Basic Information

Insect: Pseudomyrmex concolor
Gene Symbol: znf423
Assembly: GCA_014839585.1
Location: QVOB01003357.1:8057-12403[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00018 0.021 15.7 0.2 1 23 10 32 10 32 0.99

2 18 0.0013 0.15 13.0 3.1 1 23 191 214 191 214 0.97

3 18 0.036 4 8.5 0.1 2 23 226 248 225 248 0.89

4 18 0.34 38 5.4 0.1 3 23 315 335 314 335 0.97

5 18 0.00089 0.1 13.5 0.1 1 23 350 372 350 372 0.97

6 18 0.0046 0.52 11.3 0.2 1 23 381 404 381 404 0.92

7 18 3 3.4e+02 2.4 0.2 1 23 409 432 409 432 0.91

8 18 0.73 83 4.3 2.1 2 23 510 531 510 531 0.96

9 18 0.013 1.4 9.9 0.1 1 23 536 559 536 560 0.93

10 18 2.7 3.1e+02 2.5 0.1 2 23 627 650 626 650 0.81

11 18 2.8e-05 0.0031 18.2 1.0 2 23 666 688 665 688 0.96

12 18 0.023 2.6 9.0 0.9 1 23 697 720 697 720 0.93

13 18 0.91 1e+02 4.0 1.4 2 23 728 749 728 749 0.96

14 18 0.009 1 10.3 0.0 2 23 910 932 909 932 0.92

15 18 0.077 8.7 7.4 0.2 1 23 943 966 943 966 0.94

16 18 0.85 96 4.1 0.1 2 23 979 1000 978 1000 0.94

17 18 0.01 1.2 10.2 0.1 2 23 1009 1031 1008 1031 0.94

18 18 0.086 9.8 7.3 3.0 1 23 1038 1061 1038 1061 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00018	0.021	15.7	0.2	1	23	10	32	10	32	0.99
2	18	0.0013	0.15	13.0	3.1	1	23	191	214	191	214	0.97
3	18	0.036	4	8.5	0.1	2	23	226	248	225	248	0.89
4	18	0.34	38	5.4	0.1	3	23	315	335	314	335	0.97
5	18	0.00089	0.1	13.5	0.1	1	23	350	372	350	372	0.97
6	18	0.0046	0.52	11.3	0.2	1	23	381	404	381	404	0.92
7	18	3	3.4e+02	2.4	0.2	1	23	409	432	409	432	0.91
8	18	0.73	83	4.3	2.1	2	23	510	531	510	531	0.96
9	18	0.013	1.4	9.9	0.1	1	23	536	559	536	560	0.93
10	18	2.7	3.1e+02	2.5	0.1	2	23	627	650	626	650	0.81
11	18	2.8e-05	0.0031	18.2	1.0	2	23	666	688	665	688	0.96
12	18	0.023	2.6	9.0	0.9	1	23	697	720	697	720	0.93
13	18	0.91	1e+02	4.0	1.4	2	23	728	749	728	749	0.96
14	18	0.009	1	10.3	0.0	2	23	910	932	909	932	0.92
15	18	0.077	8.7	7.4	0.2	1	23	943	966	943	966	0.94
16	18	0.85	96	4.1	0.1	2	23	979	1000	978	1000	0.94
17	18	0.01	1.2	10.2	0.1	2	23	1009	1031	1008	1031	0.94
18	18	0.086	9.8	7.3	3.0	1	23	1038	1061	1038	1061	0.97

