Basic Information

Insect: Calliphora vomitoria
Gene Symbol: -
Assembly: GCA_942486075.2
Location: CALNXM020000007.1:2588266-2595194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.14 6.8 7.6 1.3 1 23 255 278 255 278 0.91

2 25 2.9e-05 0.0014 19.2 1.1 1 23 284 307 284 307 0.97

3 25 0.004 0.19 12.4 1.1 2 23 337 358 336 358 0.96

4 25 0.0015 0.072 13.8 1.2 1 23 435 458 435 458 0.96

5 25 0.35 17 6.3 0.2 2 23 466 487 465 487 0.96

6 25 0.0037 0.18 12.5 0.8 2 23 533 554 532 554 0.96

7 25 0.079 3.9 8.4 1.8 2 20 567 585 566 588 0.94

8 25 0.0054 0.27 12.0 2.2 1 23 667 690 667 690 0.94

9 25 0.0026 0.13 13.0 0.2 1 21 697 717 697 718 0.95

10 25 0.13 6.4 7.7 0.8 2 23 730 752 729 752 0.94

11 25 0.00043 0.021 15.5 0.4 2 23 767 788 766 788 0.97

12 25 1.1e-06 5.3e-05 23.7 3.7 1 23 794 816 794 816 0.98

13 25 1.2 59 4.6 1.9 1 23 960 984 960 984 0.96

14 25 8.4 4.1e+02 2.0 1.3 1 23 1021 1044 1021 1044 0.92

15 25 0.0026 0.13 13.0 2.4 1 23 1054 1077 1054 1077 0.97

16 25 0.011 0.54 11.0 3.6 1 23 1084 1106 1084 1106 0.97

17 25 0.013 0.66 10.8 0.1 2 19 1133 1150 1132 1152 0.94

18 25 0.002 0.098 13.4 5.0 1 23 1208 1231 1208 1231 0.97

19 25 0.12 5.7 7.8 0.3 1 23 1268 1291 1268 1291 0.95

20 25 0.079 3.9 8.3 6.2 1 23 1323 1346 1323 1346 0.97

21 25 7.3e-07 3.6e-05 24.2 0.8 2 23 1374 1395 1373 1395 0.95

22 25 1.3e-05 0.00061 20.3 0.8 1 23 1401 1423 1401 1423 0.99

23 25 7.2e-05 0.0036 17.9 3.0 1 23 1429 1451 1429 1451 0.98

24 25 6.4e-06 0.00031 21.2 2.3 1 23 1457 1479 1457 1479 0.99

25 25 0.031 1.5 9.6 0.7 1 22 1485 1506 1485 1509 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.14	6.8	7.6	1.3	1	23	255	278	255	278	0.91
2	25	2.9e-05	0.0014	19.2	1.1	1	23	284	307	284	307	0.97
3	25	0.004	0.19	12.4	1.1	2	23	337	358	336	358	0.96
4	25	0.0015	0.072	13.8	1.2	1	23	435	458	435	458	0.96
5	25	0.35	17	6.3	0.2	2	23	466	487	465	487	0.96
6	25	0.0037	0.18	12.5	0.8	2	23	533	554	532	554	0.96
7	25	0.079	3.9	8.4	1.8	2	20	567	585	566	588	0.94
8	25	0.0054	0.27	12.0	2.2	1	23	667	690	667	690	0.94
9	25	0.0026	0.13	13.0	0.2	1	21	697	717	697	718	0.95
10	25	0.13	6.4	7.7	0.8	2	23	730	752	729	752	0.94
11	25	0.00043	0.021	15.5	0.4	2	23	767	788	766	788	0.97
12	25	1.1e-06	5.3e-05	23.7	3.7	1	23	794	816	794	816	0.98
13	25	1.2	59	4.6	1.9	1	23	960	984	960	984	0.96
14	25	8.4	4.1e+02	2.0	1.3	1	23	1021	1044	1021	1044	0.92
15	25	0.0026	0.13	13.0	2.4	1	23	1054	1077	1054	1077	0.97
16	25	0.011	0.54	11.0	3.6	1	23	1084	1106	1084	1106	0.97
17	25	0.013	0.66	10.8	0.1	2	19	1133	1150	1132	1152	0.94
18	25	0.002	0.098	13.4	5.0	1	23	1208	1231	1208	1231	0.97
19	25	0.12	5.7	7.8	0.3	1	23	1268	1291	1268	1291	0.95
20	25	0.079	3.9	8.3	6.2	1	23	1323	1346	1323	1346	0.97
21	25	7.3e-07	3.6e-05	24.2	0.8	2	23	1374	1395	1373	1395	0.95
22	25	1.3e-05	0.00061	20.3	0.8	1	23	1401	1423	1401	1423	0.99
23	25	7.2e-05	0.0036	17.9	3.0	1	23	1429	1451	1429	1451	0.98
24	25	6.4e-06	0.00031	21.2	2.3	1	23	1457	1479	1457	1479	0.99
25	25	0.031	1.5	9.6	0.7	1	22	1485	1506	1485	1509	0.90

