Paur028901.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- OY757281.1:4947165-4949528[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0023 1.7 9.6 0.5 18 43 9 31 7 32 0.94 2 20 1.6 1.2e+03 0.5 0.3 17 43 36 59 33 60 0.72 3 20 0.0015 1 10.2 0.4 18 43 68 90 63 94 0.87 4 20 0.00027 0.19 12.6 0.8 15 44 96 122 91 122 0.91 5 20 0.01 7.3 7.5 1.0 18 43 129 151 125 152 0.92 6 20 0.00035 0.25 12.2 4.6 11 43 152 181 149 182 0.85 7 20 0.0019 1.4 9.9 1.1 17 43 187 210 183 212 0.89 8 20 0.012 8.9 7.3 3.1 14 30 215 235 211 243 0.70 9 20 0.89 6.3e+02 1.3 0.8 18 44 262 285 254 285 0.84 10 20 1.4 9.9e+02 0.7 0.3 18 43 313 335 304 336 0.78 11 20 5.6 4e+03 -1.2 1.1 17 29 342 354 325 360 0.61 12 20 2.5 1.7e+03 -0.1 0.0 15 27 369 381 366 395 0.78 13 20 0.0022 1.6 9.7 3.6 10 43 411 441 408 442 0.89 14 20 1.1 7.9e+02 1.0 9.7 11 29 441 459 434 471 0.70 15 20 0.0048 3.4 8.6 2.5 12 43 471 499 462 500 0.78 16 20 0.12 87 4.1 0.8 17 44 505 529 501 529 0.85 17 20 4.4 3.1e+03 -0.9 0.8 18 28 536 546 533 559 0.82 18 20 1.2 8.5e+02 0.9 0.1 19 43 567 588 561 589 0.83 19 20 0.00016 0.12 13.3 2.6 18 44 632 655 616 655 0.81 20 20 3.8 2.7e+03 -0.7 0.2 14 27 701 714 688 716 0.68
Sequence Information
- Coding Sequence
- ATGTATCAAAACCTCCTCGACTTCGTCTGCGATTATTGTGGCCGCGCGTTCACCAGGAAATACAACCTCCAGACCCACATCGAGAACTGCCATCTTACATCATCATGCTACTGCGAAATTTGCGAACAAACATTCGGCAGCCCAGCTGGTTTACAGCTCCATCTCTCTCGAGGCCACAACAGATATGGACATTCGTCACCAGAATGTGATATATGCGGAAACATCTTTACGCGAAAACAGAACATCATATCCCATATGCTCACTGTTCATTTACAAGGAAATGGAACAAGCACTCGTTGTCAATTGTGCGACAAAGTATTTTCGACCGAACGGAATTTGAGAAGACACATCAATCAGTTCCATAACCCAGATGTTAAGCAGCCTACGTGTAACGAATGTAACAAAGTATTTAAAAGCAAGCACTCTTTGATCGCTCATATCGAGGCAGCACACATTACGGAGAAAGGTATTATCAAGTGTCATCTGTGCGAGAAAGTATACACGAATAATAGGAATTTGAAAAGACATATCGAGATGTATCATGGAGAAAAAGGAGAGTTCCGATGCGATGTATGCCCTAAAGTGTACACGTCAAATCAGAGCTTACGCAGACACATCAGAACTAGACATCACTCGGATGACGATGAAGAGTGTACGTGCGAATATTGTAACAAAGTCATATCTGGCAGAGAAAACTACAACAGCCACATATCATTCTTCCACAAACACGACACCAATTCAGTGGACTGCAGCGATGTTGTATCTTCCAAAACTCACGATTACATCTGTGTTTCCTGCTCAAACACTTTTGAAGATGAATCGCAGTTACGACATCATGTCAAAACCGAACATTCCTTCAAAGATTTCTACAAGTACTGCAAGAAATCCCTTCTAAAGCAAATAGGCAAACCTAAATCCCAGAAAATGGTATCTTACAACTGTGAATATTGTACCAACTCGTTTGGAAGCGTCTACGAGTTCAAAGACCACATGAGAATCAACCACGACAAAGAATACTCTCTCTCCACCTGCAATGTTTGTTTTAACAAATTCTACAGTAAAGAATCCATGTCGAAACACAGAAAGGTGTGCTTACCACCGCCAAATGTAAACCCTTGCAGCCATTGCGATAAGCTATTCACAGATATATCGAGTTTGGAGTTCCATACTCGTATCTTTCACCCGCAAGCTCAAATAGCGGATTCGAACATCACTTCAACAAACTTTGATGATTCGTTGGACAGCAACTCTTACAAATGCAAGCACTGCGACCGCGTCTACTACTCGGACAGGTCATTAAAACATCACATAAAGTTGAAACACACGACAGATGAAGCAATGCAGTGTGGGTACTGCGGGAAAATATGCAGCAACAAATATTATTTGGCTTCGCACATCAAAATCGTTCACAACAACGACTCTTGGTCCAAATGTGACTATTGCGATAAACAGTTTAAATCCAAGAGAAATATTCGGAGGCACATTGAGTATACTCATTTGGGTATGCAGCGGTATAAGTGTATCGAGTGTGAGACTCTGTTTAAAGAGAAGAGGAGCTTGCGAAAGCATGTGCGAACGAAGCACCCCAACTCGGCCATGTTTCCTCAGTGCCACATTTGCCAGAAGAGGTTTGAGTCGGCCAAATCTTGCAAGATACATTTGAAGCTTCTCCATTCTTTCAACATGAATACTTTCCCTTGCGACTTGTGCTCCGTTTCGTTTAGTTCGAAGGAGGCGTTGACGATTCATTTGCAAACGAAACATTTGGCTGAAGATGAGATCTACAAGTGCGAAGATTGCAACTTGGTCTTCAAAGGACAGGAGAAGTTTGACAAGCACAACGAACTGTGCCATGTAAACACTATGCCTGATATAAAGCAAAAGGTGTTACCGCGCTGCATTATTTGCATGAAGGATTTCAGCACaagaaaaactttaaaaagacaCATTAAGAAGTTCCACAATGAGTTTGATGTGGACGAGTTGGCGAATTTCGGTACCCGCCGACGCGTTTTCTACGTCGACTGCGATGAGTGTGTAAAGAAGTTTGGCGACGATTTTCACTTCAATTTGTACCAGAAGTTGAAGCATTTGAAGGAGTCGGTTATTTTCAAATGCGAAATTTGCTCAACGTCGTACAATTCTTTGGAGTATTTAATACAGCGGTATAGACTTACGAGCGATGATTCTGGGAAAGGGAAGATGATCTTGAGCGAGCTGTGCACAGCAGAAATGAGTGATGAGGAATCTTCGTACACTGGTTTTGGATCATTGCATGAAATGATGGAACCAGAAAGTACTACGACCGATGTCAAAATAGAGCCGATTGATGAGGATATAAAGATGGAGCCTGAGTCTCCGTAG
- Protein Sequence
- MYQNLLDFVCDYCGRAFTRKYNLQTHIENCHLTSSCYCEICEQTFGSPAGLQLHLSRGHNRYGHSSPECDICGNIFTRKQNIISHMLTVHLQGNGTSTRCQLCDKVFSTERNLRRHINQFHNPDVKQPTCNECNKVFKSKHSLIAHIEAAHITEKGIIKCHLCEKVYTNNRNLKRHIEMYHGEKGEFRCDVCPKVYTSNQSLRRHIRTRHHSDDDEECTCEYCNKVISGRENYNSHISFFHKHDTNSVDCSDVVSSKTHDYICVSCSNTFEDESQLRHHVKTEHSFKDFYKYCKKSLLKQIGKPKSQKMVSYNCEYCTNSFGSVYEFKDHMRINHDKEYSLSTCNVCFNKFYSKESMSKHRKVCLPPPNVNPCSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNFDDSLDSNSYKCKHCDRVYYSDRSLKHHIKLKHTTDEAMQCGYCGKICSNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAMFPQCHICQKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSKEALTIHLQTKHLAEDEIYKCEDCNLVFKGQEKFDKHNELCHVNTMPDIKQKVLPRCIICMKDFSTRKTLKRHIKKFHNEFDVDELANFGTRRRVFYVDCDECVKKFGDDFHFNLYQKLKHLKESVIFKCEICSTSYNSLEYLIQRYRLTSDDSGKGKMILSELCTAEMSDEESSYTGFGSLHEMMEPESTTTDVKIEPIDEDIKMEPESP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01282602; iTF_01279500; iTF_01282589; iTF_01281532; iTF_01125675; iTF_01124781; iTF_01124790; iTF_00075767; iTF_01125659; iTF_00076806; iTF_01280607; iTF_01280623; iTF_00074732; iTF_00074757;
- 90% Identity
- iTF_01282602; iTF_01279500; iTF_01282589;
- 80% Identity
- iTF_01279500;