Sequence Information

Coding Sequence: ATGAAGACCCACGACACTCAGAAACCTTACCAGTGCACAGCCTGTTCGAGAGGCTACAACACAGCCGCGGCCTTGACGTCGCACATGCAATCCCACAAGAAGCATCATCAGTCATCCTCCCAGTCGACCGGCAAGCTTCAGGACGTCGACTACGGCAGAAGAAGCGTGTCCTCGCACAGCACGTCGTCGCCACCGATACCATCGTCGCCGTCGCCATCGCTGAATCTCAGTCTGAACACGAGGAACGTTCTGAAGACGTCGAGCAGTGCCTCCACCACGCCCGTTCTCAGCTCGCCGCTAAAGCTCGCTTGCATGTACTGCACGCGAGACTCGTTCAGTTGCATGCAACAGCTGCAGATGCACGTGCACACGATGCACCAAGCGATTCTGAGCGGCGCGGAAGATTTGGCGCGACCGCCGTCGCCGAGCAGACCGCCGAGCGAGCAACGGACAACCGTCTGTAAACCGTTGGAACGCCAAGACAGTTCGAAGAGCTCGCGTTCGGACCGAAAGTATCCGGTTGAGGATCGGAACGAGAGACCCAGCGAACGAGATCACTATGAAAACGCTTTTACTTGCAATCAGTGCACCATGAAGTTCTCCACGCTGGCTTGTCTGCGCGATCATTTGCTGTCGACTCACCGACACGACACCGTTTACGGCGCGGCGATCATGATGTGCCCGCTGTGCGGTATCCCATGTCCCACGCCGACCAATTACGCCGAGCACTACGTTCTTCAGCACTGCGAGAATCGTCGCCCTGCACCGCCTACCGCCATGGATTACGGGGAAACGAAGCTAAACGGCGTTTACGACAGTACGACGAGAGACTCCAGAGTGTCGCGAAGTAGAGACGCGCCGGAAGCCGCGGATCTCACAAATAAGCACACGACTAGACCTATTTCGGATACTGCTGGTGGATACACCGCTGGTACTCTGCTGTGTGGCCAATGCGGCGCTGCCTTGAAGGACTTCGAATCATTTCGCGAGCACGTAGCGCGTCACTTGCAGGCTGATCAACGTAGTCAGGAAGTATCCAACCGGCAACATCCGTGTCCCAAGTGCGAAGCCGTCTTTCCGAATCGCGAGGACATGCTGGCTCACCTGACCAAACACTATCTGGGCCAGCTCAGCAAGGAGTACGCGTGCGGCGCGTGCAAGAAGCTCTATCCGCATCCGGATCAGCTTCAAAGGCATCTGTTAGATGTGCACGCACATCATTTATATCGTTGCGCGCTTTGCCGGGACACTTTCGACTCTCGAGTAGCGATACAGGTGCACTTCGCGGTGAAGCATAGCCAGGAGTGTCGGATCTATCGGTGCAGTGCATGTGCTTTGTCAAATAATGAAAATTCGCCACCTGGAACGAACTCGGCGGCTGGCGACGATAGAAGCTACTTCAGGAGCGAGGCCGAGATGGCCGCGCATGTGCGCAGCGTGCACGCACCTCCGCTCACTGCGTCTCTGATGAGCAACAGTCCAGTAGGAGCTGCGAGGAGCCCGGCTTCAACGCCCGGTGGTGTTCCACGCTGCGTCTTCTGCGGAATCTGCTGCAACTCGGATCTAGAGCTTCAGCTTCACCTGGCCAGTCACTCAACGAATCTCTACAGATGTCCTATCTGCAGGGAGGGTTTCGCGGTGGAGTTCCTGCTGGACCGGCACGTTGCTCAGGCTCATCACACGACGACTCAGGAACACCAAGTGTCATCTGTCAGAAATAGTTCAAGGGAAAACGGTCGAGTTCATCGACCAAGCAGAAATCAGGAAGAAACAAAGTCTTTGAAGAGGGGCCGTTCGCCAGCGTCGAGCAACAACAACTCTCTGAATCAGCGTGACAATAACAACAAACGTCCAGCTTACGGTACTTCCGGCGGTCAACAGTGTGAACTCTGCGAACGTGGCGAGTTCGCGAACGAAGCCGAGCTGCAGGCGCACAAGAAACTCGCGCACACACCCGCGAAATTGTCTAGCAAGAGTCTCTCAGCCCTGAGCATGACGTGTGGCTATTGCGGCGAAGTCTGCCGCTCGCGGAGCGAACTGGAGTCGCACACGAGGATTCAGCACGCGTCCAGCGAAGCTGGCGGACGTCACAAGTGCAACATTTGCGACGAGGTGTGTCCGTCCGGCGCGAGCCTGGCCGAGCACAAATTGCAGAAACATTGCAAGATCCAATTGAGCAACACATGCGTGGTGTGTCGTGGCTGTCTGACCACGGAGAGCCAATTCCTGGACCACGTGCAGAGACACAGCCTAGAGAACGTAGACCCGCAGCAACGACTCGATAATTCTCTGTCTCATTTGCCCGCAGCGTGCGTCGTCTGTCGACAAACGTTGATCAGCGATCTGGAATGCCGTCTGCACGCGAGGCATCATCTGCGAAATTCTTCAGGATCACGCAGCGCCGGTTCCAGCCCGACCAGTCCCGGAAAAGGACAGAGCCAGAGCTGCTGTCTTTGCCTGCGAGATTTCGCGATCGAGGACTTCGTCAGTCTGCCGCCCAATCCCGCCAGTACAAGCGGACAGCCGGTCAGAGTTTGCAAACCCTGTTACATGCGACATTCTCAGGGATTGCCTATTTTAAATTCGACTTATGAGCAACGAGCCAAGTACGAAGTGCCCTGGCTCGCCAAGGACGGTCAGTGGGACGGTTCTAAGGACAAGTGGGAACATGATAGGAGACTTAAGGTAGAAGATCAGTCTAGGAATGAAGGAAATGCAGAAAAGAAACGGTGTGAAGAGTGCGGGGTAAAGTTTGAAGATCCTGAAGAGGCGGAAAAACATAGGATCGCTGAACACGAAAAATCTAACGGTGATGGCTCGAATTCCTACTCTTGTATACAATGTCAGATGTCCTTTCCCACCGAAGCGTTGATTCAGCAGCACGTGAGAAAAGAGCATCTTGAAACGTCCGGAAAATCGACTTTGGAAGCTTTACGATGTCATTTGTGCTTATTCGAAGCCGCCAATCCTATGCAGTTGCAAATTCATTTGATAGAACACACTTTCGCTGGCTGTGCCGCCCTTAGCTGTTACATCTGTCAGTCGCTCTTTACAACTCCCGTTGGCCTTCAAAATCACATGCTGCAGGAACACGGACTGGGCGCTCGACCGTACGATTGCTCCAAGTGCACGCTCAAGTTCTTCTTTAGAGCGGAACTGGATCATCACGTGTTAACTTTCCATCGTCCGGGAGAAGAAACACTTTCGTCGACACTTGAGAACGCTCGCGAGGCGAAAAATTGCGAGCCTGAAGAGCGCAACGGGGTGACGATAAAAAAAGAAGTGATACAAGGTGGCGAAGAAGAGGAGGACGAGGAAGTGAACGTGGATCAAGTGGGGCATGAAGAGCACGAGGAAGTAGGAGCACGGGAAGAGCAGAAGCTGAAGACGGAGGCGGACAACGAGACGACTTCCGGCAAGACGGAGTCGTGA
Protein Sequence: MKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQSSSQSTGKLQDVDYGRRSVSSHSTSSPPIPSSPSPSLNLSLNTRNVLKTSSSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEDLARPPSPSRPPSEQRTTVCKPLERQDSSKSSRSDRKYPVEDRNERPSERDHYENAFTCNQCTMKFSTLACLRDHLLSTHRHDTVYGAAIMMCPLCGIPCPTPTNYAEHYVLQHCENRRPAPPTAMDYGETKLNGVYDSTTRDSRVSRSRDAPEAADLTNKHTTRPISDTAGGYTAGTLLCGQCGAALKDFESFREHVARHLQADQRSQEVSNRQHPCPKCEAVFPNREDMLAHLTKHYLGQLSKEYACGACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSACALSNNENSPPGTNSAAGDDRSYFRSEAEMAAHVRSVHAPPLTASLMSNSPVGAARSPASTPGGVPRCVFCGICCNSDLELQLHLASHSTNLYRCPICREGFAVEFLLDRHVAQAHHTTTQEHQVSSVRNSSRENGRVHRPSRNQEETKSLKRGRSPASSNNNSLNQRDNNNKRPAYGTSGGQQCELCERGEFANEAELQAHKKLAHTPAKLSSKSLSALSMTCGYCGEVCRSRSELESHTRIQHASSEAGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSNTCVVCRGCLTTESQFLDHVQRHSLENVDPQQRLDNSLSHLPAACVVCRQTLISDLECRLHARHHLRNSSGSRSAGSSPTSPGKGQSQSCCLCLRDFAIEDFVSLPPNPASTSGQPVRVCKPCYMRHSQGLPILNSTYEQRAKYEVPWLAKDGQWDGSKDKWEHDRRLKVEDQSRNEGNAEKKRCEECGVKFEDPEEAEKHRIAEHEKSNGDGSNSYSCIQCQMSFPTEALIQQHVRKEHLETSGKSTLEALRCHLCLFEAANPMQLQIHLIEHTFAGCAALSCYICQSLFTTPVGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEETLSSTLENAREAKNCEPEERNGVTIKKEVIQGGEEEEDEEVNVDQVGHEEHEEVGAREEQKLKTEADNETTSGKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_01271422; iTF_01270703; iTF_01270032; iTF_01268476; iTF_01269245; iTF_01267756;
80% Identity: -