Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000185.1:3476941-3493076[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.27 14 6.6 1.2 1 23 244 267 244 267 0.90

2 24 2.6e-05 0.0014 19.2 1.1 1 23 273 296 273 296 0.97

3 24 0.00032 0.017 15.8 1.3 2 23 326 347 325 347 0.96

4 24 0.00096 0.052 14.3 1.7 1 23 427 450 427 450 0.96

5 24 0.27 15 6.5 0.6 2 23 458 479 457 479 0.97

6 24 0.0024 0.13 13.0 1.4 2 23 524 545 523 545 0.97

7 24 0.015 0.8 10.5 0.3 2 20 558 576 557 579 0.93

8 24 0.045 2.4 9.0 4.9 1 23 660 682 660 683 0.95

9 24 0.0014 0.074 13.8 0.5 1 21 690 710 690 711 0.95

10 24 0.038 2.1 9.2 1.2 1 23 722 745 722 745 0.94

11 24 0.0004 0.022 15.5 0.4 2 23 760 781 759 781 0.97

12 24 5.4e-07 2.9e-05 24.5 1.1 1 23 787 809 787 809 0.97

13 24 0.017 0.94 10.3 2.3 1 23 958 982 958 982 0.97

14 24 0.0055 0.3 11.9 3.7 1 23 1052 1075 1052 1075 0.94

15 24 0.016 0.88 10.4 1.8 1 23 1082 1104 1082 1104 0.92

16 24 0.007 0.38 11.6 0.1 2 19 1131 1148 1130 1150 0.95

17 24 0.022 1.2 10.0 5.3 1 23 1208 1231 1208 1231 0.97

18 24 1.9 1e+02 3.9 1.2 1 23 1268 1291 1268 1291 0.94

19 24 0.073 4 8.3 6.2 1 23 1323 1346 1323 1346 0.97

20 24 1.5e-06 8.2e-05 23.1 0.5 2 23 1376 1397 1375 1397 0.95

21 24 7e-06 0.00038 21.0 0.4 1 23 1403 1425 1403 1425 0.99

22 24 7.6e-07 4.1e-05 24.0 2.6 1 23 1431 1453 1431 1453 0.98

23 24 5.5e-06 0.0003 21.3 1.8 1 23 1459 1481 1459 1481 0.99

24 24 0.062 3.4 8.6 0.7 1 22 1487 1508 1487 1511 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.27	14	6.6	1.2	1	23	244	267	244	267	0.90
2	24	2.6e-05	0.0014	19.2	1.1	1	23	273	296	273	296	0.97
3	24	0.00032	0.017	15.8	1.3	2	23	326	347	325	347	0.96
4	24	0.00096	0.052	14.3	1.7	1	23	427	450	427	450	0.96
5	24	0.27	15	6.5	0.6	2	23	458	479	457	479	0.97
6	24	0.0024	0.13	13.0	1.4	2	23	524	545	523	545	0.97
7	24	0.015	0.8	10.5	0.3	2	20	558	576	557	579	0.93
8	24	0.045	2.4	9.0	4.9	1	23	660	682	660	683	0.95
9	24	0.0014	0.074	13.8	0.5	1	21	690	710	690	711	0.95
10	24	0.038	2.1	9.2	1.2	1	23	722	745	722	745	0.94
11	24	0.0004	0.022	15.5	0.4	2	23	760	781	759	781	0.97
12	24	5.4e-07	2.9e-05	24.5	1.1	1	23	787	809	787	809	0.97
13	24	0.017	0.94	10.3	2.3	1	23	958	982	958	982	0.97
14	24	0.0055	0.3	11.9	3.7	1	23	1052	1075	1052	1075	0.94
15	24	0.016	0.88	10.4	1.8	1	23	1082	1104	1082	1104	0.92
16	24	0.007	0.38	11.6	0.1	2	19	1131	1148	1130	1150	0.95
17	24	0.022	1.2	10.0	5.3	1	23	1208	1231	1208	1231	0.97
18	24	1.9	1e+02	3.9	1.2	1	23	1268	1291	1268	1291	0.94
19	24	0.073	4	8.3	6.2	1	23	1323	1346	1323	1346	0.97
20	24	1.5e-06	8.2e-05	23.1	0.5	2	23	1376	1397	1375	1397	0.95
21	24	7e-06	0.00038	21.0	0.4	1	23	1403	1425	1403	1425	0.99
22	24	7.6e-07	4.1e-05	24.0	2.6	1	23	1431	1453	1431	1453	0.98
23	24	5.5e-06	0.0003	21.3	1.8	1	23	1459	1481	1459	1481	0.99
24	24	0.062	3.4	8.6	0.7	1	22	1487	1508	1487	1511	0.90

