Basic Information

Insect: Pseudomyrmex cubaensis
Gene Symbol: znf423
Assembly: GCA_014825685.1
Location: QVOA01012643.1:10286-26411[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 8.4e-06 0.00091 19.9 1.5 1 23 94 116 94 116 0.98

2 21 0.11 11 7.0 4.0 1 23 122 144 122 144 0.98

3 21 2.1e-06 0.00023 21.8 1.6 1 23 150 172 150 172 0.99

4 21 0.00022 0.024 15.5 0.2 1 23 178 200 178 200 0.99

5 21 0.004 0.44 11.5 2.8 1 23 362 385 362 385 0.97

6 21 0.044 4.8 8.2 0.1 2 23 397 419 396 419 0.89

7 21 0.41 45 5.2 0.1 3 23 486 506 485 506 0.97

8 21 0.0011 0.12 13.3 0.1 1 23 521 543 521 543 0.97

9 21 0.0056 0.61 11.0 0.2 1 23 552 575 552 575 0.92

10 21 3.7 4.1e+02 2.2 0.2 1 23 580 603 580 603 0.91

11 21 0.9 98 4.1 2.1 2 23 681 702 681 702 0.96

12 21 0.028 3.1 8.9 0.1 1 23 707 730 707 731 0.93

13 21 3.3 3.6e+02 2.3 0.1 2 23 798 821 797 821 0.81

14 21 3.4e-05 0.0037 18.0 1.0 2 23 837 859 836 859 0.96

15 21 0.029 3.1 8.8 0.9 1 23 868 891 868 891 0.93

16 21 1.1 1.2e+02 3.8 1.4 2 23 899 920 899 920 0.96

17 21 0.011 1.2 10.1 0.0 2 23 1081 1103 1080 1103 0.92

18 21 0.094 10 7.2 0.2 1 23 1114 1137 1114 1137 0.94

19 21 1 1.1e+02 3.9 0.1 2 23 1150 1171 1149 1171 0.94

20 21 0.013 1.4 9.9 0.1 2 23 1180 1202 1179 1202 0.94

21 21 0.11 12 7.0 3.0 1 23 1209 1232 1209 1232 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	8.4e-06	0.00091	19.9	1.5	1	23	94	116	94	116	0.98
2	21	0.11	11	7.0	4.0	1	23	122	144	122	144	0.98
3	21	2.1e-06	0.00023	21.8	1.6	1	23	150	172	150	172	0.99
4	21	0.00022	0.024	15.5	0.2	1	23	178	200	178	200	0.99
5	21	0.004	0.44	11.5	2.8	1	23	362	385	362	385	0.97
6	21	0.044	4.8	8.2	0.1	2	23	397	419	396	419	0.89
7	21	0.41	45	5.2	0.1	3	23	486	506	485	506	0.97
8	21	0.0011	0.12	13.3	0.1	1	23	521	543	521	543	0.97
9	21	0.0056	0.61	11.0	0.2	1	23	552	575	552	575	0.92
10	21	3.7	4.1e+02	2.2	0.2	1	23	580	603	580	603	0.91
11	21	0.9	98	4.1	2.1	2	23	681	702	681	702	0.96
12	21	0.028	3.1	8.9	0.1	1	23	707	730	707	731	0.93
13	21	3.3	3.6e+02	2.3	0.1	2	23	798	821	797	821	0.81
14	21	3.4e-05	0.0037	18.0	1.0	2	23	837	859	836	859	0.96
15	21	0.029	3.1	8.8	0.9	1	23	868	891	868	891	0.93
16	21	1.1	1.2e+02	3.8	1.4	2	23	899	920	899	920	0.96
17	21	0.011	1.2	10.1	0.0	2	23	1081	1103	1080	1103	0.92
18	21	0.094	10	7.2	0.2	1	23	1114	1137	1114	1137	0.94
19	21	1	1.1e+02	3.9	0.1	2	23	1150	1171	1149	1171	0.94
20	21	0.013	1.4	9.9	0.1	2	23	1180	1202	1179	1202	0.94
21	21	0.11	12	7.0	3.0	1	23	1209	1232	1209	1232	0.97