Sequence Information

Coding Sequence: ATGTCCAGTAATGTTAAAAACGAATGTTTTATAAATGGAGTACGCTACAAATGTCGTACTTGCTTTGACCCGGGACGAACAGTCTACTCCCTTGGAGATGACGCCTGCAATACAAAAACTTGGCGTGATTTATTAAATGATATTACTCAGTCTCAGACGAACGATGAAGATTTGCTCCCTAATACAATGTGCTGCAAATGCTCTGGAAAACTTAAAAGTTCCTATGATTTTATTGTTCAGATTCATAATGTGAATAAAAAATACTCCCAATTATTGGCTTGCAATGATCCACTCCAGGAGATTGATAATTTTACCGACTGTTTGGCAGAATCAACTATTGATTTGCCATTGGAGCAGTATATACCGGAAATTAAACTCGAGGAAGATCTCGTTGATCCATATAATAATGATTTAAGTAACAAAGTACCCGACAGTAAATCAAAATTGGAAAGTGAAGGTTCTCATGATTCCTTGAGGGAATGTTTTAATGATGAACTCAACTCAACACCAGACCATTTAGGACAGCAAAAAAGGAATAATTTAAAAACCAGGCACGACAGTTTAGACGATGACAACGACAATGATGATTATAGAAATGAATCCAGCTCTACATCGTCGGATGAAAGTGACTATGTGCCTTTGAAAAAATTTAAGAAAGAAAAGCCGAATAATAGCAGTTGCAGTAGCGGTCAACCGGTCAAACGGAAAAAAGGTCGGAAAGCCCCTGATTATTATGATAAAATTGAAAAGGTTAATGATCGTTTCGTATGCCTCATTTGCCAAAAAACATTTTCTCTACGAAAAGATTGTGGCCGACATATAGCTTCGATACACTTGCGACAAACAATGTTTCCCTGTGAATTTTGTGGACAAAGCTTTAGTCGTAAGGACAAGATACAACAGCACATTAAGCGCATGCATACAGACGGTGTAGTGTATCCGGCTAAACATAAAGAATGGCTATTTGGAGATCGTTTGTACAGTAAGCCTATTGCGTGGCATCTAGTAGAGTGTAAATTGTGTGATACAAAATTTCAAACAACTAAAGAACTTCGTCAACACCTAGAGAACCACAGTGATGTTGATACACTTCATAGCTTAGAATTAAGTGATAATATTATCCAACATTTGTTTCCAAATATGATTGATTTAAATATGGTGAAGGAAAGTATATGCAATGATATTCGCGAGAAACAATGGTTCAAATATTACACAGTGTTAAATGAACACTCTTACGAAATGTCTGTTAGTGATACGGAAGCCGAAGATTTAGAAGAAGACACTGTAGAGAGTGTCAGCAAATACAAGTGTGATTTGTGTGCTAAAGTGTTTTCATTTAAATACCAAGTTTTTTCTCATTTAAAAGAGGTTCATGGTAAGGACGAAATACCTTTGAAATGTGGACTATGTAAATTGGAGTTTATTTCCATAAAAATGTACGAACAGCATGCAAAAATTCACTGCCGTAATAGGCATAAGGTTTTGCTTTGCGCACATTGTCCCGCTAAGTTTGTTTGGCCTGAAAATATGAAAAATCACAATTGTGCCGCCAAAATACTGGCGACCCCACCGGTTGTTGCTACAAAAGATCAACTAATATGTAATGTATGTGATCGTAAATTTGAAGTAAAGACTAAATACCTAAAGCACTTGGATACACATAGTGATGGCAGAACTGTATCTTCAAAAACTATAATACGTTGTGGTCTTTGTGCACATTCTTTCGATAAATTACGACATTTGCGCAGACACATGCCTTTGCATGCGGATGGCAAAACTGGCATTGATTTTATTGGCAGTATTTATATAAAACGATTTGAACGTGCGAAATCAATTGATTATGCACTACTGCAGCAGGAAATACAAAATGCGTATAGTAAATCTCAAATTAGTCGGTTTTATCGCGCCATCGATAAGGACGGCAACGAATTGGACATTTTAGATTCGGATAGTGGAGAAGAGGAAACGGACGCTGATGGTGAAAATGTAAAAAAAGAATACGCCTGCGAACTTTGCAAAGAAGTGTTTAAAAAACGAAAACTTCTCTTAAACCATCAACATGAACGGCACAATGATGTGCCATTGCCCTTCCCGTGTAAGGACTGCACACAGCAATATGTTAGTAATGATTTGTTACAACAACATTTAATGAGGGATTGCTGGAATGAACATCGACGAATAGCTCAACAATGTGATCATTGTAATGCTCGTTTTATATGGCCTAATAATCTGTTGAAACATAAAGAAATTCAGCATAAAAATCAAAAGTATTCAAGACCTCAAAGGGCCAGCACTCTCAAGTGTGAGTACTGCGAAAAGGTATTTATATGGCCCAAGGATTTAGTGCGACATAGGAAAACTCACACTGAAGGAAAAAAATTCACGTGTCCACACTGTGATCGTAAATTTCACCGCAAAGACAATTTGCTGGCTCACATACGAATACATTGTCCTGATGGTATTCCCACAGTCTCAAATCCCGGTAAAAGTATCGACTACATACTGCCACATTTAATAAAACCTCACGGCTGCAAACGCATAAAATGCATGATCTGCTTTTCCGAACACAATCGCATACGCGACTTAAGGTCCCACTTACGTACACATCGCTATTCGGTTAATTTCGATAAAAGAAAAGAAATTGAAACTTTTGACGTAATATCATCTCAGCTCTATCCCGATGAACCGGTATCTTTGTCAGAAGAGGAACTAGTGAAACGCATTGGTTCTGATATTGTGGCGGAAAACTATTTGGAACGTTTTTACTCCATAACAAGTGAGAATGGTTGCGAAGTTAGTTTAGATAGTTCTGAAACTGAAAGCGATTCGGATGATAACGAAAGCGGTGATGAAGGCGACAGAAAATCAAAACGTGTTTACAAGTGCGATTTATGTCCTCAATTGAGTTTTAATCGTAAATATAGAATTTTCGATCATCAAAATAAACAACATAAGTGGGAGGAAGCCCGCCACATTTGTATACACTGCAATGGGCGATTTCTTTCATCATATTTGCTACAATTACACTATAAGAATCAATGTAAAAATTCAAAAAAACGACACTTTTGTCGACGTTGTCCCTTGCGTTTTATGTGGAAAAATAATATGAAGGCCCATATTGTAATGGAGCATGGACAAGAGATCGAATTAAATCACCGCCATGAATGTTTTCTATGCCAAGAAAAGTTCTCCATTCAAAAGGAACTCAAACGTCATTTGATCACTCAACATTCCGCCGATGCTGCACTTCATTATTGTCTGCTATGCCCTAAGACATTCTTCAGTATTGAACATCTCAATGAACATTTAAGTCGCCATCGATTGACAACAGCCGATGTCAAGACCGTTGAAAGTATAATACATTCCACCTGCTGGCCAAATGGTGAAAAGGCAATTAAATGCAAAATATGTGGCTTAATATTTCAAACTATGAGCAACTTAAGTGAACATTTCTCACCAAGAAATCCTCAAAACTTGTGTGCCAACCAACATTCATTGGCAAACTACTCAATTACTAATCAAAAAGGATTCGAGCTGCATTTAGAACTGGATTCTGAAACAGAAGTAGAAGATGAAGTTGAGACGGGACATACTAAAGACAGTAAAAGATCTTTATATCCCTACAATTGCTGCATGTGTAGTATGTCATTTAAGCGAAAATATCAAATGGCTCAACATCAGCGTTCTATGCACAATTATGAAGTGCTGGAGCTTAAATGTGAACGTTGTATTTTCCGAACAGTCTCACAGaaagttctagactatcataaagccacacagtgctttaatattgaaaagcaatacgaatgcgaacagtgtaattttaaatttatgtggcaagaaaatcttgataaccatattgccatatttcatactcccaatgatttggcgaaaccaacgaacctcattaaagcggcggcttctaatgagcctataccaaccaacaataaAAGCGATAACAATATTTTCGAATGTATGGACTGTCACCGAAGATACAATCGAAAAGATCGTTATAAAGCTCATTTTAAAAAGTTCCACAATGATTTGGAACcaacgtcggtcaacatttccaagtcaaaagttcgcaaacatcccacaccgaagacggaaaagaaatttttatgcgccttttgtggtctctccttttctaacaattctaatcttacggtgcacatgagaaggcacacgggagagaaaccattcaagtgtgatctttgtgaaatggcttttccacgtacatccgatttacagactcaccgacgtacacacaccggagaacgtcccttcaaatgtatgttttgcgagaaatcattttcgcgtcaatacaaattaaatgttcacaatcgtatacacaccggtgagcgtccctaccagtgcacgttttgtcaaaaatcatttattcaatcgaacgatttaacactacatttacgtcgccatacaggcgaaagaccatatatgtgtgacatttgcggcgagggctttatatgtgccacatctctaaagcagcaccgtaactcgaaaggtcatcaggaagaaaaaatcgatttaaaaatgtgtgtgcaacagttgacgcaattcgatatgaaattctaa
Protein Sequence: MSSNVKNECFINGVRYKCRTCFDPGRTVYSLGDDACNTKTWRDLLNDITQSQTNDEDLLPNTMCCKCSGKLKSSYDFIVQIHNVNKKYSQLLACNDPLQEIDNFTDCLAESTIDLPLEQYIPEIKLEEDLVDPYNNDLSNKVPDSKSKLESEGSHDSLRECFNDELNSTPDHLGQQKRNNLKTRHDSLDDDNDNDDYRNESSSTSSDESDYVPLKKFKKEKPNNSSCSSGQPVKRKKGRKAPDYYDKIEKVNDRFVCLICQKTFSLRKDCGRHIASIHLRQTMFPCEFCGQSFSRKDKIQQHIKRMHTDGVVYPAKHKEWLFGDRLYSKPIAWHLVECKLCDTKFQTTKELRQHLENHSDVDTLHSLELSDNIIQHLFPNMIDLNMVKESICNDIREKQWFKYYTVLNEHSYEMSVSDTEAEDLEEDTVESVSKYKCDLCAKVFSFKYQVFSHLKEVHGKDEIPLKCGLCKLEFISIKMYEQHAKIHCRNRHKVLLCAHCPAKFVWPENMKNHNCAAKILATPPVVATKDQLICNVCDRKFEVKTKYLKHLDTHSDGRTVSSKTIIRCGLCAHSFDKLRHLRRHMPLHADGKTGIDFIGSIYIKRFERAKSIDYALLQQEIQNAYSKSQISRFYRAIDKDGNELDILDSDSGEEETDADGENVKKEYACELCKEVFKKRKLLLNHQHERHNDVPLPFPCKDCTQQYVSNDLLQQHLMRDCWNEHRRIAQQCDHCNARFIWPNNLLKHKEIQHKNQKYSRPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRKFHRKDNLLAHIRIHCPDGIPTVSNPGKSIDYILPHLIKPHGCKRIKCMICFSEHNRIRDLRSHLRTHRYSVNFDKRKEIETFDVISSQLYPDEPVSLSEEELVKRIGSDIVAENYLERFYSITSENGCEVSLDSSETESDSDDNESGDEGDRKSKRVYKCDLCPQLSFNRKYRIFDHQNKQHKWEEARHICIHCNGRFLSSYLLQLHYKNQCKNSKKRHFCRRCPLRFMWKNNMKAHIVMEHGQEIELNHRHECFLCQEKFSIQKELKRHLITQHSADAALHYCLLCPKTFFSIEHLNEHLSRHRLTTADVKTVESIIHSTCWPNGEKAIKCKICGLIFQTMSNLSEHFSPRNPQNLCANQHSLANYSITNQKGFELHLELDSETEVEDEVETGHTKDSKRSLYPYNCCMCSMSFKRKYQMAQHQRSMHNYEVLELKCERCIFRTVSQKVLDYHKATQCFNIEKQYECEQCNFKFMWQENLDNHIAIFHTPNDLAKPTNLIKAAASNEPIPTNNKSDNNIFECMDCHRRYNRKDRYKAHFKKFHNDLEPTSVNISKSKVRKHPTPKTEKKFLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCEMAFPRTSDLQTHRRTHTGERPFKCMFCEKSFSRQYKLNVHNRIHTGERPYQCTFCQKSFIQSNDLTLHLRRHTGERPYMCDICGEGFICATSLKQHRNSKGHQEEKIDLKMCVQQLTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259362;
90% Identity: iTF_00259079;
80% Identity: -