Basic Information

Insect: Linnaemya vulpina
Gene Symbol: stc_1
Assembly: GCA_963675445.1
Location: OY776276.1:12596357-12601754[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 4.4e+04 -4.4 1.6 15 19 597 601 596 601 0.81

2 13 0.084 1.8e+03 0.3 0.4 4 10 630 636 629 636 0.95

3 13 2e-05 0.44 11.9 16.7 1 19 642 659 642 659 0.93

4 13 2.5e-07 0.0055 17.9 13.2 3 19 697 713 695 713 0.91

5 13 0.018 3.9e+02 2.4 20.8 1 19 753 771 743 771 0.85

6 13 1.8e-05 0.39 12.0 14.4 4 18 819 833 812 834 0.86

7 13 0.0083 1.8e+02 3.5 9.3 1 11 874 884 874 885 0.96

8 13 2 4.4e+04 -4.7 1.1 4 10 889 895 889 895 0.58

9 13 5.8e-10 1.3e-05 26.4 15.5 1 18 901 918 901 919 0.97

10 13 2 4.4e+04 -4.1 0.9 6 10 948 952 948 953 0.81

11 13 2 4.4e+04 -7.6 9.7 10 18 966 975 955 976 0.76

12 13 1.6e-08 0.00036 21.7 10.8 1 16 1012 1027 1012 1034 0.92

13 13 2.5e-07 0.0055 17.9 14.2 1 19 1044 1063 1044 1063 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	4.4e+04	-4.4	1.6	15	19	597	601	596	601	0.81
2	13	0.084	1.8e+03	0.3	0.4	4	10	630	636	629	636	0.95
3	13	2e-05	0.44	11.9	16.7	1	19	642	659	642	659	0.93
4	13	2.5e-07	0.0055	17.9	13.2	3	19	697	713	695	713	0.91
5	13	0.018	3.9e+02	2.4	20.8	1	19	753	771	743	771	0.85
6	13	1.8e-05	0.39	12.0	14.4	4	18	819	833	812	834	0.86
7	13	0.0083	1.8e+02	3.5	9.3	1	11	874	884	874	885	0.96
8	13	2	4.4e+04	-4.7	1.1	4	10	889	895	889	895	0.58
9	13	5.8e-10	1.3e-05	26.4	15.5	1	18	901	918	901	919	0.97
10	13	2	4.4e+04	-4.1	0.9	6	10	948	952	948	953	0.81
11	13	2	4.4e+04	-7.6	9.7	10	18	966	975	955	976	0.76
12	13	1.6e-08	0.00036	21.7	10.8	1	16	1012	1027	1012	1034	0.92
13	13	2.5e-07	0.0055	17.9	14.2	1	19	1044	1063	1044	1063	0.96

