Basic Information

Insect: Pseudomyrmex gracilis
Gene Symbol: znf423
Assembly: GCA_002006095.1
Location: NW:18912-94798[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 7.2e-06 0.00043 19.9 1.5 1 23 145 167 145 167 0.98

2 21 0.091 5.4 7.0 4.0 1 23 173 195 173 195 0.98

3 21 1.8e-06 0.00011 21.8 1.6 1 23 201 223 201 223 0.99

4 21 0.00019 0.011 15.4 0.2 1 23 229 251 229 251 0.99

5 21 0.0014 0.082 12.7 3.1 1 23 411 434 411 434 0.97

6 21 0.038 2.2 8.2 0.1 2 23 446 468 445 468 0.89

7 21 0.36 21 5.1 0.1 3 23 535 555 534 555 0.97

8 21 0.00095 0.056 13.2 0.1 1 23 570 592 570 592 0.97

9 21 0.0049 0.29 11.0 0.2 1 23 601 624 601 624 0.92

10 21 3.2 1.9e+02 2.1 0.2 1 23 629 652 629 652 0.91

11 21 0.78 46 4.1 2.1 2 23 730 751 730 751 0.96

12 21 0.024 1.4 8.8 0.1 1 23 756 779 756 780 0.93

13 21 2.9 1.7e+02 2.3 0.1 2 23 847 870 846 870 0.81

14 21 2.9e-05 0.0017 18.0 1.0 2 23 886 908 885 908 0.96

15 21 0.025 1.5 8.8 0.9 1 23 917 940 917 940 0.93

16 21 0.97 57 3.8 1.4 2 23 948 969 948 969 0.96

17 21 0.0095 0.56 10.1 0.0 2 23 1130 1152 1129 1152 0.92

18 21 0.12 6.8 6.7 0.2 1 23 1163 1186 1163 1186 0.94

19 21 0.9 54 3.9 0.1 2 23 1199 1220 1198 1220 0.94

20 21 0.011 0.65 9.9 0.1 2 23 1229 1251 1228 1251 0.94

21 21 0.092 5.4 7.0 3.0 1 23 1258 1281 1258 1281 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	7.2e-06	0.00043	19.9	1.5	1	23	145	167	145	167	0.98
2	21	0.091	5.4	7.0	4.0	1	23	173	195	173	195	0.98
3	21	1.8e-06	0.00011	21.8	1.6	1	23	201	223	201	223	0.99
4	21	0.00019	0.011	15.4	0.2	1	23	229	251	229	251	0.99
5	21	0.0014	0.082	12.7	3.1	1	23	411	434	411	434	0.97
6	21	0.038	2.2	8.2	0.1	2	23	446	468	445	468	0.89
7	21	0.36	21	5.1	0.1	3	23	535	555	534	555	0.97
8	21	0.00095	0.056	13.2	0.1	1	23	570	592	570	592	0.97
9	21	0.0049	0.29	11.0	0.2	1	23	601	624	601	624	0.92
10	21	3.2	1.9e+02	2.1	0.2	1	23	629	652	629	652	0.91
11	21	0.78	46	4.1	2.1	2	23	730	751	730	751	0.96
12	21	0.024	1.4	8.8	0.1	1	23	756	779	756	780	0.93
13	21	2.9	1.7e+02	2.3	0.1	2	23	847	870	846	870	0.81
14	21	2.9e-05	0.0017	18.0	1.0	2	23	886	908	885	908	0.96
15	21	0.025	1.5	8.8	0.9	1	23	917	940	917	940	0.93
16	21	0.97	57	3.8	1.4	2	23	948	969	948	969	0.96
17	21	0.0095	0.56	10.1	0.0	2	23	1130	1152	1129	1152	0.92
18	21	0.12	6.8	6.7	0.2	1	23	1163	1186	1163	1186	0.94
19	21	0.9	54	3.9	0.1	2	23	1199	1220	1198	1220	0.94
20	21	0.011	0.65	9.9	0.1	2	23	1229	1251	1228	1251	0.94
21	21	0.092	5.4	7.0	3.0	1	23	1258	1281	1258	1281	0.97

