Basic Information

Insect: Pseudomyrmex flavicornis
Gene Symbol: znf423
Assembly: GCA_014825475.1
Location: QVNW01004224.1:2419-6921[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00019 0.02 15.7 0.2 1 23 10 32 10 32 0.99

2 18 0.0014 0.15 13.0 3.1 1 23 192 215 192 215 0.97

3 18 0.038 4 8.5 0.1 2 23 227 249 226 249 0.89

4 18 0.36 38 5.4 0.1 3 23 316 336 315 336 0.97

5 18 0.00095 0.1 13.5 0.1 1 23 351 373 351 373 0.97

6 18 0.0049 0.52 11.3 0.2 1 23 382 405 382 405 0.92

7 18 3.2 3.4e+02 2.4 0.2 1 23 410 433 410 433 0.91

8 18 0.78 83 4.3 2.1 2 23 511 532 511 532 0.96

9 18 0.024 2.6 9.1 0.1 1 23 537 560 537 561 0.93

10 18 2.9 3.1e+02 2.5 0.1 2 23 628 651 627 651 0.81

11 18 2.9e-05 0.0031 18.2 1.0 2 23 667 689 666 689 0.96

12 18 0.025 2.6 9.0 0.9 1 23 698 721 698 721 0.93

13 18 0.97 1e+02 4.0 1.4 2 23 729 750 729 750 0.96

14 18 0.0095 1 10.3 0.0 2 23 911 933 910 933 0.92

15 18 0.081 8.7 7.4 0.2 1 23 944 967 944 967 0.94

16 18 0.9 96 4.1 0.1 2 23 980 1001 979 1001 0.94

17 18 0.011 1.2 10.1 0.1 2 23 1010 1032 1009 1032 0.94

18 18 0.092 9.8 7.2 3.0 1 23 1039 1062 1039 1062 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00019	0.02	15.7	0.2	1	23	10	32	10	32	0.99
2	18	0.0014	0.15	13.0	3.1	1	23	192	215	192	215	0.97
3	18	0.038	4	8.5	0.1	2	23	227	249	226	249	0.89
4	18	0.36	38	5.4	0.1	3	23	316	336	315	336	0.97
5	18	0.00095	0.1	13.5	0.1	1	23	351	373	351	373	0.97
6	18	0.0049	0.52	11.3	0.2	1	23	382	405	382	405	0.92
7	18	3.2	3.4e+02	2.4	0.2	1	23	410	433	410	433	0.91
8	18	0.78	83	4.3	2.1	2	23	511	532	511	532	0.96
9	18	0.024	2.6	9.1	0.1	1	23	537	560	537	561	0.93
10	18	2.9	3.1e+02	2.5	0.1	2	23	628	651	627	651	0.81
11	18	2.9e-05	0.0031	18.2	1.0	2	23	667	689	666	689	0.96
12	18	0.025	2.6	9.0	0.9	1	23	698	721	698	721	0.93
13	18	0.97	1e+02	4.0	1.4	2	23	729	750	729	750	0.96
14	18	0.0095	1	10.3	0.0	2	23	911	933	910	933	0.92
15	18	0.081	8.7	7.4	0.2	1	23	944	967	944	967	0.94
16	18	0.9	96	4.1	0.1	2	23	980	1001	979	1001	0.94
17	18	0.011	1.2	10.1	0.1	2	23	1010	1032	1009	1032	0.94
18	18	0.092	9.8	7.2	3.0	1	23	1039	1062	1039	1062	0.97

