Pdes034010.1
Basic Information
- Insect
- Pyrausta despicata
- Gene Symbol
- -
- Assembly
- GCA_963921415.1
- Location
- OY992874.1:6804464-6806824[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.017 12 7.1 0.8 18 43 9 31 7 32 0.94 2 20 4.5 3.1e+03 -0.7 0.5 17 43 36 59 33 61 0.70 3 20 0.037 25 6.0 0.8 16 43 66 90 60 93 0.76 4 20 0.0014 0.97 10.6 0.5 16 44 97 122 91 122 0.89 5 20 0.0036 2.5 9.3 0.4 18 43 129 151 125 152 0.93 6 20 0.00044 0.3 12.2 1.9 13 43 154 181 153 182 0.89 7 20 0.0026 1.8 9.7 1.2 17 43 187 210 183 211 0.89 8 20 0.0033 2.3 9.4 0.3 12 44 213 242 211 244 0.83 9 20 0.24 1.7e+02 3.4 0.3 10 44 253 284 250 284 0.84 10 20 0.08 54 5.0 0.3 14 43 308 334 290 335 0.84 11 20 2.8 1.9e+03 0.0 0.0 15 27 368 380 364 394 0.79 12 20 0.015 10 7.3 2.5 12 43 412 440 407 441 0.87 13 20 2.4 1.6e+03 0.2 9.7 11 29 440 458 433 470 0.70 14 20 0.006 4.1 8.6 2.5 12 43 470 498 461 499 0.78 15 20 0.15 1e+02 4.1 0.8 17 44 504 528 500 528 0.85 16 20 1.5 1e+03 0.9 1.1 18 28 535 545 532 558 0.82 17 20 1.5 9.9e+02 0.9 0.1 19 43 566 587 560 588 0.83 18 20 0.00038 0.26 12.4 1.4 18 43 631 653 615 654 0.84 19 20 1.1 7.3e+02 1.4 0.0 12 29 668 685 663 700 0.80 20 20 9.5 6.5e+03 -1.7 0.1 15 27 701 713 685 714 0.72
Sequence Information
- Coding Sequence
- ATGTACCAGAACCTCCTCGACTTCGTCTGCGACTACTGTAGCAGAGCCTTCACTAGAAAATACAATCTTCAGACGCACATAGAGAACTGTCATCTCAGCGCATCTTGTCGCTGTGAAATTTGCGACCAGACCTTTGGAAGCCCTGCCGGCTTACAACTCCACCTCTCCCGTGGTCACAACAGCAATGGCCAGTCGAAACCGGAATGCGACATTTGTGGACACATTTTCTCGCGAAAACAGAAGATCCTATCTCACATGATCACTGTCCACCTTCAAGGGACAGACCTGAGTACCCGATGTCCGCTCTGCAACAAAGTTTTTACCACTGAATGGAATTTAAAGAGGCATATGAAGCAATTTCACAACCCTGATGTACAGTACCCAACATGTAACAATTGTAACAAAGTGTTCAAAGGCAAACACTCTTTGATTGCCCATATTGAAGCAATGCACGGTTCTGACAAAGGCATCATCAAGTGCCACCTCTGTGATAAAGtttacacaaataatagaaatttgAAAAGACATATTGAAATGTATCATGGGGAAAAAGGAGAGTTTAGGTGCGATGTATGCCCCAAAGTGTATACGTCTAACCAGAGCTTGAGGAGACACATCAGAACCAGGCATCACTCTGAAGATGACGAAGAGTATACGTGTGAATATTGCAGCAAAGTCCTGACTGGTATCGAGAACTATAAGAGCCACATTACGTTCTTTCACAAACATGATAACTCTGTTGACTGCAGTGACGCTGTATCCACAAAGACTCACAATTTCATTTGCGTCGACTGCACAAAAACTTTCGAAGATGAATCGCTGCTACGTCGCCATGTGAAGACTGAGCACTCGTTTAAAACATTCTATAAGTACTGCAAGAAATCACTGCTGAAGCAAATGGGTAGACCGAAAAGCGAAAAACTTGTGTTCTACAAATGCGAATACTGTAACAACTCATTTGGAAGCGTTTACGAGTTCAAAGACCATATGAGAGTCAACCATGACAAGGAATACTCGCTTTCCACGTGCAATGTTTGTTTCAATAGGTTTTACAGCAAGGAATCTATGTCGCAACACAAAAAGATATGCTTACCACCACCCAACGTGAACCCATGCAGTCATTGTGATAAGCTCTTCACAGATATATCCAGTTTAGAATTCCACACGAggatatttcaccctcaagctCAAATAGCCGACTCGAATATAACTTCGACAAACATCGACGATTCTCTAGAGACCACTTCGTACAAATGCAAGTTCTGCGATCGAATATATTACAGCGATCGATCGTTGAAACAccacataaaattaaaacatacgaCAGACGAAGCGATGGAGTGCGAGTATTGTGGTAAAATTTGCAGCAACAAGTATTATTTGGCATCGCACATCAAGATCGTTCACAACAATGATTCCTGGTCGAAATGCGACTACTGCGATAAACAGTTCAAGTCTAAAAGGAACATTCGTCGACACATTGAGTATACGCATTTGGGAATGCAACGGTATAAGTGTATCGAGTGTGAAACTCTTTTTAAAGAGAAGAGAAGTCTCAGGAAGCATGTCCGAACGAAGCATCCCAATTCAGCTATGTTTCCACAATGTCACATTTGCCACAAGAGATTCGAGTCGGCGAAATCTTGTAAGATACATCTGAAACTGCTACACTCGTTCAACATGAACACGTTTCCTTGTGATCTCTGCTCTGTTTCGTTCAGCTCAAAAGAAGCGTTGACGATACATTTGCAAACGAAGCATCTGGCAGAAGACGAGATTTACAAGTGCGAAGTGTGCAACTTGGTATTCAAGGGGCAGGAAAAGTTTGAGCAGCACAATGAGTTGTGCCATGTCAATGTCGTTCCTAATTTAAAGGAGAAGGTGTTGCCGCGCTGCATTTTGTGTATGAAAGATTTCAGCACCAGGAAGACGCTCAAAAGACACATCAAGAAGTTCCACGACGAATTCGAAGTGGATGAACTGGCAAACTTTGGGACACGGCGTCGCGAGTTCAGCGTGGATTGCGACGAGTGTGTGAAGAAGTTTAGCGATGATTACCATTTTGGTCTGTATCAGAGGTTGAGGCATTTAAAAGAGTCTGTCATTTTTAAATGCGAAGTATGTTCCGCTGCGTACAACGCTTTGGAGTATTCGATACAGAGATACAGGTTGAACGACGATACAGGCAAAGGGAAGATGATTTTGAGTGAGCTCTGTACGGCTGAGATGAGTGATGGGGAATCTTCGTATACTGGTTTTGGGTCTTTGCACGAAATGATGGAACCGGAGAGCACGACGAGCGATATTAAAATGGAACCGTTGGACGAGGGTGTGGTCAAGCAAGAGCCGATGTCTCCCTAA
- Protein Sequence
- MYQNLLDFVCDYCSRAFTRKYNLQTHIENCHLSASCRCEICDQTFGSPAGLQLHLSRGHNSNGQSKPECDICGHIFSRKQKILSHMITVHLQGTDLSTRCPLCNKVFTTEWNLKRHMKQFHNPDVQYPTCNNCNKVFKGKHSLIAHIEAMHGSDKGIIKCHLCDKVYTNNRNLKRHIEMYHGEKGEFRCDVCPKVYTSNQSLRRHIRTRHHSEDDEEYTCEYCSKVLTGIENYKSHITFFHKHDNSVDCSDAVSTKTHNFICVDCTKTFEDESLLRRHVKTEHSFKTFYKYCKKSLLKQMGRPKSEKLVFYKCEYCNNSFGSVYEFKDHMRVNHDKEYSLSTCNVCFNRFYSKESMSQHKKICLPPPNVNPCSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNIDDSLETTSYKCKFCDRIYYSDRSLKHHIKLKHTTDEAMECEYCGKICSNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAMFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSKEALTIHLQTKHLAEDEIYKCEVCNLVFKGQEKFEQHNELCHVNVVPNLKEKVLPRCILCMKDFSTRKTLKRHIKKFHDEFEVDELANFGTRRREFSVDCDECVKKFSDDYHFGLYQRLRHLKESVIFKCEVCSAAYNALEYSIQRYRLNDDTGKGKMILSELCTAEMSDGESSYTGFGSLHEMMEPESTTSDIKMEPLDEGVVKQEPMSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01279494;
- 90% Identity
- iTF_01280623;
- 80% Identity
- iTF_01280623;