Sequence Information

Coding Sequence: ATGTCGAGCGATATTAAAGGTGAATGTATTATAAATGGGGTACGTTATAAATGTCGTACTTGCTTTGACCCAGGACGTTCAGTCTACTCCTTGTCGGATAAGGCCAGCCACACAAAAACATGGAATGACTTATTAAAGGATATTGCTAAGTTGCAGACAAGCAGCGAGAATGTACTCCCTAAGACTATGTGTTGCAAGTGTTCGGGAAAACTTAAAAGTTCATATGATTTTATACTTCAGATACATAATGTGAATAAAAAATACCTACAACTGTTGTCAAGTGCTGTTGATCCACTACAGGAAATTGACAACTTTAACGATTGCTTAGCAGAGACCACAATTGATTTGCCATTAGAGATAAAATTAGAAGAAGAATTGGTTGAGCCATTGAACACTGATTTAATCAACAAAGTAACAGCAAGTCACAATAAAACAAAACCGGAAAGTAAAGacgcttacgattccttaatggatgattttaatgAGGATTTGAATTCTACTTTTGAGCAATTGGAAGAAAACGAAAGATATAATAGAAATGTTAAGGCTTTAATATCAGAATTATATTTTAGTTCTACATCATCTGATGAAAGCGACGACTACGTGCCTCTCAAAAAGTTGAAGAAAGAGAATAACCGTAGCCTTAGCAGTAGCAGTCAGCCAGTCAAACGAAGAAAAGGTCGACAAGCTCCAGACTATTATGATAAAATTGAAAAGGTTAACGATCGCTTTGCCTGTCTCATTTGTCAAAAGACATTTTCGTTACGAAAAGATTGTGGTCGTCACATAGCATCGATACACTTGCGTCATACCATGTTTCCTTGCGAATTTTGTGGACAAAGTTTTAGCCGCAAAGACAAGATACAACAACACATTAAGCGCATGCATACAGATATAACAGTGTATCCAGCTAAACATAAGGAATGGTTATTTGGAGATCGTTTATATAGTAAACCGATCGCTTGGCAACTTGTGGAATGTAAATTATGTGATACAAAATTTACAAGAACGAAAGACCTGCGTCAACATTTAGAAAATCATAGTGATATAGACACGCTTCATCATTTAGAATTAAGCGATAACATTATCCAACATTTGTATCCCAATATGATTGATTTAGACTTTGTTAAGGGGAGTATATGCAAGGATATTATAGAGAAGCATTGGTTTAAATATTACACAGTGTTAAATGAACATTCATATGAAATGTCTATTAGTGACACGGAAACGGAAGATGTGGAGGAAGAAGAAGGTGTATCAGCAGAGCGTGCCAACAAATACAAGTGCGATTTGTGTGCTAAAGTGTTTTCTTACAAGTATCAAGTTTTCACTCATTTAAAAGAAACTCATGGCAATGACGAAATTCCTTTGAAATGTGGTCTGTGTAAATTGGAATTCATTTCAATTAAAATGTACGAACAACACTCAAAAACCCACTGTCGCAATAGGCATAAAGTTTTACTTTGTGCTCATTGCCCGGCCAAGTTTGTTTGGCCAGATAATATGAAAAATCACAATTGTGCAACCAAAATATCATTAAGTGCAAAGGCTACTTCTAAAGCTAAACTCACATGTAATATATGTGAACGTAAATTTGAGGTAAAAACTAAATTTTTAAAACATTTGGAGACTCATAGAGATGGCAGGTTGGTATCTTCCAAAACAATAATACGGTGCGCACTTTGTCCACAATCCTTTGAAAAACTACGGCAGTTGCGCCAACATATGCCCCAGCATTCCGATGGCAAAACGGATATTGACTTTAAACACAGTCTTTATGTTAAGCGTTTTGAACGTACAAAATCGATCGATTATGCACTGTTACAGCAGGAGATACAAAACGCCTACAAAAAGTCGCAGATTAGTCGTTTTTACAGAGCCATCGATAAGGATGGTAATGAATTGGATATTTTAGATTCGGATAGTGATGTAGAGGAGGAGAAAGTAGACGCTGATGGGGAAAATGTTAAAAAGGAATACACGTGTGAACTTTGCATTGAAGTGTTTAAAAGACGAAAATACCTTTTAAAACATCAACATGAACATCACAATGATGTGCCACTGCCCTTTAAGTGCAAGGACTGCACCCAGCAATATGTTAGTAATGATTTGTTGCAACAACATTTGCTAAGGGATTGCTGGAATGAACACCGACGTATAGCTCATCAATGTGATTATTGTAATGCTCGTTTTATATGGCCAAATAATCTCTTTAAACATAAAGAAATTCAGCATAAAAATCAAAAACAACCAAAACCACAAAGAGCGAGTACCCTTAAGTGTGAATACTGTGAGAAGGTATTCATATGGCCTAAGGATTTAGTGCGCCATAGAAAGACCCATACTGAAGGCAAAAAATTCGCCTGTCCACATTGTGATCGTAAATTTCAACGCAAAGATAATTTGTTAGCTCACATACGAATACATTGTCCTGATGGTATCCCCACAATGTCAAATCCTGGTAAAGGTATCAATTATATACTGCCGCATTTATTAAAACCGCATGGCTGCAAACGTATCCAGTGCATGATTTGCTTTTCCGAACATAATCGCATACGCGACTTAAGATCCCACCTACGAACACATCGATTTTCGGTTAATTTTGATAAAAGAAAAGAAAAGGAAACATTTGATACTATATCATCTCAGCTCTATCCTGATGAAACGGTGTCTCTGACAGAAGAGGAAATTGTAAAACGTATTAGTGCTGATATTGCATCAGAAAACAATTTGGAACGTTTTTACTCTATAACAAGTGAAAACGGCAACGAAGTCAGTTTAGATAGTTCGGAAACAGAAAGCGATTCTGATGATGATAATGATGAAGAAAATGACGATGAAAACGATGCAAATATTAAATCCAGGCGCGAATATAAATGTGATTTATGTCCTCAATTGAGTTTCAATCGTAAATATAAACTTTTCGAACACCAGAACAAACAACATAAATGGGAGGAAGCTCGTCACATGTGTATGCATTGTAATGGGCGATTTCTTTCGTCATATATGCTGCAACTACACTATAAGAATCAATGTAAAAATAGTAAAAAACGCCACTTTTGTCGCCGTTGTCCCTTGCGTTTTATGTGGAAAAATAATATGAAGACACATATTGTAATGGAACATGGTCAGGAGATCGATTTAAATCGTCGTCATGAATGTTTCCTATGCCAAGAAAAGTTCACGTTTCAAAAAGAACTAAAACGTCATTTGACCAATGATCATTCCGCCGATGCAGCACTCCATTATTGTCTTCTATGTCCCAAGACATTCTTTAATATTGAACATCTTAATGAGCATTTGGGTGGTCATCGTTTGACCACAGCCGATGTCACGACGGTTGAAAGTGTAATACATTCCACATGTTGGCCGAATGGGGAAAAAACAATTAAATGTAAAATATGTGGTCTAATTTTCGATACTATGGCCAACTTGAGAGAACATTTTTCACCTAAAAATCCCCAAAATGTGTGCGCCAATCAACATTCATTATCAAATTACTCGATTACGAATCAAAAAGGATTCGAATTACATTTAGAACTGGACTCTGAAACAGAAATAGAAGATGAATCAGAAACGGCAGCGGCAGCTAATAAAGGCAACAAAAGGCCTATGTATCCCTACAACTGTTGCATGTGTAGTATGTCATTTAAGCGAAAGTATCGCATGGCTCAACACCAACGTTCTATGCATAATTATGAAGTACTAGAGCTAAAATGTGAACGATGCATTTTTAGGACGGTCTCACAGaaagtattagattaccataaggccacacagtgttttaattcagaaaaacaatatgaatgtattcattgcaatttcaaatttatgtgggaagaaaatcttaatagtcatattgccacatttcatactccaaaagaTTTACCTAGGGAAACGGACATCGTTAAGATGGTAACTGCTATTGAGCCTATACCAGCCAACAGTAAAAGCGAGACCAATATTTTTGAATGTATGGATTGTCATCGACGCTACAACCGTAAAGATCGCTATAAAGCTCATTTTAAAAAATTCCACAGTAATGATTTGCAATTAAGAACTGATTCCAAGGTTTTTGCTACAAGACCTCGAAaacagcctagcaaaagtttggaaaagaaatttttatgtgccttttgtggcctgtcttttgcaaacaattcgaatctaacggtgcacatgagacgacacacaggtgagaaaccattcaaatgcgatctttgcgaaatggcttttccacgaacatccgatttgcaggctcatcgacgaacacatactggcgaacgtccttttaaatgcgaatattgcgacaaatcattttctaggcaatacaaattaaatgttcacaatcgtattcataccggcgaacgtccgtatcaatgtacattttgtgaaaaatcatttattcaatcaaatgatttgactttacatttgcgtcgtcatacaggtgaaagaccctatatgtgtgacatttgcggagaaggtttcatatgtgccacatcactgaaacagcatcgtacttcaaggggccatcatgaagaaaaaattgatttaaaaatgttggcacaaTTCGATATGAAGTTTTAA
Protein Sequence: MSSDIKGECIINGVRYKCRTCFDPGRSVYSLSDKASHTKTWNDLLKDIAKLQTSSENVLPKTMCCKCSGKLKSSYDFILQIHNVNKKYLQLLSSAVDPLQEIDNFNDCLAETTIDLPLEIKLEEELVEPLNTDLINKVTASHNKTKPESKDAYDSLMDDFNEDLNSTFEQLEENERYNRNVKALISELYFSSTSSDESDDYVPLKKLKKENNRSLSSSSQPVKRRKGRQAPDYYDKIEKVNDRFACLICQKTFSLRKDCGRHIASIHLRHTMFPCEFCGQSFSRKDKIQQHIKRMHTDITVYPAKHKEWLFGDRLYSKPIAWQLVECKLCDTKFTRTKDLRQHLENHSDIDTLHHLELSDNIIQHLYPNMIDLDFVKGSICKDIIEKHWFKYYTVLNEHSYEMSISDTETEDVEEEEGVSAERANKYKCDLCAKVFSYKYQVFTHLKETHGNDEIPLKCGLCKLEFISIKMYEQHSKTHCRNRHKVLLCAHCPAKFVWPDNMKNHNCATKISLSAKATSKAKLTCNICERKFEVKTKFLKHLETHRDGRLVSSKTIIRCALCPQSFEKLRQLRQHMPQHSDGKTDIDFKHSLYVKRFERTKSIDYALLQQEIQNAYKKSQISRFYRAIDKDGNELDILDSDSDVEEEKVDADGENVKKEYTCELCIEVFKRRKYLLKHQHEHHNDVPLPFKCKDCTQQYVSNDLLQQHLLRDCWNEHRRIAHQCDYCNARFIWPNNLFKHKEIQHKNQKQPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFACPHCDRKFQRKDNLLAHIRIHCPDGIPTMSNPGKGINYILPHLLKPHGCKRIQCMICFSEHNRIRDLRSHLRTHRFSVNFDKRKEKETFDTISSQLYPDETVSLTEEEIVKRISADIASENNLERFYSITSENGNEVSLDSSETESDSDDDNDEENDDENDANIKSRREYKCDLCPQLSFNRKYKLFEHQNKQHKWEEARHMCMHCNGRFLSSYMLQLHYKNQCKNSKKRHFCRRCPLRFMWKNNMKTHIVMEHGQEIDLNRRHECFLCQEKFTFQKELKRHLTNDHSADAALHYCLLCPKTFFNIEHLNEHLGGHRLTTADVTTVESVIHSTCWPNGEKTIKCKICGLIFDTMANLREHFSPKNPQNVCANQHSLSNYSITNQKGFELHLELDSETEIEDESETAAAANKGNKRPMYPYNCCMCSMSFKRKYRMAQHQRSMHNYEVLELKCERCIFRTVSQKVLDYHKATQCFNSEKQYECIHCNFKFMWEENLNSHIATFHTPKDLPRETDIVKMVTAIEPIPANSKSETNIFECMDCHRRYNRKDRYKAHFKKFHSNDLQLRTDSKVFATRPRKQPSKSLEKKFLCAFCGLSFANNSNLTVHMRRHTGEKPFKCDLCEMAFPRTSDLQAHRRTHTGERPFKCEYCDKSFSRQYKLNVHNRIHTGERPYQCTFCEKSFIQSNDLTLHLRRHTGERPYMCDICGEGFICATSLKQHRTSRGHHEEKIDLKMLAQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00331663; iTF_01194561; iTF_01261184; iTF_00259079; iTF_00259946; iTF_00200054; iTF_00350324;
90% Identity: iTF_01261184;
80% Identity: -