Basic Information

Insect: Pseudomyrmex dendroicus
Gene Symbol: znf423
Assembly: GCA_014825645.1
Location: QVNZ01020440.1:42810-58886[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 8.5e-06 0.00099 20.0 1.5 1 23 94 116 94 116 0.98

2 21 0.11 13 7.0 4.0 1 23 122 144 122 144 0.98

3 21 2.1e-06 0.00025 21.9 1.6 1 23 150 172 150 172 0.99

4 21 0.00023 0.026 15.5 0.2 1 23 178 200 178 200 0.99

5 21 0.0041 0.48 11.5 2.8 1 23 362 385 362 385 0.97

6 21 0.044 5.2 8.3 0.1 2 23 397 419 396 419 0.89

7 21 0.42 49 5.2 0.1 3 23 483 503 482 503 0.97

8 21 0.0011 0.13 13.3 0.1 1 23 518 540 518 540 0.97

9 21 0.0057 0.67 11.0 0.2 1 23 549 572 549 572 0.92

10 21 3.8 4.4e+02 2.2 0.2 1 23 577 600 577 600 0.91

11 21 0.91 1.1e+02 4.1 2.1 2 23 678 699 678 699 0.96

12 21 0.028 3.3 8.9 0.1 1 23 704 727 704 728 0.93

13 21 3.4 3.9e+02 2.3 0.1 2 23 795 818 794 818 0.81

14 21 8.4e-05 0.0098 16.8 0.8 2 23 834 856 833 856 0.96

15 21 0.029 3.4 8.8 0.9 1 23 865 888 865 888 0.93

16 21 1.1 1.3e+02 3.8 1.4 2 23 896 917 896 917 0.96

17 21 0.032 3.7 8.7 0.1 2 23 1078 1100 1077 1100 0.92

18 21 0.096 11 7.2 0.2 1 23 1111 1134 1111 1134 0.94

19 21 1.1 1.2e+02 3.9 0.1 2 23 1147 1168 1146 1168 0.94

20 21 0.013 1.5 9.9 0.1 2 23 1177 1199 1176 1199 0.94

21 21 0.11 13 7.0 3.0 1 23 1206 1229 1206 1229 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	8.5e-06	0.00099	20.0	1.5	1	23	94	116	94	116	0.98
2	21	0.11	13	7.0	4.0	1	23	122	144	122	144	0.98
3	21	2.1e-06	0.00025	21.9	1.6	1	23	150	172	150	172	0.99
4	21	0.00023	0.026	15.5	0.2	1	23	178	200	178	200	0.99
5	21	0.0041	0.48	11.5	2.8	1	23	362	385	362	385	0.97
6	21	0.044	5.2	8.3	0.1	2	23	397	419	396	419	0.89
7	21	0.42	49	5.2	0.1	3	23	483	503	482	503	0.97
8	21	0.0011	0.13	13.3	0.1	1	23	518	540	518	540	0.97
9	21	0.0057	0.67	11.0	0.2	1	23	549	572	549	572	0.92
10	21	3.8	4.4e+02	2.2	0.2	1	23	577	600	577	600	0.91
11	21	0.91	1.1e+02	4.1	2.1	2	23	678	699	678	699	0.96
12	21	0.028	3.3	8.9	0.1	1	23	704	727	704	728	0.93
13	21	3.4	3.9e+02	2.3	0.1	2	23	795	818	794	818	0.81
14	21	8.4e-05	0.0098	16.8	0.8	2	23	834	856	833	856	0.96
15	21	0.029	3.4	8.8	0.9	1	23	865	888	865	888	0.93
16	21	1.1	1.3e+02	3.8	1.4	2	23	896	917	896	917	0.96
17	21	0.032	3.7	8.7	0.1	2	23	1078	1100	1077	1100	0.92
18	21	0.096	11	7.2	0.2	1	23	1111	1134	1111	1134	0.94
19	21	1.1	1.2e+02	3.9	0.1	2	23	1147	1168	1146	1168	0.94
20	21	0.013	1.5	9.9	0.1	2	23	1177	1199	1176	1199	0.94
21	21	0.11	13	7.0	3.0	1	23	1206	1229	1206	1229	0.97

