Acro026053.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438876.1:7915174-7917570[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 5.6e-06 0.00062 21.3 3.2 1 23 8 31 8 31 0.95 2 22 0.0014 0.15 13.8 1.1 2 23 37 59 36 59 0.94 3 22 0.00096 0.11 14.3 0.1 2 23 68 90 68 90 0.96 4 22 2e-05 0.0022 19.6 0.7 2 23 99 121 98 121 0.95 5 22 1.7e-05 0.0019 19.8 0.8 2 23 129 151 129 151 0.95 6 22 6e-06 0.00066 21.3 2.4 2 23 160 182 159 182 0.96 7 22 2.5e-07 2.8e-05 25.6 1.2 1 23 188 211 188 211 0.98 8 22 0.0047 0.52 12.1 1.6 1 23 219 242 219 242 0.92 9 22 0.026 2.9 9.8 0.5 1 23 270 293 270 293 0.95 10 22 0.00029 0.032 15.9 1.6 1 23 321 344 321 344 0.98 11 22 0.46 51 5.9 0.8 2 21 352 371 351 372 0.93 12 22 0.013 1.4 10.8 1.4 3 23 382 403 381 403 0.95 13 22 0.0032 0.35 12.7 6.5 1 23 427 450 427 450 0.97 14 22 1.2e-05 0.0013 20.3 0.6 2 23 457 479 456 479 0.96 15 22 3.8e-05 0.0042 18.7 2.2 2 23 486 508 485 508 0.94 16 22 0.0088 0.97 11.3 2.2 1 23 514 537 514 537 0.97 17 22 0.22 25 6.9 7.1 2 23 545 567 545 567 0.95 18 22 0.00016 0.018 16.8 0.2 1 23 574 597 574 597 0.97 19 22 0.011 1.2 10.9 2.0 1 22 604 625 604 627 0.90 20 22 0.02 2.3 10.1 2.7 3 23 642 663 641 663 0.91 21 22 3.1 3.5e+02 3.2 0.6 3 16 685 698 684 700 0.85 22 22 0.87 97 5.0 0.1 1 17 713 729 713 730 0.90
Sequence Information
- Coding Sequence
- ATGTATCAAAACCTCCTGGATTTCGTTTGCGATTACTGCAGCCGGGCTTTCACAAGGAAATACAACTTGCAAACTCACATTGAGAATTGTCATCTAACAGCGTCATGTCATTGCGAAATTTGCAACCAAACCTTTGGGAGCCCGGCGGGCCTTCAGCTCCACCTGTCCCGTGGCCACAACAGATACGACCAGCCTTCTCCCGAATGCGACATCTGTGGGAATATCTTTGCTCGTAAACAGAACATTATATCCCATATGATATCTGTGCACCTCCAGGGCGCAGGGCAAGGCATCCGTTGTGGGCTTTGCGATAAATTATTCACAACTGAATGGAACTTGAAAAGGCATATGAACCAGTTCCACAACCCCGATGTCCGGTTTCCGACTTGCAACGATTGTAACAAAGTTTTTAAAGGTAAACATTCACTGATCGCTCATATACAGGCAATGCACAATGTTGCCGAGAAAGGGATCATAAAATGTCATCTTTGCGAGAAAGTTTACACTAACAATAGGAATTTGAAGAGGCATATTGAAATGTTTCACGGTGAAAAGGGCGAGTTTAGATGCGACGTGTGTCCGAAAGTTTATACGTCCAATCAGAGTTTGAGGCGGCACATCAGGACGAGGCATCCCACGACTGACGTTGAGGAGTATACATGTGATTATTGCAACAAAGTTATTTCGGGCAGAGAGAATTTTAACAGCCATACCTCATTCTTCCACAAACAAGACTCGAATTCATTAGATTACAGTGATGTCATGTCTTTAAAAATCAGTGATGTAATTTCTTATAAAACCCACGAATTTAATTGCGTTTCCTGTTCCAAAACGTTCGAAGACGAACCACGTTTGCGGCAGCACGTAAAAAACGAACACTCATTCAAAACTTTCTATCAGTATTGCAAGAAATCTCTGTTAAAGCAAATAGGCCAGCCGAAAAGTCAGAAGTTAGTGTTTTATAACTGCGAGTACTGCAAGAACTCGTTTGGAAGCGTATACGAATTCAAAGACCACATGAGAACGAATCACGATAAAGAGTACTCATTGTCCACTTGTAATGTGtgctttaataaattttacagTAAAGAATCGATGGTCAATCACAAAAAGATATGTCTGCCCCCAGCTAACGTGAATCCTTGTAGCCATTGCGATAAGCTGTTCACTGATGTTTCCAGTTTAGAATTCCATACCCGCATATTTCACCCTCAAGCACAAATTGCCGACTCAAATATCACTTCAACGAACATCGACGATTCTTTAGAGAGCAACTCATATAAATGCAAGCACTGCGATCGTATATATTACAGTGACAGATCACTGAAGCAtcatataaaactaaaacacacGACAGacgaagcaatggagtgtgaaTACTGCGGGAAAATCTGCAGCAACAAATATTACTTGGCGTCGCACATAAAAATTGTCCACAACAACGATTCCTGGTCCAAATGTGATTACTGCGACAAGCAATTTAAGTCTAAGAGAAATATTCGCAGGCACATCGAGTATACGCATTTGGGAATGCAAAGGTATAAGTGCATCGAATGTGAGACGTTGTTCAAAGAGAAGAGGAGTCTCAGGAAGCATGTCCGTACGAAGCACCCGAACTCGGTCATGTTTCCGCAATGTCACATTTGCCATAAGAGGTTCGAATCGGCCAAATCCTGTAAGATACATTTGAAGCTCTTACACTCTTTCAACATGAACACTTTCCCATGCGATTTATGTTCTGTATCATTCAGTTCCAACGAAGCTCTGTCTATACATTTGCAAACTAAGCATTTAGCAGAAGATGAGATTTACAAGTGCGAAGTTTGCAACTTAGTTTTCAAGGGGCAGGAGAAATTTGAACAGCACAACGAGCTTTGCCACGTTAATGTTATGCCGAACGTAAAGCAGAAGATACTCCCTCGTTGCATAATCTGTATGAAGGATTTCAGCACAAGGAAAACTCTGAAGAGACACATCAAGAAGTTCCACGACGAGTTTGAAGTGGATGAACTAGCGACTTTCGGATCGCGGCGTCGAATCTTCAATGTTGACTGCGAAGAATGCGTTAAGAAGTTTAGCGATGATTTCCATTTCACTCTATACCAGAGGTTGAAGCATCTGAAAGAATCCGTGATTTTCAAATGCGAAGTTTGTTCGGCGTCCTACAATTCCTTGGAGTATCTAATACAGAGATATAAACTGACAAATGCCGACTCTGGTAAAGGGAAGATGATACTTAGCGAGTTGTGTACGGCCGAAATGAGTGAAGAGGAATCCTCGTACGCTGGCTTTGGATCACTGCACGAAATGATGGAACCAGAAAGCACGACAAGTGACATTAAAATGGAACCAATGGATGAAGAAACGAACATTAAGATGGAACCAATGTCACCATAG
- Protein Sequence
- MYQNLLDFVCDYCSRAFTRKYNLQTHIENCHLTASCHCEICNQTFGSPAGLQLHLSRGHNRYDQPSPECDICGNIFARKQNIISHMISVHLQGAGQGIRCGLCDKLFTTEWNLKRHMNQFHNPDVRFPTCNDCNKVFKGKHSLIAHIQAMHNVAEKGIIKCHLCEKVYTNNRNLKRHIEMFHGEKGEFRCDVCPKVYTSNQSLRRHIRTRHPTTDVEEYTCDYCNKVISGRENFNSHTSFFHKQDSNSLDYSDVMSLKISDVISYKTHEFNCVSCSKTFEDEPRLRQHVKNEHSFKTFYQYCKKSLLKQIGQPKSQKLVFYNCEYCKNSFGSVYEFKDHMRTNHDKEYSLSTCNVCFNKFYSKESMVNHKKICLPPANVNPCSHCDKLFTDVSSLEFHTRIFHPQAQIADSNITSTNIDDSLESNSYKCKHCDRIYYSDRSLKHHIKLKHTTDEAMECEYCGKICSNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSVMFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSNEALSIHLQTKHLAEDEIYKCEVCNLVFKGQEKFEQHNELCHVNVMPNVKQKILPRCIICMKDFSTRKTLKRHIKKFHDEFEVDELATFGSRRRIFNVDCEECVKKFSDDFHFTLYQRLKHLKESVIFKCEVCSASYNSLEYLIQRYKLTNADSGKGKMILSELCTAEMSEEESSYAGFGSLHEMMEPESTTSDIKMEPMDEETNIKMEPMSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01279494;
- 90% Identity
- iTF_00075767;
- 80% Identity
- iTF_00074732;