Sequence Information

Coding Sequence: ATGAAGACGCACGACACCCAGAAACCTTACCAGTGCACAGCCTGTTCGAGAGGCTACAACACAGCCGCGGCCTTGACGTCGCACATGCAATCCCACAAGAAGCATCATCAGTCATCCTCCCAGTCGACCGGCAAGCTTCAAGACGTCGACTACGGCAGAAGAAGCGTGTCCTCGCACAGCACGTCGTCGCCACCGATACCATCGTCGCCGTCGCCATCGCTGAATCTCAGTCTGAACACGAGAAACGTTCTGAAGACGTCGCAGAGCAGCGCCTCCACCACGCCCGTTCTCAGCTCGCCGCTAAAGCTCGCTTGCATGTACTGCACGCGGGACTCGTTCAGTTGCATGCAACAACTGCAGATGCACGTGCACACGATGCACCAGGCGATTCTGAGCGGCGCGGAGGATTTGGCGCGACCGCCGTCACCGAGCAGACCGCCGAGCGAGCAACGGACAACCGTCTGCAAACCGTTGGAGCACCAAGACAGTTCGAAGAGCTCGCGTTCGGACCGAAAGTATCCGGTCGAGGATCGGAACGAGAGACCCAGCGAACGAGATCACTACGAAAACGCGTTTACCTGCAACCAGTGCACCATGAAGTTCTCCACGCTGGCCTGTCTGCGCGATCACTTGCTGTCGACTCACCGACACGACACCGTTTACGGCGCGGCGATCATGATGTGCCCGCTGTGCGGTATCCCATGTCCCACGCCGACCAATTACGCCGAGCACTACGTTCTTCAGCACTGCGAGAACCGTCGCCCTGCGCCGCCTACCGCCATGGATTACGGGGAAACGAAGCTGAACGGCGTTTATGACAGTACGGCGAGAGACTCCAGAGTGTCGCGAAGTAGAGACGCGCCGGAAGCGGCGGACCTCACAAATAAGCACGCGACTAGACCTATTTCGGATACTGCCGGTGGATACACCGCTGGTACTCTGCTGTGCGGCCAATGCGGCGCCGCCTTGAAGGATTTCGAATCATTTCGCGAGCACGTAGCGCGTCACTTGCAGGCTGATCAACGTAGTCAGGAAGTATCCAACCGGCAACATCCGTGTCCCAAGTGCGAAGCCGTCTTTCCGAATCGCGAGGACATGCTGGCTCATCTGACCAAACACTATCTGGGCCAGCTCAGCAAGGAGTACGCGTGCGGCGCGTGCAAGAAGCTCTATCCGCATCCGGACCAGCTTCAGAGGCATCTGTTAGATGTGCACGCACATCATTTATATCGTTGCGCGCTTTGCCGGGACACTTTCGATTCTCGAGTGGCGATACAGGTGCACTTCGCGGTGAAGCACAGCCAGGAGTGTCGGATCTATCGGTGCAGTGCATGTGCTTTGTCAAATAATGAAAACTCGCCGCCCGGAACGAACTCGACGGCTAGCGACGACAGGAGCTACTTCAGGAGCGAGGCCGAGATGGCCGCGCACGTGCGCAGCGTGCACGCACCTCCGCTCACCGCGTCCCTGATGAGCAGCAGTCCAGTGGGAGCTGCGAGGAGCCCGGTTTCAACGCCCGGTGGTGTCCCACGCTGCGTCTTCTGCGGAATCTGCTGCAACTCGGATCTAGAGCTTCAGCTTCACCTGGCCAGTCACTCGACGAATCTCTACAGATGTCCTGTCTGCAGGGAGGGCTTTGCTGTGGAATTCCTGCTGGACCGGCACGTTGCTCAGGCTCATCACACGACGACTCAGGAACACCAAGTGTCATCCGTCAGAAGTAGTTCAAGGGAGAACGGTCGAGTTCATCGACCGAGCAGAAATCAGGAAGAAACAAAATCCTTGAAGAGAGGCCGTTCGCCAGCGTCGAGCAACAACAACTCCCTGAATCAGCGTGACAATAACAACAAACGTCCAGCTTACGGCACTTCCGGCGGTCAACAGTGTGAACTCTGCGAACGCGGCGAGTTCGCGAACGAAGCCGAGCTGCAGGCGCACAAGAAACTCGCGCACACACCCGCCAAATTGTCCAGCAAGAGTCTGTCAGCCTTGAGCATGACGTGTGGCTATTGCGGCGAAGTCTGCCGCTCGCGGAGCGAGCTGGAGTCGCACACGAGGATTCAGCACGCGTCCAGCGAGCCTGGCGGACGTCACAAGTGCAACATTTGCGACGAGGTGTGTCCGTCCGGCGCGAGCCTGGCCGAGCACAAATTGCAGAAACATTGCAAGATCCAATTGAGCAACACATGCGTGGTATGTCGTGGCTGTCTGACCACGGAGAGTCAATTTCTGGACCACGTGCAGAGACACAGCCTAGAGAACGTGGACCCGCAGCAACGACTCGATAATTCTCTGTCTCATTTGCCCGCAGCGTGCGTCGTCTGTCGACAAACGTTGATCAGCGATCTGGAATGCCGTCTGCACGCGAGGCATCATTTGCGAAATTCTTCAGGATCACGCAGCGCCGGTTCCAGCCCGACCAGTCCCGGAAAAGGACAGAGCCAGAGCTGCTGTCTTTGCCTGAGAGATTTCGCGATCGAGGACTTCGTCAGTCTGCCGCCCAATCCCGCCAGTACAAGCGGACAGCCGGTCAGAGTTTGCAAACCCTGTTACATGCGACATTCTCAGGGATTGCCTATTTTAAATTCGACTTATGAGCAACGAGCCAAGTACGAAGTGCCCTGGCTCGCCAAGGACGGTCAGTGGGACGGCTCTAAGGACAAGTGGGAACACGATAGAAGACTTAAGGTAGAAGATCAGTCTAGGAATGAAGGAAATGCAGAAAAGAAACGGTGCGAAGAGTGCGGGGTAAAGTTTGAAGATCCTGAAGAGGCGGAAAAACATAGGATTGCTGAACACGAAAAATCTAACGGTGATGGCTCGAATTCCTACTCTTGTATACAATGTCAGATGTCCTTTCCCACCGAAGCGCTGATTCAGCAGCACGTGAGGAAAGAGCACCTTGAAACGTCCGGGAAATCGACTTTGGAAGCTTTGCGATGTCATTTGTGCTTATTCGAAGCCGCCAATCCTATGCAGTTGCAGATTCATTTGATAGAACACACTTTCGCTGGCTGTGCCGCCCTTAGCTGTTACATTTGTCAGTCGCTCTTTACAACTCCCGTTGGCCTTCAGAATCATATGCTGCAAGAGCACGGGCTGGGTGCTCGACCGTACGATTGCTCCAAGTGCACGCTCAAGTTCTTTTTTAGAGCGGAGCTGGATCATCACGTGTTAACTTTCCATCGTCCGGGAGAGGAAACACTTTCGTCATTACCTGAGAACGCTCGCGAGGCGAAAAATTGCGAGCCTGAAGAGCGCAACTGCGACAACGGGGTGACGATAAAGAAAGAAGTGATACAAGGCGGCGAGGAAGAGGAGGATGAGGAAGTGAACGTGGATCAAGTGGGGCATGAAGAGCACGAGGAAGCTGGAGCACGGGAAGAGCAGAAGCTGAAAACGGAAGCGGACAACGAGACGACTTCCGGCAAAACGGAGTCGTGA
Protein Sequence: MKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQSSSQSTGKLQDVDYGRRSVSSHSTSSPPIPSSPSPSLNLSLNTRNVLKTSQSSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEDLARPPSPSRPPSEQRTTVCKPLEHQDSSKSSRSDRKYPVEDRNERPSERDHYENAFTCNQCTMKFSTLACLRDHLLSTHRHDTVYGAAIMMCPLCGIPCPTPTNYAEHYVLQHCENRRPAPPTAMDYGETKLNGVYDSTARDSRVSRSRDAPEAADLTNKHATRPISDTAGGYTAGTLLCGQCGAALKDFESFREHVARHLQADQRSQEVSNRQHPCPKCEAVFPNREDMLAHLTKHYLGQLSKEYACGACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSACALSNNENSPPGTNSTASDDRSYFRSEAEMAAHVRSVHAPPLTASLMSSSPVGAARSPVSTPGGVPRCVFCGICCNSDLELQLHLASHSTNLYRCPVCREGFAVEFLLDRHVAQAHHTTTQEHQVSSVRSSSRENGRVHRPSRNQEETKSLKRGRSPASSNNNSLNQRDNNNKRPAYGTSGGQQCELCERGEFANEAELQAHKKLAHTPAKLSSKSLSALSMTCGYCGEVCRSRSELESHTRIQHASSEPGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSNTCVVCRGCLTTESQFLDHVQRHSLENVDPQQRLDNSLSHLPAACVVCRQTLISDLECRLHARHHLRNSSGSRSAGSSPTSPGKGQSQSCCLCLRDFAIEDFVSLPPNPASTSGQPVRVCKPCYMRHSQGLPILNSTYEQRAKYEVPWLAKDGQWDGSKDKWEHDRRLKVEDQSRNEGNAEKKRCEECGVKFEDPEEAEKHRIAEHEKSNGDGSNSYSCIQCQMSFPTEALIQQHVRKEHLETSGKSTLEALRCHLCLFEAANPMQLQIHLIEHTFAGCAALSCYICQSLFTTPVGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEETLSSLPENAREAKNCEPEERNCDNGVTIKKEVIQGGEEEEDEEVNVDQVGHEEHEEAGAREEQKLKTEADNETTSGKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_01267069;
80% Identity: -