Sequence Information

Coding Sequence: ATGCTTTTTAAAGGCAACAGCTCGCGGCTGGAGTTGTTGATAGGAAAAATTCAAGCGCACAAGGAACCGTCACAGGAAGAGCAACGATTTCACAAGTCTAAAGAGGCCTTAGGAACCGGAAGTTCCTCGTGGCACAGCGAGGATGGCGGACCCAACTCGCGTCGCGGTGGCGAGACACCGTCTTCCTGCGCGACACCGACGTCAGCGAGTTTCCCGTCGGAACCTGAGGTCGACGCTGACGGCAATGTCAACCCCGAGAGCAACAACCCCGCCGCCCCTTATCCCTGTCAGTTCTGCGACAGGACGTTTCCGCGGCTCAGTTATTTGAAGAAGCACGAACAGAGCCACGGCGATCAGATGCCGTACCGATGCAATTGGTGCGCCAGATTGTTCAAGCACAAACGTAGTCGCGATCGTCACATAAAGCTGCACACCGGGGACAAGAGATATCGTTGCGTACAATGCGAGGCCGCATTCTCTAGGAGTGACCACTTGAAGATTCATATGAAGACGCACGACACCCAGAAACCTTACCAGTGCACAGCCTGTTCGAGAGGCTACAACACAGCCGCGGCCTTGACGTCGCACATGCAATCCCACAAGAAGCATCATCAGTCATCCTCCCAGTCGACCGGCAAGCTTCAGGACGTCGACTACGGCAGAAGAAGCGTGTCCTCGCACAGCACGTCGTCGCCACCGATACCATCGTCGCCGTCGCCATCGCTGAATCTCAGTCTGAACACGAGAAACGTTCTGAAGACGTCGCAGAGCAGTGCCTCCACCACGCCCGTTCTCAGCTCGCCGCTGAAGCTCGCTTGCATGTACTGCACGCGGGACTCGTTCAGTTGCATGCAACAGCTGCAGATGCACGTGCACACGATGCACCAGGCGATTCTGAGCGGCGCGGAGGACTTGGCGCGACCGCCGTCACCGAGCAGACCGCCGAGCGAGCAACGGACAACCGTCTGCAAACCGTTGGAGCACCAAGACAGTTCGAAGAGCTCGCGTTCGGACCGAAAGTATCCGGTCGAGGATCGGAATCGGAACGAGAGACCCAGCGAACGAGATCACTATGAAAACGCGTTTACCTGCAACCAGTGCACCATGAAGTTCTCCACGCTGGCCTGCCTGAGCGATCACTTGCTGTCGACTCACCGACACGACACCGTTTACGGCGCGGCGATCATGATGTGCCCGCTGTGCGGTATCCCATGCCCCACGCCGACCAATTACGCCGAGCACTACGTTCTTCAGCACTGCGAGAACCGTCGCCCTGTGCCGCCTACCGCCATGGATTACGGGGAAACGAAGCTGAACGGCGTTTATGACAGTACGGCGAGAGACTCCAGAGTGTCGCGAAGTAGAGACGCGGCGGATCTCACAAATAAGCACGCGACTAGACCTATTTCGGATACTGCCGGTGGATACACCGCTGGTACTCTGCTGTGCGGCCAATGCGGCGCCGCCTTGAAAGACTTTGAATCATTTCGCGAGCACGTAGCGCGTCACTTGCAGGCTGATCAACGTAGTCAGGAAGTATCCAACCGGCAACATCCGTGTCCCAAGTGCGAAGCCGTCTTTCCGAATCGCGAGGACATGCTGGCTCACCTGACCAAGCACTACCTAGGCCAACTCAGCAAGGAGTACGCGTGCGGCGCGTGCAAGAAGCTCTATCCGCATCCGGACCAGCTTCAGAGGCATCTGTTAGATGTGCACGCACATCATTTATATCGTTGCGCGCTTTGCCGGGACACTTTCGACTCTCGAGTGGCGATACAGGTGCACTTCGCGGTGAAACACAGCCAGGAGTGTCGGATCTATCGGTGCAGTGCATGTGCTTTGTCAAATAATGAAAACTCGCCGCCCGGAACGAACTCGGCGGTTAGCGACGACAGGAGCTACTTCAGGAGCGAGGCCGAGATGGCCGCGCACGTGCGCAGCGTGCACGCACCTCCGCTCACTGCGTCCCTGATGAGCAGCAGTCCAGTGGGAGCTGCGAGAAGCCCGGCTTCAACGCCCGGTGGTGTTCCACGCTGCGTCTTTTGCGGAATCTGCTGCAACTCGGATCTAGAGCTTCAGCTTCACCTGGCCAGTCACTCGACGAATCTCTACAGATGTCCTGTCTGCAGGGAGGGCTTTGCGGTGGAGTTCCTGCTGGATCGGCACGTCGCCCAGGCTCATCACGCGACAACTCAGGAACATCAAGTGTCATCCGTCAGAAGCAGTTCAAGGGAGAACGGTCGAGTTCATCGACCGAGCAGAAATCAAGAAGAAACAAAGTCCTTGAAGAGGGGCCGTTCGCCAGCGTCGAGCAACAACAACTCTCTGAATCAGCGTGACAATAACAACAAACGTCCAGCTTACGGTACTTCCGGCGGTCAACAGTGTGAACTCTGCGAACGCGGCGAGTTCGCGAACGAAGCCGAGCTCCAGGCGCACAAGAAACTCGCGCACACACCCGCCAAATTGTCTAGCAAGAGTCTCTCAGCCCTGAGCGTGACGTGTGGCTATTGCGGCGAAATCTGCCGCTCGCGGAGCGAGCTGGAGTCGCACACGAGGATTCAGCACGCGTCCAGCGAGCCTGGCGGACGTCACAAGTGCAACATTTGCGACGAGGTGTGTCCGTCCGGCGCGAGCCTAGCCGAGCACAAATTGCAGAAACATTGCAAGATCCAATTGAGCAACACATGCGTGGTGTGTCGTGGCTGTCTGACCACGGAGAGCCAATTTCTGGACCACGTGCAGAGACACAGCTTAGAGAACGTGGACCCGCAGCAACGACTCGATAATTCTCTGTCCCATTTGCCCGCAGCGTGCGTCGTCTGTCGACAAACGTTGATCAGCGATCTGGAATGTCGTCTGCACGCGAGGCATCATTTGCGAAATTCTTCAGGATCGCGCAGCACCGGTTCCAGCCCGACCAGTCCCGGAAAAGGACAGAGCCAGAGCTGCTGTCTTTGCCTGCGAGATTTCGCGATCGAGGACTTTGTCAGTTTGCCGCCCAATCCCGCCAGTACAAGCGGACAACCGGTCAGAGTTTGCAAACCTTGTTACATGCGACATTCTCAGGGATTGCCTATTTTAAATTCGACTTATGAGCAGCGAGCCAAGTACGAAGTGCCCTGGCTCGCCAAGGACGGTCAGTGGGACGGCTCTAAAGACAAGTGGGAACATGATAGAAGACTTAAGATAGAAGATCAGTCTAGAAATGAAGGAAATGCAGAAAAGAAACGGTGTGAAGAGTGCGGGGTAAAGTTTGAAGATCTTGAAGAGGCGGAAAAACATAGGATCGCTGAACACGAAAAATCTAACGGTGATGGCTCGAATTCCTACTCTTGTATACAATGTCAGATGTCCTTTCCCACCGAAGCGCTGATTCAGCAGCACGTGAGGAAAGATCACCTTGAAACGTCCGGAAAATCGACTTTGGAAGCTTTACGATGTCATTTGTGCTTATTCGAAGCCGCCAATCCTATGCAGTTGCAGATTCATCTGATAGAACACACTTTCGCTGGCTGTGCCGCTCTTAGCTGTTACATTTGTCAGTCGCTCTTCACAACTCCCGTTGGCCTTCAGAATCACATGCTGCAGGAGCACGGACTGGGCGCTCGACCGTACGATTGCTCCAAGTGCACGCTCAAGTTCTTTTTTAGAGCGGAGCTGGATCATCACGTGTTAACTTTCCATCGTCCGGGAGAGGAAACACTTTCGTCGACACCTGAGAACGCTCGCGAGGCGAAAAATTGCGAGTCTGAAGAGCGCAATTGCGACAACGGGGTGACGATAAAAAAAGAAGTAATACAAAGCGGCGAGAAAGAGGAGGACGAGGAAGTAAACGTGGATCAAGTGGGGCATGAAGAGCACGAGGAAGCTGGAGCACGGGAAGAGCAGAAGCTGAAGACGGAAGCGGAGACGACTTCCGGCAAGACGGAGTCGTGA
Protein Sequence: MLFKGNSSRLELLIGKIQAHKEPSQEEQRFHKSKEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADGNVNPESNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCNWCARLFKHKRSRDRHIKLHTGDKRYRCVQCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQSSSQSTGKLQDVDYGRRSVSSHSTSSPPIPSSPSPSLNLSLNTRNVLKTSQSSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEDLARPPSPSRPPSEQRTTVCKPLEHQDSSKSSRSDRKYPVEDRNRNERPSERDHYENAFTCNQCTMKFSTLACLSDHLLSTHRHDTVYGAAIMMCPLCGIPCPTPTNYAEHYVLQHCENRRPVPPTAMDYGETKLNGVYDSTARDSRVSRSRDAADLTNKHATRPISDTAGGYTAGTLLCGQCGAALKDFESFREHVARHLQADQRSQEVSNRQHPCPKCEAVFPNREDMLAHLTKHYLGQLSKEYACGACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSACALSNNENSPPGTNSAVSDDRSYFRSEAEMAAHVRSVHAPPLTASLMSSSPVGAARSPASTPGGVPRCVFCGICCNSDLELQLHLASHSTNLYRCPVCREGFAVEFLLDRHVAQAHHATTQEHQVSSVRSSSRENGRVHRPSRNQEETKSLKRGRSPASSNNNSLNQRDNNNKRPAYGTSGGQQCELCERGEFANEAELQAHKKLAHTPAKLSSKSLSALSVTCGYCGEICRSRSELESHTRIQHASSEPGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSNTCVVCRGCLTTESQFLDHVQRHSLENVDPQQRLDNSLSHLPAACVVCRQTLISDLECRLHARHHLRNSSGSRSTGSSPTSPGKGQSQSCCLCLRDFAIEDFVSLPPNPASTSGQPVRVCKPCYMRHSQGLPILNSTYEQRAKYEVPWLAKDGQWDGSKDKWEHDRRLKIEDQSRNEGNAEKKRCEECGVKFEDLEEAEKHRIAEHEKSNGDGSNSYSCIQCQMSFPTEALIQQHVRKDHLETSGKSTLEALRCHLCLFEAANPMQLQIHLIEHTFAGCAALSCYICQSLFTTPVGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEETLSSTPENAREAKNCESEERNCDNGVTIKKEVIQSGEKEEDEEVNVDQVGHEEHEEAGAREEQKLKTEAETTSGKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_01267069;
80% Identity: -