Afus033262.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- -
- Assembly
- GCA_950371115.1
- Location
- OX493354.1:6583352-6585724[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 5.3e-06 0.00051 21.4 3.2 1 23 8 31 8 31 0.95 2 20 0.00076 0.074 14.6 0.9 2 23 37 59 36 59 0.94 3 20 0.00015 0.014 16.8 0.1 2 23 68 90 68 90 0.97 4 20 5.8e-07 5.6e-05 24.4 0.7 2 23 99 121 98 121 0.95 5 20 1.6e-05 0.0016 19.8 0.8 2 23 129 151 129 151 0.95 6 20 4.8e-06 0.00046 21.5 2.2 2 23 160 182 159 182 0.96 7 20 1e-06 0.0001 23.6 1.7 1 23 188 211 188 211 0.98 8 20 0.046 4.5 8.9 0.1 1 23 262 285 262 285 0.95 9 20 0.0005 0.048 15.1 1.1 1 23 313 336 313 336 0.97 10 20 0.15 14 7.4 0.9 2 21 344 363 343 364 0.93 11 20 0.013 1.3 10.7 1.5 3 23 374 395 373 395 0.95 12 20 0.003 0.29 12.7 6.5 1 23 419 442 419 442 0.97 13 20 1.1e-05 0.0011 20.3 0.6 2 23 449 471 448 471 0.96 14 20 3.6e-05 0.0034 18.8 2.2 2 23 478 500 477 500 0.94 15 20 0.0083 0.81 11.3 2.2 1 23 506 529 506 529 0.97 16 20 0.21 20 6.9 7.1 2 23 537 559 537 559 0.95 17 20 3.7e-05 0.0035 18.7 0.2 1 23 566 589 566 589 0.97 18 20 0.014 1.4 10.6 2.1 1 20 596 615 596 619 0.90 19 20 0.019 1.9 10.1 2.7 3 23 634 655 633 655 0.91 20 20 2.7 2.6e+02 3.4 0.4 2 16 676 690 675 692 0.83
Sequence Information
- Coding Sequence
- ATGTATCAAAACCTTCTCGACTTCGTCTGCGATTACTGCAGCAGAGCATTCACTAGGAAATACAATTTGCAAACCCACATCGAGAACTGTCATCTGACCGCATCATGCCACTGCGAGATTTGCGACCAAACTTTCGGGAGTCCAGCTGGTCTGCAGCTCCACCTGTCCAGGGGCCACAACAGATATGGCCAGCCTTCCCCTGAATGTGACATCTGTGGTAACATATTCACTAGAAAACAGAACATCATATCCCACATGATCACTGTCCATCTTCAAGGAATAGGCCAAGGTATCCGTTGTGAACTGTGCGACAAAGTATTCACGACGGAGTGGAATCTAAAGAGGCATATGAACCAATTTCACAATCCAGATATACAACATCCTACATGTAATGATTGCAATAAAGTCTTCAAGGGTAAACATTCGCTGATCGCCCATATACAGGCAATGCACAATGTCTCTGAAAAGGGGATTATCAAGTGCCATCTGTGTGAAAAGGTGTACACGAACAATAGAAACTTGAAGAGGCATATAGAAATGTATCACGGGGAAAGAGGGGAGTTTAGGTGTGATGTATGCCCTAAAGTGTACACGTCGAATCAAAGCTTGCGTAGACACACCAGAACAAGGCATTACACGACCGATAATGAAGAGTATATGTGTGAATGTTGCAACAAAACTATCTGTGGCATAGACAACTTTAACAGTCATACTTCATTCTTTCACAAACAAGACTCTAACTCGGTGGACTTCAGCGATGTCGTATCTTCAAAAACGCACGAATACATTTGTGTGTCATGCAGCAAACCGTTTGAGGACGAACCCCGATTGCGACAACATGTAAAAAACGAACACTCGTTCAAAACTTTTTATAGCTACTGCAGAAAATCGTTGTTGAAGCAAATAGGTCTACCTAAAAACCAGAAGTTAGTGTTCTACAACTGCGAGTATTGTAAAAACTCTTTTGGAAGCGTCTACGAATTTAAAGATCATATGAGAATAAATCATGATAGAGAGTACTCACTGTCCACTTGTAATGTGTGTTTCAACAAGTTTTACAGTAAGGAATCAATGATAAAACACAAGAAGATCTGTCTACCACCTCCTAACGTCAATCCTTGTAGTCATTGCGATAAACTATTCACTGATATATCCAGTTTGGAATTCCATACCCGGATCTTCCACCCTCAAGCTCAAATAGCTGATTCAAATATCACCTCAACGAACATTGAAGATTCTATGGAGAGCAACTCTTATAAATGCAAGCATTGCGATCGTATATACTACAGTGACAGGTCACTTAAACATCATATAAAGTTGAAACATACAACAGACGAAGCAATGGAATGTGAATATTGCGGAAAAATATGCAGCAACAAGTATTACTTAGCTTCCCACATCAAAATCGTTCACAACAACGACTCTTGGTCCAAATGCGATTACTGCGACAAACAGTTCAAGTCAAAACGTAATATTCGCAGGCATATTGAGTATACTCATTTGGGAATGCAGAGATATAAGTGTATTGAATGTGAAACGTTGTTTAAAGAGAAGAGGAGTCTCAGGAAACATGTCCGAACGAAGCATCCGAACTCGGCTTCGTTTCCGCAATGTCATATCTGCCATAAGAGATTTGAGTCCGCCAAATCCTGCAAGATACATCTGAAGCTTCTGCATTCTTTCAACATGAACACATTTCCTTGCGATCTGTGTTCTGTCTCCTTTAGTTCTAAAGAGGCACTAACAATTCACTTGCAGACGAAGCATTTGGCTGAAGATGAGATTTATAAATGCGAAGTATGCAACTTAGTTTTCAAAGGTCAGGAGAAGTTTGAGCAGCATAACGATCTTTGTCACGTAAATGTAGTGCCTGATGTGAAGCAGAAAATCCTGCCGCGTTGCATCATATGCATGAAAGATTTCAGCACTAGAAAAACTTTGAAAAGACACATCAAAAAGTTCCATGACGAGTTTGATGTGGATGAGCTGGCGACGTTCGGTTCACGTCGTCGAATTTTTAACGTGGAATGTGAGGAGTGCGTTAAGAAATTCAACGATGATTTCCACTTCAATTTATACCAGAAGTTGAAACATTTGAAAGAGTCTGTAATTTTTAAATGCGAAGCGTGTCTGACGTCGTACAATTCTTTGGAGTTTCTGATACAGAGATATAAGTTATCTAACTCTGACTCTGGGAAaggaaaaatgatattgagtgAACTATGTACGGCTGAAATGAGCGATGAGGAATCTTCGTACACAGGTTTTGGGTCGCTACACGAAATGATGGAGCCGGAAAGTACAACGAGCGACATTAAAATAGAACCGATGGATGAGGAGACGAATATTAAGATGGAGCCAATGTCTCCGtag
- Protein Sequence
- MYQNLLDFVCDYCSRAFTRKYNLQTHIENCHLTASCHCEICDQTFGSPAGLQLHLSRGHNRYGQPSPECDICGNIFTRKQNIISHMITVHLQGIGQGIRCELCDKVFTTEWNLKRHMNQFHNPDIQHPTCNDCNKVFKGKHSLIAHIQAMHNVSEKGIIKCHLCEKVYTNNRNLKRHIEMYHGERGEFRCDVCPKVYTSNQSLRRHTRTRHYTTDNEEYMCECCNKTICGIDNFNSHTSFFHKQDSNSVDFSDVVSSKTHEYICVSCSKPFEDEPRLRQHVKNEHSFKTFYSYCRKSLLKQIGLPKNQKLVFYNCEYCKNSFGSVYEFKDHMRINHDREYSLSTCNVCFNKFYSKESMIKHKKICLPPPNVNPCSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNIEDSMESNSYKCKHCDRIYYSDRSLKHHIKLKHTTDEAMECEYCGKICSNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSASFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSKEALTIHLQTKHLAEDEIYKCEVCNLVFKGQEKFEQHNDLCHVNVVPDVKQKILPRCIICMKDFSTRKTLKRHIKKFHDEFDVDELATFGSRRRIFNVECEECVKKFNDDFHFNLYQKLKHLKESVIFKCEACLTSYNSLEFLIQRYKLSNSDSGKGKMILSELCTAEMSDEESSYTGFGSLHEMMEPESTTSDIKIEPMDEETNIKMEPMSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01279494;
- 90% Identity
- iTF_00076806; iTF_00074732; iTF_00074757; iTF_01281532;
- 80% Identity
- -