Sequence Information

Coding Sequence: ATGTCCAGGAGGAAGCAGGCGAAGCCACGATCTCTCAAACGGGACGAAGAGTGGGACGACGGCAACGAGCAGAATGTCCTGGAGGCGGCCGAACAGGATAACGAAACGACGGCGATTAAGCAGGACgatgaggaggaggaggaggaggaggaactGCAGCGGGCGTTCAGCCGTCAGTCAGAAGATTTCTTGCAAGATGGCGGGCCAACTTCCGTCCAGGGTCCTGATTTGGAGAATCAGAACAGCCTCGACAGCGagGCCTTAGGAACCGGAAGTTCCTCGTGGCATAGCGAGGATGGTGGACCGAACTCGCGCCGCGGTGGCGAGACACCGTCTTCCTGCGCGACACCGACGTCAGCGAGTTTCCCGTCGGAACCTGAAGTCGATGCTGACGGCAGTGTCAATCCCGAGACCAACAACCCCGCCGCCCCCTATCCCTGTCAGTTCTGCGACAGAACGTTTCCGCGACTCAGCTATTTGAAGAAGCACGAACAGAGCCACGGCGATCAGATGCCGTACCGATGCAATTGGTGCGCCAGATTGTTCAAGCACAAGCGTAGTCGCGATCGTCACATAAAGCTGCACACCGGGGACAAGAGATATCGTTGCGTACAATGCGAAGCCGCATTTTCCAGAAGTGACCATTTGAAAATTCATATGAAAACGCACGACACCCAGAAACCTTACCAGTGCACAGCCTGTTCGAGAGGCTACAACACAGCCGCGGCCTTGACGTCGCACATGCAATCCCACAAGAAGCATCATCAGTCATCCTCCCAGTCGACCGGCAAGCTTCACGACGTCGACTACGGCAGAAGAAGCGTGTCCTCGCACAGCACGTCGTCGCCACCGATACCATCGTCGCCGTCGCCATCGCTGAATCTCAGTCTGAACACGAGGAACGTTCTGAAGACGTCGCAGAGCAGTGCCTCCACCACGCCCGTTCTCAGCTCGCCGCTAAAGCTCGCTTGCATGTACTGCACGCGGGACTCGTTCAGTTGCATGCAACAGCTGCAGATGCACGTGCACACGATGCACCAGGCGATTCTGAGCGGCGCGGAGGATTTGGCGCGACCGCCGTCACCGAGCAGACCGCCGAGCGAGCAACGGACAACCGTCTGCAAACCGTTGGAACACCAAGACAGTTCGAAGAGCTCGCGTTCGGACCGAAAATATCCGGTCGAAGATCGGAACGAGAGACCCAACGAACGTGATCACTATGAAAACGCGTTTACCTGCAACCAGTGCACCATGAAGTTCTCCACGCTGGCCTGCCTGCGCGATCACTTGCTGTCGACTCACCGACACGACACCGTTTACGGCGCGGCAATCATGATGTGCCCGCTGTGCGGTATTCCATGTCCCACGCCGACCAATTACGCCGAGCACTACGTTCTTCAGCACTGCGAGAACCGTCGACCTGCGCCGCCTACCGTCATGGATTACGGGGAAACGAAGCTGAACGGCGTTTATGACAGTACGGCGAGAGACTCCAGAGTGTCGCGAAGTAGAGACGCGCCGGAAGCGGCGGATCTCACAAATAAGCACGCGACTAGATCTACTTCGGATACTGCCGGTGGATACACCGCTGGTACCCTGCTGTGCGGCCAATGCGGCGCCGCCTTGAAGGACTTTGAATCATTTCGCGAGCACGTAGCGCGTCACTTGCAGGCTGATCAACGTAATCAGGAAGTATCCAACCGGCAACATCCGTGTCCCAAGTGCGAAGCCGTCTTTCCGAATCGCGAGGACATGCTGGCTCATCTGACCAAGCACTACCTGGGCCAGCTCAGCAAGGAGTACGCGTGCGGCGCGTGCAAGAAGCTCTATCCGCATCCGGACCAGCTTCAGAGGCATCTGTTAGATGTGCACGCACATCATTTATACCGTTGCGCGCTTTGCCGGGACACTTTCGACTCTCGAGTGGCGATACAGGTGCACTTCGCGGTGAAGCACAGCCAGGAGTGTCGGATCTATCGGTGCAGTGCGTGTACTTTGTCAAATAATGAAAACTCGCCGCCTGGAACGAACTCGGCGGCTAACGACGATAGGAGCTACTTCAGGAGCGAGGCCGAGATGGCCGCGCACGTGCGCAGCGTGCACGCACCTCCGCTCACCGCGTCCCTGATGAGCAGCAGTCCAGTGGGAGCTGCGAGGAGCCCGGCTTCAACGCCCGGTGGTGTTCCACGCTGCGTCTTCTGCGGAATCTGCTGCAATTCGGATTTAGAGCTTCAGCTTCATCTGGCCAGTCACTCGACAAATCTCTACAGATGTCCTGTCTGCAGAGAGGGCTTTGCGGTGGAGTTTCTGCTGGACCGGCACGTTGCTCAGGCTCATCACGCGACGACTCAGGAACATCAAGTGTCATCCGTCAGAAGTAGTTCAAGGGAGAACGGTCGTGTTCATCGACCGGCCAGAAATCAGGAAGAAACGAAGTCCTTGAAGAGAGGCCGTTCGCCAGCGTCGAGTAACAACAATTCCCTGAATCAGCGTGACAATAACAATAAACGTCCAGCTTACGGTACTTCAGGCGGTCAACAGTGTGAACTCTGCGAACGCGGCGAGTTCGCGAACGAAGCCGAGCTGCAGGCGCACAAGAAACTCGCGCACACACCCGCCAAACTATCTAGCAAGAGTCTATCAGCCCTGAGCATGACGTGTGGTTATTGCGGCGAAGTCTGTCGCTCGCGGAGCGAGTTGGAGTCGCACACGAGGATTCAGCACGCGTCCAGCGAGCCTGGCGGACGTCACAAATGCAACATTTGCGACGAGGTGTGTCCGTCCGGCGCGAGCCTGGCCGAACACAAATTGCAGAAACATTGCAAGATCCAATTGAGCAATACATGCGTTGTGTGTCGTGGCTGTCTGACCACGGAAAGCCAATTCCTGGACCACGTGCAGAGACACAGTCTAGAGAACGTGGATCCGCAGCAACGACTCGATAATTCTCTGTCTCACTTGCCCGCAGCGTGCGTCGTCTGTCGACAAACGTTGATTAGCGATCTGGAATGCCGTCTGCACGCGAGGCATCATCTGCGAAATTCTTCAGGATCACGCAGCGCTGGTTCCAGTCCGACCAGTCCCGGAAAAGGACAGAGTCAGAGCTGCTGTCTTTGCCTGCGAGATTTCGCAATCGAGGACTTCGTCAGTTTGCCGCCCAATCCCGCCAGTACAAGCGGACAGCCGGTCAGAGTTTGCAAACCCTGTTACATGCGACATTCTCAGGGCTTGCCTATTTTAAATTCGACTTATGAGCAACGAGCCAAGTACGAAGTGCCCTGGCTCGCCAAGGACGGTCAGTGGGACGGCTCTAAGGACAAGTGGGAACATGATAGAAGACTTAAGGTAGAAGATCAATCTAGGAATGAAGtaaatgcagaaaaaaaacggtGTGAAGAGTGCGGGGTAAAGTTTGAAGATCCTGAAGAGGCGGAAAAACATAGGATCGCTGAACACGAAAAATCTAACGGTGATGGCTCGAATTCCTACTCTTGTATACAATGTCAGaTGTCCTTTCCCAGCGAAGCGCTGATTCAGCAACACGTGAGGAAAGAGCACCTTGAAACTTCCGGAAAACCGACCTTGGAAGCTTTACGATGTCATTTGTGCTTGTTCGAAGCCGCCAATCCTATGCAGTTGCAGATTCATTTGATAGAACACACTTTCGCTGGCTGTGCCGCCCTTAGTTGTTACATTTGTCAGTCGCTCTTTACAACTCCCGTTGGCCTTCAGAATCACATGCTGCAGGAGCACGGGCTGGGCGCTCGACCGTACGATTGCTCCAAGTGCACGCTCAAGTTCTTCTTTAGAGCGGAGCTGGATCATCACGTGTTAACTTTCCATCGTCCGGGAGAGGAAACACTTTCGTCGCCACCTGAGAACGTTCGCGAGGCGAAAAATTGCGAGCCTGAAGAGCGCAACTGCGACAACGGGGTGACGATAAAGAAAGAAGTGATACAAGGCGGTGAGGAAGAGGAGGACGAGGAAGTGAACGTGGATCAAGTGGGGCATGAAGAGCACGAGGAAGCTAAAACACGAGAAGAGCAGAAGCTGAAGACGGAAGCGGACAACGAGACGACTTCCGGCAAAACGGAGTCGTGA
Protein Sequence: MSRRKQAKPRSLKRDEEWDDGNEQNVLEAAEQDNETTAIKQDDEEEEEEEELQRAFSRQSEDFLQDGGPTSVQGPDLENQNSLDSEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADGSVNPETNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCNWCARLFKHKRSRDRHIKLHTGDKRYRCVQCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQSSSQSTGKLHDVDYGRRSVSSHSTSSPPIPSSPSPSLNLSLNTRNVLKTSQSSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEDLARPPSPSRPPSEQRTTVCKPLEHQDSSKSSRSDRKYPVEDRNERPNERDHYENAFTCNQCTMKFSTLACLRDHLLSTHRHDTVYGAAIMMCPLCGIPCPTPTNYAEHYVLQHCENRRPAPPTVMDYGETKLNGVYDSTARDSRVSRSRDAPEAADLTNKHATRSTSDTAGGYTAGTLLCGQCGAALKDFESFREHVARHLQADQRNQEVSNRQHPCPKCEAVFPNREDMLAHLTKHYLGQLSKEYACGACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSACTLSNNENSPPGTNSAANDDRSYFRSEAEMAAHVRSVHAPPLTASLMSSSPVGAARSPASTPGGVPRCVFCGICCNSDLELQLHLASHSTNLYRCPVCREGFAVEFLLDRHVAQAHHATTQEHQVSSVRSSSRENGRVHRPARNQEETKSLKRGRSPASSNNNSLNQRDNNNKRPAYGTSGGQQCELCERGEFANEAELQAHKKLAHTPAKLSSKSLSALSMTCGYCGEVCRSRSELESHTRIQHASSEPGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSNTCVVCRGCLTTESQFLDHVQRHSLENVDPQQRLDNSLSHLPAACVVCRQTLISDLECRLHARHHLRNSSGSRSAGSSPTSPGKGQSQSCCLCLRDFAIEDFVSLPPNPASTSGQPVRVCKPCYMRHSQGLPILNSTYEQRAKYEVPWLAKDGQWDGSKDKWEHDRRLKVEDQSRNEVNAEKKRCEECGVKFEDPEEAEKHRIAEHEKSNGDGSNSYSCIQCQMSFPSEALIQQHVRKEHLETSGKPTLEALRCHLCLFEAANPMQLQIHLIEHTFAGCAALSCYICQSLFTTPVGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEETLSSPPENVREAKNCEPEERNCDNGVTIKKEVIQGGEEEEDEEVNVDQVGHEEHEEAKTREEQKLKTEADNETTSGKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_01267069;
80% Identity: -