Sequence Information

Coding Sequence: ATGCTTTTTAAAGGCAACAGCTCGCGGCTAGAGTTGTTGATAGGAAAAATTCAAGCGCACAAGGAACCGTCACAGGAAGAGCAACGATTTCATAAGTCTAAAGAGGCCTTAGGAACCGGAAGTTCCTCGTGGCACAGCGAGGATGGCGGACCCAACTCGCGTCGAGGTGGCGAGACACCGTCTTCCTGCGCGACACCGACGTCAGCGAGTTTCCCGTCGGAACCTGAGGTCGACGCTGACGGCAGTGTCAACCCCGAGAGCAACAACCCCGCCGCCCCTTATCCCTGTCAGTTCTGCGACAGGACGTTTCCGCGGCTCAGTTATTTGAAGAAGCACGAACAGAGCCACGGCGATCAGATGCCGTACCGATGCAATTGGTGCGCCAGATTGTTCAAGCACAAACGTAGTCGCGATCGTCACATAAAGCTGCACACCGGGGACAAGAGATATCGTTGCGTACAATGCGAGGCCGCATTCTCTAGGAGTGACCACTTGAAGATTCATATGAAGACGCACGACACCCAGAAACCTTACCAGTGCACAGCCTGTTCGAGAGGCTACAACACTGCCGCGGCCTTGACGTCGCACATGCAATCCCACAAGAAGCATCATCAGTCATCCTCCCAGTCGACCGGCAAGCTTCAGGACGTCGACTACGGCAGAAGAAGCGTGTCCTCGCACAGCACGTCGTCGCCACCGATACCATCGTCGCCGTCGCCATCGCTGAATCTTAGTCTGAACACGAGAAACGTTCTGAAGACGTCGCAGAGCAGTGCCTCTACCACGCCCGTTCTCAGCTCGCCGCTGAAGCTCGCTTGCATGTACTGCACGCGGGACTCGTTCAGTTGCATGCAACAGCTGCAGATGCACGTGCACACGATGCACCAGGCGATTCTGAGCGGCGCGGAGGACTTGGCGCGACCGCCGTCACCGAGCAGACCGCCGAGCGAGCAACGGACAACCGTCTGCAAACCGTTGGAGCATCAAGACAGTTCGAAGAGCTCGCGTTCGGACCGAAAGTATCCGGTCGAGGATCGGAATCGGAACGAGAGACCCAGCGAACGAGATCACTATGAAAACGCGTTTACCTGCAACCAGTGCACCATGAAGTTCTCCACGCTGGCCTGCCTGAGCGATCACTTGCTGTCGACTCACCGACACGACACCGTTTACGGCGCGGCGATCATGATGTGCCCGCTGTGCGGTATCCCATGTCCCACGCCGACCAATTACGCCGAGCACTACGTTCTTCAGCACTGCGAGAACCGTCGCCCTGTGCCGCCTACCGCCATGGATTACGGGGAAACAAAGCTGAACGGCGTTTATGACAGTACGGCGAGAGACTCCAGAGTGTCGCGAAGTAGAGACGCGCCGGAAGCGGCGGATCTCACAAATAAGCACGCGACTAGACCTATTTCGGATACTGCCGGTGGATACACCGCTGGTACTCTGCTGTGCGGCCAATGCGGCGCCGCCTTGAAAGACTTTGAATCATTTCGCGAGCACGTAGCGCGTCACTTGCAGGCTGATCAACGTAGTCAGGAAGTATCCAACCGGCAACATCCGTGTCCCAAGTGCGAAGCCGTTTTTCCGAATCGCGAGGACATGCTGGCTCATCTGACCAAGCACTACCTGGGCCAGCTCAGCAAGGAGTACGCGTGCGGCGCGTGCAAGAAGCTCTATCCGCATCCGGACCAGCTTCAGAGGCATCTGTTAGATGTGCACGCACATCATTTATATCGTTGCGCGCTTTGCCGGGACACTTTCGACTCTCGAGTGGCGATACAGGTGCACTTCGCGGTGAAGCACAGCCAGGAGTGTCGGATCTATCGGTGCAGTGCATGTGCTTTGTCAAATAATGAAAACTCGCCGCCCGGAACGAACTCGGCGGTTAGCGACGACAGGAGCTACTTCAGGAGCGAGGCCGAGATGGCCGCGCACGTGCGCAGCGTGCACGCACCTCCGCTCACTGCGTCCCTGATGAGCAGCAGTCCAGTGGGAGCTGTGAGAAGCCCGGCTTCAACGCCCGGTGGTGTTCCACGCTGCGTCTTTTGCGGAATCTGCTGCAACTCGGATCTAGAGCTTCAGCTTCACCTGGCCAGTCACTCGACGAATCTCTACAGATGTCCTGTCTGCAGGGAGGGCTTTGCGGTGGAGTTCCTGCTGGACCGGCACGTTGCTCAGGCTCATCACGCGACGACTCAGGAACATCAAGTGTCATCCGTCAGAAGCAGTTCAAGGGAAAACGGTCGAGTTCATCGACCGAGCAGAAATCAAGAAGAAACAAAGTCCTTGAAGAGGGGCCGTTCGCCAGCGTCGAGCAACAACAACTCTTTGAATCAGCGTGACAATAACAACAAACGTCCAGCTTACGGTACTTCCGGCAGTCAACAGTGTGAACTCTGCGAACGCGGCGAGTTCGCGAACGAAGCCGAGCTCCAGGCGCACAAGAAACTCGCGCACACACCCGCCAAATTGTCTAGCAAAAGTCTCTCAGCCCTGAGCATGACGTGTGGCTATTGCGGCGAAGTCTGCCGCTCGCGGAGCGAGCTGGAGTCGCACACGAGGATTCAGCACGCGTCCAGCGAGCCTGGCGGACGTCACAAGTGCAACATTTGCGACGAGGTGTGTCCGTCCGGCGCGAGCCTGGCCGAGCACAAATTGCAGAAACATTGCAAGATCCAATTGAGCAACACATGCGTGGTGTGTCGTGGCTGTCTGACCACGGAGAGCCAATTTCTGGACCACGTGCAGAGACACAGCCTAGAGAACGTGGACCCGCAGCAACGACTCGATAATTCTCTGTCTCATTTGCCAGCAGCGTGCGTCGTCTGTCGACAAACGTTGATCAGCGATCTGGAATGTCGTCTGCACGCGAGGCATCATTTGCGAAATTCTTCAGGATCGCGCAGCGCCGGTTCCAGCCCGACCAGTCCCGGAAAAGGACAGAGCCAGAGCTGCTGTCTTTGCCTGCGAGATTTCGCGATTGAGGATTTCGTCAGTTTGCCGCCCAATCCCGCCAGTACAAGCGGACAGCCGGTCAGAGTTTGCAAACCCTGTTACATGCGACATTCTCAGGGATTGCCTATTTTAAATTCGACTTATGAGCAGCGAGCCAAGTACGAAGTGCCCTGGCTCGCCAAGGACGGTCAGTGGGACGGCTCTAAAGACAAGTGGGAACATGATAGAAGACTTAAGGTAGAAGATCAGTCTAGAAATGAAGGAAATGCAGAAAAGAAACGGTGTGAAGAGTGCGGGGTAAAGTTTGAAGATCCTGAAGAGGCGGAAAAACATAGGATCGCTGAACACGAAAAATCTAACGGTGATGGCTCGAATTCCTACTCTTGTATACAATGTCAGATGTCCTTTCCCACCGAAGCGCTGATTCAGCAACACGTGAGGAAAGATCACCTTGAAACGTCCGGAAAATCGACTTTGGAAGCTTTACGATGTCATTTGTGCTTGTTCGAAGCCGCCAATCCTATGCAGTTGCAGATTCATTTGATAGAACACACTTTCGCCGGCTGTGCCGCCCTTAGCTGTTACATTTGTCAGTCGCTCTTTACAACTCCCGTTGGCCTTCAGAATCACATGCTGCAGGAGCACGGGCTGGGCGCTCGACCGTACGATTGCTCCAAGTGCACGCTCAAGTTCTTCTTTAGAGCGGAGCTGGATCATCACGTGTTAACTTTCCATCGTCCGGGAGAGGAAACACTTTCGTCGACACCTGAGAACGCTCGCGAGGCGAAAAATTGCGAGCCTGAAGAGCGCAACTGCGACAACGGGGTGACGATAAAAAAAGAAGTGATACAAAGCGGCGAGGAAGAGGAGGACGAGGAAGTGAACGTGGATCAAGTGGGGCATGAAGAGCACGAGGAAGCTGGAGCACGGGAAGAGCAGAAGCTGAAGACGGAAGCGGAGACGACTTCCGGCAAGACGGAGTCGTGA
Protein Sequence: MLFKGNSSRLELLIGKIQAHKEPSQEEQRFHKSKEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADGSVNPESNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCNWCARLFKHKRSRDRHIKLHTGDKRYRCVQCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQSSSQSTGKLQDVDYGRRSVSSHSTSSPPIPSSPSPSLNLSLNTRNVLKTSQSSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEDLARPPSPSRPPSEQRTTVCKPLEHQDSSKSSRSDRKYPVEDRNRNERPSERDHYENAFTCNQCTMKFSTLACLSDHLLSTHRHDTVYGAAIMMCPLCGIPCPTPTNYAEHYVLQHCENRRPVPPTAMDYGETKLNGVYDSTARDSRVSRSRDAPEAADLTNKHATRPISDTAGGYTAGTLLCGQCGAALKDFESFREHVARHLQADQRSQEVSNRQHPCPKCEAVFPNREDMLAHLTKHYLGQLSKEYACGACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSACALSNNENSPPGTNSAVSDDRSYFRSEAEMAAHVRSVHAPPLTASLMSSSPVGAVRSPASTPGGVPRCVFCGICCNSDLELQLHLASHSTNLYRCPVCREGFAVEFLLDRHVAQAHHATTQEHQVSSVRSSSRENGRVHRPSRNQEETKSLKRGRSPASSNNNSLNQRDNNNKRPAYGTSGSQQCELCERGEFANEAELQAHKKLAHTPAKLSSKSLSALSMTCGYCGEVCRSRSELESHTRIQHASSEPGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSNTCVVCRGCLTTESQFLDHVQRHSLENVDPQQRLDNSLSHLPAACVVCRQTLISDLECRLHARHHLRNSSGSRSAGSSPTSPGKGQSQSCCLCLRDFAIEDFVSLPPNPASTSGQPVRVCKPCYMRHSQGLPILNSTYEQRAKYEVPWLAKDGQWDGSKDKWEHDRRLKVEDQSRNEGNAEKKRCEECGVKFEDPEEAEKHRIAEHEKSNGDGSNSYSCIQCQMSFPTEALIQQHVRKDHLETSGKSTLEALRCHLCLFEAANPMQLQIHLIEHTFAGCAALSCYICQSLFTTPVGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEETLSSTPENAREAKNCEPEERNCDNGVTIKKEVIQSGEEEEDEEVNVDQVGHEEHEEAGAREEQKLKTEAETTSGKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_01267069;
80% Identity: -