Basic Information

Insect: Pseudomyrmex pallidus
Gene Symbol: znf423
Assembly: GCA_014825455.1
Location: QVNV01010931.1:2127-14424[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 8.6e-06 0.00083 19.9 1.5 1 23 95 117 95 117 0.98

2 21 0.11 11 7.0 4.0 1 23 123 145 123 145 0.98

3 21 2.1e-06 0.00021 21.8 1.6 1 23 151 173 151 173 0.99

4 21 0.00023 0.022 15.5 0.2 1 23 179 201 179 201 0.99

5 21 0.0016 0.16 12.8 3.1 1 23 361 384 361 384 0.97

6 21 0.045 4.4 8.2 0.1 2 23 396 418 395 418 0.89

7 21 0.42 41 5.2 0.1 3 23 485 505 484 505 0.97

8 21 0.0011 0.11 13.3 0.1 1 23 520 542 520 542 0.97

9 21 0.0058 0.56 11.0 0.2 1 23 551 574 551 574 0.92

10 21 3.8 3.7e+02 2.2 0.2 1 23 579 602 579 602 0.91

11 21 0.92 90 4.1 2.1 2 23 680 701 680 701 0.96

12 21 0.029 2.8 8.9 0.1 1 23 706 729 706 730 0.93

13 21 3.4 3.3e+02 2.3 0.1 2 23 797 820 796 820 0.81

14 21 3.5e-05 0.0034 18.0 1.0 2 23 836 858 835 858 0.96

15 21 0.029 2.9 8.8 0.9 1 23 867 890 867 890 0.93

16 21 1.1 1.1e+02 3.8 1.4 2 23 898 919 898 919 0.96

17 21 0.011 1.1 10.1 0.0 2 23 1080 1102 1079 1102 0.92

18 21 0.096 9.4 7.2 0.2 1 23 1113 1136 1113 1136 0.94

19 21 1.1 1e+02 3.9 0.1 2 23 1149 1170 1148 1170 0.94

20 21 0.013 1.3 9.9 0.1 2 23 1179 1201 1178 1201 0.94

21 21 0.11 11 7.0 3.0 1 23 1208 1231 1208 1231 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	8.6e-06	0.00083	19.9	1.5	1	23	95	117	95	117	0.98
2	21	0.11	11	7.0	4.0	1	23	123	145	123	145	0.98
3	21	2.1e-06	0.00021	21.8	1.6	1	23	151	173	151	173	0.99
4	21	0.00023	0.022	15.5	0.2	1	23	179	201	179	201	0.99
5	21	0.0016	0.16	12.8	3.1	1	23	361	384	361	384	0.97
6	21	0.045	4.4	8.2	0.1	2	23	396	418	395	418	0.89
7	21	0.42	41	5.2	0.1	3	23	485	505	484	505	0.97
8	21	0.0011	0.11	13.3	0.1	1	23	520	542	520	542	0.97
9	21	0.0058	0.56	11.0	0.2	1	23	551	574	551	574	0.92
10	21	3.8	3.7e+02	2.2	0.2	1	23	579	602	579	602	0.91
11	21	0.92	90	4.1	2.1	2	23	680	701	680	701	0.96
12	21	0.029	2.8	8.9	0.1	1	23	706	729	706	730	0.93
13	21	3.4	3.3e+02	2.3	0.1	2	23	797	820	796	820	0.81
14	21	3.5e-05	0.0034	18.0	1.0	2	23	836	858	835	858	0.96
15	21	0.029	2.9	8.8	0.9	1	23	867	890	867	890	0.93
16	21	1.1	1.1e+02	3.8	1.4	2	23	898	919	898	919	0.96
17	21	0.011	1.1	10.1	0.0	2	23	1080	1102	1079	1102	0.92
18	21	0.096	9.4	7.2	0.2	1	23	1113	1136	1113	1136	0.94
19	21	1.1	1e+02	3.9	0.1	2	23	1149	1170	1148	1170	0.94
20	21	0.013	1.3	9.9	0.1	2	23	1179	1201	1178	1201	0.94
21	21	0.11	11	7.0	3.0	1	23	1208	1231	1208	1231	0.97

