0.0021	19.2	13.4	1	16	975	990	975	1000	0.91
13	13	3.7e-07	0.0051	18.0	14.1	1	19	1007	1026	1007	1026	0.96

Sequence Information

Coding Sequence: ATGTCTACAGATTCAAAATCTCAATCTTCTTCCCAACCACCCCTATCACAGTTGTGGACGGGTTTTGGCTCTACAACATCCGACCTCAGTAACCCTCTGGAACATCAGCAAACAAATCAGTCATTGTTGTACTCAGGCTtggaaaaagaacaaaaacagcCGAATAATAATTATGtgaatttcaatcaatttataatGCAACATAATCTTACATCACCGCATCAATCGAAATCGCCCATGTCCTCATCTCTAGAAGATACATATGGCAATCAAGAGGGACAAAATTCCAATTACGATGAcgtatttaatattattcacAACATTGGAGatgtgaataaaaatgttagtaCTAAAGGCTATAACAAAATCAGCAGCAATGTCGGTTCAGTTGTCAGGAATAACAGTGACAGCAGTAGTTATAATCTTGAACAGCCGCAGCTCAAATATCAACAATATAATTTTTTTAAACCATCTCTACCCCAATATCCATTTGCCAATGATCGAATATCCAATAACAATAGTGTCTTTTCGGATGGTTTACATAACTACAACATCAATCCCAGTGTAGGCGCTGGTGTTCCAAATTTAGATATCAATCCAATAACATCTTCATCAGGAAATCAACAAAGTTTTTTCGATTCGTCAAATTCATATAGTAATTTTCATGGCAACGGCACCACTTATTATGCCAATCCGTTTGCCACTGGTTTTGATTTCTCCAATACCAAACTGCAGATTAATGCTCCTGAATTTGTGCCCAGATTTGATAAACTTTCGTTGAACGAAACCGCTCAAGAATCAAAACCGCAAACGGAGAGTATTGCTTTAAACTTTGAAACCATAAATGGCAAATTTATCAGGTCACAAGACGACAGTGGGGGGCGAGATGTTTTCGCTTCAGATGATGTTAAAAATACAGAGCAAAATATTGataatagttttgaaaaagaagaaaaacgcCAGCAGCAGAGACACGAACGCACCCGAGGTAATAACCGTCATCAAAGTAAGCATGACAAAGAAAATAAGAGAAGTAATAATCAATTGGAAAAGAATATGGAAAGATTTTCAagaaatttacatgaaaagcaGCAAAATAATGATTCGGCTTCAAACTCTAACTCTTCCACGCCGTCATTAACTATGAATGACGGTCAAGACAAGGCTGgagataaaaacaattataataaacGTTATCAAAATGGAAGACGTTCCGAAGATTTTTCAGAGCGTGAAGATCGCTTTGAACGTTATGTAGAACGTGGTGAACGTTCTGAACGTGGTCACAACCAGCGCAATCAACAGCGCAATGATTATCATCAACGTTATGACAATTATCGCAGCAATAAAAGGCGTGATGATTGGAATCGTAATCGCGATCGCATAAATGGCTATCGCGTAGAAGAAAAATATTCCAACGACAATGGCAAAGAAAGTCCTTTGCCTTCTCGAGAAAAGCGATCACCTAGAAAGTCTTACGataaagaaaacgaaaagtTTTCTCAGAGAGAGAAACTTATAAGAGATATAGAAACTAGACGTTTAGAATGTTTGGTTTGCGTTGAACCCATTAAGGCTCATCAGGGGGTTTGGTCTTGTCACAGTTGCTATCATATACTCCACTTGCAGTGTATAATAAAATGGGCATCTTCCTCAAAATCGGATAATGGATGGCGCTGCCCGGCTTGTCAGAATGTTGAAAAAGATGTTCCTCGTGACTACTATTGTTTCTGTGGCAAATTGAAAAATCCTCTAAATAATCGCCAGGATATTCCTCATTCTTGTGGTGAAGTTTGTGGTCGCGTAGAGGGTTGTTCCCATGCCTGTACTCTACAGTGTCATCCAGGGCCATGTCCTCCCTGTCAGGCTCAAGTTAAGCGAGAATGTGGTTGTGGCAAGACATCAAAAATCATGCAATGTTGTGTTAAAGAAACCATAGAATGTGATTCAACTTGTGAAAAACTATTGAACTGTGAATTACACATCTGTCTGGAGAAATGCCATGAGGGGAAATGTCCTGCTTGTAAGGAGAAAGTAGAGCAGAAGTGTCATTGTTCTAAACAGGAAAGACAAGTAACTTGCACACGCGAATCCCATGACAAACATAACTATTCGTGTGGCAAACCTTGTGGCAAGGATTTAAGCTGTGGCAATCATAAATGTAAAGACTGTTGCCATCCCAATGAATGTAGACCCTGTAAATTGAGTCCTGATTACGTGACTTCTTGTCCATGTGGCAAAATGCCAATTATAAGTGAACAGCGTAAATCTTGTTTAGATCCCATACCTGTATGCGAAGGAGTTTGTGGCAAAACATTGAAGTGTGGCAAAGCCAGCAACCCTCACCACTGTACAACTAAATGCCATTTGGGAAATTGTCCGCCTTGCAACAAACAGACAGCTGTCAAGTGCCGCTGCGGTCATATGGACCAAATGATTAAATGTCGTCAACTGTCGACAAGAGCCGATGACGCTAGATGCAAGAAACGATGCACCAAAAAACGTTCATGCGGCAAACACAAGTGTAATCAAGAATACTGCATAGACATAGATCACTTTTGTCCACTGCCTTGTAATTATACGCTCTCTTGTGGTAAGCACAAGTGTGATCAACCTTGTCATCGGGGCAATTGTCCGCCCTGTTATCGTTCCTCATTCGAAGAACTCTTTTGTGAGTGTGGTGCTGAAGTTATCTATCCTCCAGTTCCTTGTGGCACTAAACGTCCCGTTTGCAAACGCCCTTGTTCGCGTAAACATCCCTGCGATCATCCTCCACAACATAACTGCCATTCGGCTGCCACTTGTCCTCCATGCATGATGTTCACCACAAAATGGTGTTTTGGCCAGCATGAACAGCGTAAAACCATTCCGTGTTCTCAGCAAAGTTTCTCGTGCGGTTTAGCATGCAATAAGCCTTTGCCGTGTGGGCGCCATAACTGCATTAAAACTTGTCATGAGGGACCATGTCAAATGGTCGgtgaaatatgtaaacaaagctGTACTACAGCGCGTGCCACTTGCGGCCACAAGTGCAATGCACCATGCCACAATGGAGATTGTCCAGAGGCTCCTTGTAAAGAAATGGTTGAGGTTCAATGCGAATGCGCCAATCGCAAACAAATGCGCACTTGCGCTGAATTGGCTAGAGAATTTAGTCGCATAGCAACGGCGCAATTGGCCTCTTCTATGGCTGAATTGCAGCGTGGCAATTATATGGAACTTTCTGAAATTTTAGCTCCTGTCAAATTATCTGGAAAATCTAATAAAACTTTAGATTGCAACGAAGAATGCCGTCTTCTTGCACGTAATCGACGCTTGGCTATTGGCCTACAAATACGCAATCCTGATTTGCCATCAAAACTTCAAACTAAATATTCTGATTTTACACGAAACTTTGCCAAACGTGATCCAGCCTTGGTCAAATCTATACATGAAGCACTAACTACTCTGGTGAAATTGGCCaaagaaagtaaacaaaaatcacGCTCATATTCTTTTCCCACTATGAATCGTGAAAAAAGGCAATTGGTAcatgaaatgtgtgaaatgttTGGTGTAGAATCGGTTGCCTATGACGCAGAACCCAATCGGAATGTGGTAGCCACCGCTTATAAGGATAGAtCTTGGCTTCCTGCTTCTAGTATTATGGAAGTAATCGCTCGTGAGGCTGGCCAAAGACGTGTGCCAGTGCCAAGTAATAATGCCTGGGGCTTAAAGAGATAA
Protein Sequence: MSTDSKSQSSSQPPLSQLWTGFGSTTSDLSNPLEHQQTNQSLLYSGLEKEQKQPNNNYVNFNQFIMQHNLTSPHQSKSPMSSSLEDTYGNQEGQNSNYDDVFNIIHNIGDVNKNVSTKGYNKISSNVGSVVRNNSDSSSYNLEQPQLKYQQYNFFKPSLPQYPFANDRISNNNSVFSDGLHNYNINPSVGAGVPNLDINPITSSSGNQQSFFDSSNSYSNFHGNGTTYYANPFATGFDFSNTKLQINAPEFVPRFDKLSLNETAQESKPQTESIALNFETINGKFIRSQDDSGGRDVFASDDVKNTEQNIDNSFEKEEKRQQQRHERTRGNNRHQSKHDKENKRSNNQLEKNMERFSRNLHEKQQNNDSASNSNSSTPSLTMNDGQDKAGDKNNYNKRYQNGRRSEDFSEREDRFERYVERGERSERGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGYRVEEKYSNDNGKESPLPSREKRSPRKSYDKENEKFSQREKLIRDIETRRLECLVCVEPIKAHQGVWSCHSCYHILHLQCIIKWASSSKSDNGWRCPACQNVEKDVPRDYYCFCGKLKNPLNNRQDIPHSCGEVCGRVEGCSHACTLQCHPGPCPPCQAQVKRECGCGKTSKIMQCCVKETIECDSTCEKLLNCELHICLEKCHEGKCPACKEKVEQKCHCSKQERQVTCTRESHDKHNYSCGKPCGKDLSCGNHKCKDCCHPNECRPCKLSPDYVTSCPCGKMPIISEQRKSCLDPIPVCEGVCGKTLKCGKASNPHHCTTKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQEYCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHNCIKTCHEGPCQMVGEICKQSCTTARATCGHKCNAPCHNGDCPEAPCKEMVEVQCECANRKQMRTCAELAREFSRIATAQLASSMAELQRGNYMELSEILAPVKLSGKSNKTLDCNEECRLLARNRRLAIGLQIRNPDLPSKLQTKYSDFTRNFAKRDPALVKSIHEALTTLVKLAKESKQKSRSYSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPASSIMEVIAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398115;
90% Identity: iTF_00760678;
80% Identity: -