Sequence Information

Coding Sequence: ATGTCTACAGATTCGAAATCTCCATCTTCTTCACAACCTCCACTCTCTCAACTTTGGCCGGGTTTTGGTTCTTCAACATCTGATCTCAATAACCCTTTGGAACATCAACAATCCAATCAGTCATCATCACTTTTGTATTCAGGATTGGGAAAACAACAACAGGCGAATAACAATAACTACGTAAATTTCAATCAGTTTATAATACAACACAATCTTGCACCAACGCATCAATCTAAACCGACAATTTCTTCATCCCTGGAAGATACATATTTACATCAACAGGGGCTAAACACTAATTATGATgatgtatttaatattattcacaaCATAGGAGGCATGAGCAACAATATTGGTGTAAAAGACAATAacaacatcaacagcaacaTCGGTCCTATTGCCAGTAATAACAGTGACACAGTTAATTCCAATCATCAGCTTAAATATCAACATTACAATTTTTTTAATCCATCGCTGCCCCAATATCCATTTGCCGATAATCAAATttccaataacaacaacagtatATTTTCGGATGGTTTACATAATTACAGCATCAATGCCAATATAGGAGGAGCTGGAACTCCGAAATCTGCTATCACTGCAACATCATCTCTAACAGGAAATCAAAACTATTATGATTCGTCAAATTCATACAGTAATTTTCATGCTAACGGTACCACATACTATGCTAATCCCTTTGCTACAGGTTTTGAtttttgtaatacaaaattGCAAATTAATGCACCTGAATTTGTGCCCAGATTTGACAAACTTTCGTTGAACGAAACTGCTCAAGAAGCACAACAACAAACGGAGGTTATTCCTTCAAACTTTGAAACCGTAAACGATATGTTTTCACAGCCAAAAGATCTATATAAAGGACAAGATACTGCCACATTAAGTGATTTTAAACCTACAGAAGAAGATATTGATTCTTCGTTTGAAAAAGAGGAGAAACGGCAACAGCAAAGGCATGAACGCGCTCGAGGTAATAACCGTTATCAAAATAAACatgacaaagaaaataataagaaaaataatagtcGCTTGGAAAAGAATATGGAGAGATTTTCCAGAAATATACAAGACAAGCCACAAAATAATGACTCGGCTTCAAACTCTAATTCTTCAACACCTTCCTTAACTATAAACGGTAAGGAACGAGATAACCAAAATCAAGGAGCTTCTAAATACACTGGCGCTTTTAGCAAAGGCCAGCGCGTATCTATAAATGGTAATGGTGACAAACAAAGAAATTCCGATAGTCAGGACAAGGTTgcagataaaagcaattatCAAAAGCGTTATCAAAATGGTAGACGTTCTCAAGATTTTTCAGAACGTGAAGATCGCTATGAACGTTATGTAGAGCGAGGTGAACGTTCTGATCGTGGCCATAACCAACGTAATCAACAACGTAACGATTATCATCAACGTTATGATAATTACCGCAGTAATAAAAGACGAGATGATTGGAATCGTAATCGTGATCGCATAAATGGTTTTCGCGTGGAAGAAAAATACTCCAATGACAATGGAAAAGAAAGTCCTTTGCTTTCCCCTGAAAAGCGATCACCTAGAAAGTCTTATGATAAAGAAAACGAAAAGCTTTCTCAAAGAGAGAAACTTATACGAGACATAGAGACCAGACGTCTAGAATGTTTGGTGTGTGTTGAACCCATTAAGGCTCACCAGGGAGTTTGGTCTTGTCATAGTTGCTATCATATACTCCATTTGCAGTGCATaataaaatgggcttcatcctCAAAATCTGATAATGGCTGGCGCTGTCCAGCTTGTCAGAATGTTGAAAAAGATGTTCCTCGTGACTACTATTGTTTCTGTggcaaattgaaaaatccacCAAATAATCGTCAAGATATTGCTCATTCGTGTGGAGAAGTTTGTGCTCGCGTGGAAGGCTGTTCTCATGCCTGTACTTTGCAATGTCATCCAGGACCATGCCCTCCCTGCCAGGCTCACGTTAAGCGTGAATGCGGTTGTGGCAAGACTTCAAAAATAATGCAATGTTGTGTCAAGGAAACCATAGAATGCGATTCAATTTGTGAAAAGCTATTAAACTGTGAATTACATACTTGCCAGGAGAAATGTCATGAGGGGAAGTGTCCTGCCTGTAAGGAAAAAGTAGACCAAAAGTGTCATTGTTCTAAACAGGAGAGGCAAGTAACTTGCACACGGGAATCCCATGACAAACATAGTTATTCATGTGGCAAAACTTGTGGCAAGGACTTAAGCTGTAAGAATCATAAATGTAAAGACTGTTGCCATCCCAATGAATGTAAACCTTGTAAATTGAGTCCTGATTATGTCACTTCTTGTCCATGTGGTAAGATGCCAATTGTAAGTGAGCAGCGTAAGTCTTGCTTGGATTCTATACCGGTTTGTGAAGGTGTATGTGGCAAAACTTTGAAATGCGGCAAAGCCACCAATCCTCACCACTGTACATCTAAATGCCATTTGGGGAATTGTCCCCCTTGCAATAAACAGACAGCTGTCAAGTGCCGCTGTGGTCATATGGATCAAATGATAAAATGTCGTCAACTGTCGACACGAGCCGATGACGCTAGATGCAAGAAACGTTGTACCAAAAAACGTTCATGTGGCAAACACAAGTGTAATCAAGAATGCTGCATAGACATCGATCACTTTTGTCCACTGCCTTGCAATTATACACTCTCTTGTGGCAAACATAAGTGTGATCAACCCTGTCACAGGGGCAATTGTCCGCCCTGTTATCGTTCATCTTTCGAAGAGCTCTTTTGTGAGTGTGGAGCTGAAGTTATCTATCCTCCTGTGCCCTGCGGCACCAAACGTCCTGTTTGCAAACGCCCTTGTTCGCGTAAACATCCTTGCGATCATCCTCCTCAACATAACTGCCATTCGGCTGCCACCTGTCCTCCTTGTATGATGTTTACCACAAAATGGTGTTTTGGCCAGCATGAACAACGTAAGACTATTCCGTGTTCTCAACAAAGTTTCTCTTGCGGTTTGGCATGCAACAAGCCGTTGACTTGTGGTCGCCACAACTGCATTAAAACCTGTCACGAAGGTCCATGCCAAATGGCTGgagaaatttgtaaacaaaactgTGCTACAGCACGTGCAACTTGCGGACACAAGTGTATGGCACCATGTCACAGTGGTGATTGCCCAGAGACTCCTTGTAAAGAAATGGTTGAGGTGCAATGCGAATGCGCCAATCGCAAACAAATGCGCACTTGTGCTGAATTAGCTAGAGAATTCAGTCGCATAGCTACGGCCCAATTGGCCTCTTCCATGGCTGAAATGCAGCGTGGCAACTATATGGAACTATCCGAAATATTAGCTCCTGTTAAACTCTCTGGAAAATCTAACAAAACCTTAGATTGTAATGAAGAATGTCGTACGATCGCTCGTAATCGTCGTTTGGCTATTGGCCTACAAATACGCAATCCTGATTTGCCATCAAAACTTTCAACGAAATATTCTGATTTTATACGAAACTTTGCTAAACGTGATCCAGCATTGGTTAAGTCTATACATGAAGCTTTAACTACTCTGGTGAAGTTGGCTAaagaaagtaaacaaaaatcgcgATCGCATTCGTTTCCCACTATGAACCGTGAAAAGAGACAGTTGGTACATGAAATGTGTGAAATGTTTGGTGTTGAATCGGTTGCCTATGATGCAGAACCCAATCGCAATGTGGTAGCCACCGCTTATAAGGACAGAtcTTGGCTCCCTGCTTCTAGTATTATGGAAGTAATAGCACGTGAGGCTGGCCAAAGGCGTGTGCCAGTGCCAAGTAATAATGCCTGGGGTTTGAAGAGATAA
Protein Sequence: MSTDSKSPSSSQPPLSQLWPGFGSSTSDLNNPLEHQQSNQSSSLLYSGLGKQQQANNNNYVNFNQFIIQHNLAPTHQSKPTISSSLEDTYLHQQGLNTNYDDVFNIIHNIGGMSNNIGVKDNNNINSNIGPIASNNSDTVNSNHQLKYQHYNFFNPSLPQYPFADNQISNNNNSIFSDGLHNYSINANIGGAGTPKSAITATSSLTGNQNYYDSSNSYSNFHANGTTYYANPFATGFDFCNTKLQINAPEFVPRFDKLSLNETAQEAQQQTEVIPSNFETVNDMFSQPKDLYKGQDTATLSDFKPTEEDIDSSFEKEEKRQQQRHERARGNNRYQNKHDKENNKKNNSRLEKNMERFSRNIQDKPQNNDSASNSNSSTPSLTINGKERDNQNQGASKYTGAFSKGQRVSINGNGDKQRNSDSQDKVADKSNYQKRYQNGRRSQDFSEREDRYERYVERGERSDRGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYSNDNGKESPLLSPEKRSPRKSYDKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQGVWSCHSCYHILHLQCIIKWASSSKSDNGWRCPACQNVEKDVPRDYYCFCGKLKNPPNNRQDIAHSCGEVCARVEGCSHACTLQCHPGPCPPCQAHVKRECGCGKTSKIMQCCVKETIECDSICEKLLNCELHTCQEKCHEGKCPACKEKVDQKCHCSKQERQVTCTRESHDKHSYSCGKTCGKDLSCKNHKCKDCCHPNECKPCKLSPDYVTSCPCGKMPIVSEQRKSCLDSIPVCEGVCGKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLTCGRHNCIKTCHEGPCQMAGEICKQNCATARATCGHKCMAPCHSGDCPETPCKEMVEVQCECANRKQMRTCAELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSGKSNKTLDCNEECRTIARNRRLAIGLQIRNPDLPSKLSTKYSDFIRNFAKRDPALVKSIHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPASSIMEVIAREAGQRRVPVPSNNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398115;
90% Identity: iTF_00900222;
80% Identity: -