Sequence Information

Coding Sequence: ATGGTACAAGTTTTACCGTCTCCGCTCGTTACGCGGACGATATATAAGGGAACGCGCAACGAGGCCGGCCGGATTCGTAATATCGTTACGTGTACACATGACGTGGAGGCCTTAGGAACCGGAAGTTCCTCGTGGCACAGCGAGGATGGCGGACCCAACTCGCGTCGCGGTGGCGAGACACCGTCTTCCTGCGCGACACCGACGTCAGCGAGTTTCCCGTCGGAACCTGAGGTCGACGCTGACGGCAGTGTCAACCCCGAGAGCAACAACCCCGCCGCCCCGTATCCCTGTCAGTTCTGCGACAGAACGTTTCCTCGGCTCAGTTATTTGAAGAAGCACGAACAGAGCCACGGCGATCAGATGCCGTATCGATGCAATTGGTGCGCCAGATTGTTCAAGCACAAGCGTAGTCGCGATCGTCACATAAAGCTGCACACCGGGGACAAGAGATATCGTTGCGTACAATGCGAGGCCGCATTCTCCAGGAGTGACCACTTGAAGATTCACATGAAGACGCACGACACCCAGAAACCTTACCAGTGCACAGCCTGTTCGAGAGGCTACAACACAGCCGCGGCCTTGACGTCGCACATGCAATCCCACAAGAAGCATCATCAGTCATCCTCCCAGTCGACCGGCAAGCTTCAAGACGTCGACTACGGCAGAAGAAGCGTGTCCTCGCACAGCACGTCGTCGCCACCGATACCATCGTCGCCGTCGCCATCGCTGAATCTCAGTCTGAACACGAGAAACGTTCTGAAGACGTCGCAGAGCAGTGCCTCCACCACGCCCGTTCTCAGCTCGCCGCTAAAGCTCGCTTGCATGTACTGCACGCGGGACTCGTTCAGTTGCATGCAACAGCTCCAGATGCACGTGCACACCATGCACCAGGCGATTCTGAGCGGCGCGGAGGATTTGGCGCGACCGCCGTCACCGAGCAGACCGCCGAGCGAGCAACGGACAACCGTCTGCAAACCGTTGGAGCATCAAGACAGTTCGAAAAGCTCGCGTGCGGACCGAAAATATCCGGTCGAGGATCGGAACGAGAGACCCAGCGAACGAGATCACTACGAAAACGCGTTTACCTGCAACCAGTGCACCATGAAGTTCTCCACGCTGGCCTGTCTGCGCGATCACTTGCTGTCGACTCATCGACACGACACCGTTTACGGCGCGGCGATCATGATGTGCCCGCTGTGCGGTATTCCATGTCCCACACCGACCAATTACGCCGAGCACTACGTTCTTCAGCACTGCGAGAACCGTCGCCCTGCGCCGCCTACCGCCATGGATTACGGGGAAACGAAGCTGAACGGCGTTTATGACAGTACGGCGAGAGACTCTAGAGTGTCGCGAAGTAGAGACGCGCCGGAAGCGGCAGACCTCACAAATAAGCACGCGACTAGACCTATTTCGGATACTGCCGGTGGATACACTGCTGGTACTCTGCTGTGCGGCCAATGCGGCGCCGCCTTGAAGGACTTCGAATCATTTCGCGAACACGTAGCGCGTCACTTGCAGGCTGATCAACGTAGTCAGGAAGTATCCAACCGGCAACATCCGTGTCCCAAGTGCGAAGCCGTCTTTCCGAATCGCGAGGACATGCTGGCTCACCTGACCAAACACTATCTGGGCCAGCTCAGCAAAGAGTACGCGTGCGGCGCGTGCAAGAAGCTCTATCCGCATCCGGACCAGCTTCAGAGGCACTTGTTAGATGTGCACGCACATCATTTATACCGTTGCGCGCTTTGCCGGGACACTTTTGACTCTCGAGTGGCGATACAGGTGCACTTCGCGGTGAAGCACAGCCAGGAGTGTCGGATCTATCGGTGCAGCGCATGTGCTTTGTCAAATAATGAAAACTCGCCGCCCGGAACGAACTCGGCGGCTAGCGACGACAGGAGCTACTTCAGGAGCGAGGCCGAAATGGCCGCGCACGTGCGCAGCGTCCACGCACCTCCGCTCACTGCGTCTTTGATGAGCAGCAGTCCAGTGGGAGCTGCGAGGAGCCCAGCTTCAACGCCCGGCGGTGTCCCACGCTGCGTCTTCTGCGGAATCTGCTGCAATTCGGATCTAGAGCTTCAGCTTCATCTGGCCAGTCACTCGACGAATCTCTACAGATGTCCTGTCTGCAGGGAGGGCTTTGCGGTGGAATTCCTGCTGGACCGGCACGTTGCTCAGGCTCATCACACGACTACTCAGGAACACCAAGTGTCATCCGTCAGAAGTAGTTCAAGGGAGAACGGTCGAGTTCATCGACCGAACAGAAATCAGGAAGAAACAAAATCCTTGAAGAGGGGCCGTTCGCCGGCGTCGAGCAACAACAACTCCCTGAATCAGCGTGATAATAACAACAAACGTCCAGCTTACGGCACTTCCGGCGGTCAACAGTGTGAACTCTGCGAACGCGGCGAGTTCGCGAACGAAGCCGAGCTGCAGGCGCACAAGAAACTCGCGCACACACCCGCCAAACTGTCTAGCAAGAGTCTGTCAGCCCTGAGCATGACGTGCGGCTATTGCGGCGAAGTCTGCCGCTCGCGGAGCGAGCTGGAGTCGCACACGAGGATTCAGCACGCGTCCAGCGAGCCTGGCGGACGTCACAAGTGCAACATTTGCGACGAGGTGTGTCCGTCCGGCGCGAGCCTGGCCGAGCACAAATTGCAGAAACATTGCAAGATCCAATTGAGCAACACATGCGTGGTATGTCGTGGCTGTCTGACCACGGAGAGTCAATTCCTGGACCACGTGCAGAGACACAGCCTAGAGAACGTGGACCCGCAGCAACGACTCGATAATTCTCTGTCTCATTTGCCCGCAGCGTGCGTCGTCTGTCGACAAACGTTGATCAGCGATCTGGAATGCCGTCTGCACGCGAGGCATCATTTGCGAAATTCTTCAGGATCACGCAGCGCCGGTTCCAGCCCGACCAGTCCCGGAAAAGGACAGAGCCAGAGTTGCTGTCTTTGCCTGCGAGATTTCGCGATCGAGGACTTTGTCAGTCTGCCGCCCAATCCCGCCAGTACAAGCGGACAGCCGGTCAGAGTTTGCAAACCTTGTTACATGCGACATTCTCAGGGATTGCCTATTTTAAATTCGACTTATGATCAACGAGCCAAGTACGAAGTGCCCTGGCTCGCCAAGGACGGTCAGTGGGACGGCTCTAAGGACAAGTGGGAACACGATAGAAGACTTAAGGCAGAAGATCAGTCTAGGAATGAAGGAAATACGGAAAAGAAACGGTGTGAAGAGTGCGGGGTAAAGTTTGAAGATCCTGAAGAGGCGGAAAAACATAGGATCGCTGAACACGAAAAATCTAACGGTGATGGCTCGAATTCCTACTCTTGTATACAATGTCAGATGTCCTTTCCCACCGAAGCGCTGATTCAGCAGCACGTGAGGAAAGAGCACCTTGAAACGTCCGGAAAATCGACTTTGGAAGCTTTGCGATGTCATTTGTGCTTGTTCGAAGCCGCCAATCCTATGCAGTTGCAGATTCATTTGATAGAACACACTTTCGCTGGCTGTGCCGCTCTTAGCTGTTACATTTGTCAGTCGCTCTTTACAACTCCCGTTGGCCTTCAGAATCACATGCTGCAGGAGCACGGACTGGGCGCTCGACCGTACGATTGCTCCAAGTGCACGCTCAAGTTCTTCTTTAGAGCGGAGCTGGATCATCACGTGTTAACTTTTCATCGTCCGGGAGAGGAAACACTTTCGTCATTACCTGAGAACGCTCGCGAAACAAAAAATTGCGAGCCTGAAGAGCGCAATTGCGACAACGGGGTGACGATAAAGAAAGAAGTGATACAAGGCGGCGAGGAAGAGGAGGACGAGGAAGTGAACGTGGATCAAGTGGGGCATGAAGAGCACGAGGAAGCTGGAGCACGAGAAGAGCAGAAGCTGAAGACGGAAGCGGACAACGAGACAACTTCCGGCAAAACGGAGTCGTGA
Protein Sequence: MVQVLPSPLVTRTIYKGTRNEAGRIRNIVTCTHDVEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADGSVNPESNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCNWCARLFKHKRSRDRHIKLHTGDKRYRCVQCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQSSSQSTGKLQDVDYGRRSVSSHSTSSPPIPSSPSPSLNLSLNTRNVLKTSQSSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEDLARPPSPSRPPSEQRTTVCKPLEHQDSSKSSRADRKYPVEDRNERPSERDHYENAFTCNQCTMKFSTLACLRDHLLSTHRHDTVYGAAIMMCPLCGIPCPTPTNYAEHYVLQHCENRRPAPPTAMDYGETKLNGVYDSTARDSRVSRSRDAPEAADLTNKHATRPISDTAGGYTAGTLLCGQCGAALKDFESFREHVARHLQADQRSQEVSNRQHPCPKCEAVFPNREDMLAHLTKHYLGQLSKEYACGACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSACALSNNENSPPGTNSAASDDRSYFRSEAEMAAHVRSVHAPPLTASLMSSSPVGAARSPASTPGGVPRCVFCGICCNSDLELQLHLASHSTNLYRCPVCREGFAVEFLLDRHVAQAHHTTTQEHQVSSVRSSSRENGRVHRPNRNQEETKSLKRGRSPASSNNNSLNQRDNNNKRPAYGTSGGQQCELCERGEFANEAELQAHKKLAHTPAKLSSKSLSALSMTCGYCGEVCRSRSELESHTRIQHASSEPGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSNTCVVCRGCLTTESQFLDHVQRHSLENVDPQQRLDNSLSHLPAACVVCRQTLISDLECRLHARHHLRNSSGSRSAGSSPTSPGKGQSQSCCLCLRDFAIEDFVSLPPNPASTSGQPVRVCKPCYMRHSQGLPILNSTYDQRAKYEVPWLAKDGQWDGSKDKWEHDRRLKAEDQSRNEGNTEKKRCEECGVKFEDPEEAEKHRIAEHEKSNGDGSNSYSCIQCQMSFPTEALIQQHVRKEHLETSGKSTLEALRCHLCLFEAANPMQLQIHLIEHTFAGCAALSCYICQSLFTTPVGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEETLSSLPENARETKNCEPEERNCDNGVTIKKEVIQGGEEEEDEEVNVDQVGHEEHEEAGAREEQKLKTEADNETTSGKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_01267069;
80% Identity: -