Pter028137.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Protophormia terraenovae
Gene Symbol
-
Assembly
GCA_951394005.1
Location
OX596076.1:130954779-130963382[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.28 27 6.6 1.2 1 23 247 270 247 270 0.90
2 24 2.8e-05 0.0026 19.2 1.1 1 23 276 299 276 299 0.97
3 24 0.003 0.29 12.8 1.1 2 23 329 350 328 350 0.96
4 24 0.0044 0.42 12.2 1.4 1 23 430 453 430 453 0.96
5 24 0.29 27 6.5 0.6 2 23 461 482 460 482 0.97
6 24 0.0037 0.35 12.5 0.8 3 23 528 548 526 548 0.96
7 24 0.016 1.5 10.5 0.3 2 20 561 579 560 582 0.93
8 24 0.00014 0.014 16.9 3.6 1 23 664 686 664 687 0.96
9 24 0.0014 0.14 13.8 0.5 1 21 694 714 694 715 0.95
10 24 0.033 3.1 9.5 1.2 1 23 726 749 726 749 0.94
11 24 0.00042 0.04 15.5 0.4 2 23 764 785 763 785 0.97
12 24 2e-06 0.00019 22.8 1.1 1 23 791 813 791 813 0.97
13 24 0.014 1.4 10.6 2.0 1 23 962 986 962 986 0.97
14 24 0.0058 0.55 11.9 3.7 1 23 1056 1079 1056 1079 0.94
15 24 0.091 8.6 8.1 1.4 1 23 1086 1108 1086 1108 0.92
16 24 0.0026 0.25 13.0 0.1 2 19 1135 1152 1134 1154 0.95
17 24 0.024 2.2 10.0 5.3 1 23 1210 1233 1210 1233 0.97
18 24 1.4 1.3e+02 4.4 1.2 1 23 1270 1293 1270 1293 0.95
19 24 0.077 7.3 8.3 6.2 1 23 1325 1348 1325 1348 0.97
20 24 3.5e-06 0.00033 22.0 0.3 2 23 1378 1399 1377 1399 0.95
21 24 1.7e-05 0.0016 19.8 0.4 1 23 1405 1427 1405 1427 0.99
22 24 8.1e-07 7.7e-05 24.0 2.6 1 23 1433 1455 1433 1455 0.98
23 24 5.8e-06 0.00055 21.3 1.8 1 23 1461 1483 1461 1483 0.99
24 24 0.065 6.2 8.6 0.7 1 22 1489 1510 1489 1513 0.90

Sequence Information

Coding Sequence
ATGTCGAGCGATATTAAAAGTGAATGCATTATAAATGGGGTACGTTATAAATGTCGTACTTGCTTTGACCCAGGACGTTCAGTCTACTCCTTATCGGATGAGGCCAGCCACACAAAAACATGGGGTGACTTATTAGAAGATATTGCTAAGTTGCAGACAAACAACGAGAATTTACTCCCAAGGACTATGTGCTGCAAGTGTTCGGGAAAACTTAAAAGTTCATATGATTTTATACTTCAGATACATAATGTGAATAAAAAATACCTTGAACTATTGTCAAGCGCTGATGATCCACTACAGGAAATTGACAATTTTACCGATTGCTTAGCAGAGACGACAATTGATTTGCCATTAGAGATAAAATTAGAAGAAGAATTGGTTGAACCATTGAACACTGATTTAACCAACAAAGTTGCAAAtcacaataaaacaaaatcggAAAGTGAAgACGCTCATGATTCCTTAATGGATGCATTTAATAAGGATTTGAAGTCTACTTTTGAGCAATTGGAAGAAAACGAAagGCGCCACCTAAGTTTAGACGATGACAATGACGATAATGATTACAAAAATGAATCTAGTTCTACATCATCTGATGAAAGCGATGATTATGTGCCTCTCAAAAAGTTGAAGAAAGAGAATAGCCGTAACCTTAGCACTAGCAGTCAGCCAGTGAAGCGTAGAAAAGGTCGACAAGCCCCAGACTATTATGATAAAATTGAAAAGGTTAACGATCGCTTTGCTTGTCTCATTTGTCaaaagacattttctttgcGAAAAGATTGCGGTCGTCACATAGCATCGATACACTTGCGTCATACCATGTTTCCATGCGAATTTTGTGGACAAAGTTTTAGCCGCAAAGACAAGATACAACAACACATTAAGCGCATGCATTCAGATATAACAGTGTATCCAGCTAAACATAAAGAATGGTTATTTGGAGATCGTTTATATAGTAAACCGATCGCTTGGCAACTTGTTGAATGTAAATTATGTGATTCAAAATTTACAACAACTAAAGACCTGCGTCAACACTTGGAAAATCACAGTGATATAGACACGCTGCATCACTTAGAATTAAGCGATAACATTATCCAACATTTGTATCCAAATATGATTGATTTAGACTTTGTTAAAGGAAGTATATGCAAGGATATTATTGACAAGCATTGGTTTAAATATTACACAGTATTAAATGAACATTCATACGAAATGTCTATTAGTGACACTGAAGCGGAAGAtgtagaagaagaaaaagatgTATCAGCAGAGCGGGCCAACAAATACAAGTGTGATTTGTGTGCTCAAGTGTTTTCATACAAGTATCAAGTTTTCACTCATTTAAAAGAAACTCATGGCAATGATGAAATTCCTTTGAAATGTGGTCTCTGcaaattggaatttatttcaataaaaatgtaCGAACAACACTCAAAAACTCACTGTCGCAATAgacataaagttttactttgTGCTCATTGTCCGGCAAAGTTTGTTTGGccagaaaatatgaaaaatcacAATTGTGCAACCAAAATATCATTAAGTGCAAAGGCTACTTCTAAAGCTAAACTCGCATGTAATATATGTGAACGTAAATTTGAggtgaaaactaaatttttaaaacatttggaGACGCATAGAGATGGCAGATTGGTATCTTCCAAAACAATAATACGATGCGCACTTTGTCCACAATCCTTTGAAAAACTACGACAATTGCGTCAACATATGCCTCAGCATGCCGATGGTAAAACAGGCATTGACTTTAAACACAGTCTTTATGTGAAGCGTTTCGAACGTACAAAATCAATCGATTATGCACTGCTGCAGCAGGAAATACAAAATGCCTATAGAAAGTCACAAATAAGTCGTTTCTACCGAGCCATCGATAAGGATGGTAATGAGTTGGATATTTTAGATTCGGATAGTGATGTGGATGAGGAGGAGGAAGTGGAcgttaatggtgaaaatgttaaaaaggaATACACGTGTGAACTTTGCAGTGAAGTGTTTAAAAGACGAAAATATCTCTTAAAACATCAACAAGAACATCACAATGATGTGCCACTGCCCTTTAAGTGTAAGGACTGTACTCAACAATATGTGAGTAATGATTTGTTGCAACAACATTTGCTAAGGGATTGCTGGAATGAACACCGTCGTATAGCACATCAATGTGATTATTGTAATGCTCGTTTTGTATGGCCAAATAATCTATTTAAACATAAAGAAATTCagcataaaaatcaaaaacaaccaAAACCACAAAGAGCGAGTACTCTTAAGTGTGAATACTGTGAGAAGGTATTCATATGGCCTAAAGATTTAGTGCGCCATAGAAAGACTCATACTGAAGGTAAAAAATTCGCTTGTCCGCATTGTGAGCGTAAATTTCAGCGCAAGGATAATTTGTTGGCTCACATACGAATACATTGTCCTGATGGTATTCCCACAGTATCAAATCCTGGTAAAGGTATCAATTATATATTGCCGCATTTATTAAAACCACATGGGTGTAAACGTATCCAGTGCATGATTTGCTTTTCCGAACATAATCGCATTCGCGACTTAAGGTCCCACCTACGAACACATCGATTTTCGGTTAATTTtgataaaagaaaagaaaaggaAACATTTGATTCTATCTCATCTCAACTATATCCCGATGAAACGGTGCCTCTGACAGAAGAGGAAATTGTAAAACGTATTAGTGCTGATATCGCATCAGAAAACAATTTGGAACGTTTTTACTCTATAACAAGTGAAAACGGAAACGAAGTCAGTTTAGATAGTTCGGAAACAGAAAGCGATTCtgatgatgataataatgaAGAAAACGGCGATGAAAACGATGCAAATATTAAATCCAAGCGTGATTATAAATGTGATTTATGTCCTCAGTTGAGTTTTAATCGTAAATATAAACTTTTCGAACACCAGAATAAACTACATAAATGGGAGGAAGCTCGTCACATGTGTATACATTGTAATGGGCGATTTCTTTCGTCATATATGCTACAATTACACTATAAGAATCAatgtaaaaatagtaaaaaacgTCACTTTTGTCGTCGTTGTCCTTTGCGTTTTATGTGGAAAAATAATATGAAGACACATATTGTAATGGAACATGGTCAGGAGATCGATTTAAATCGTCGTCATGAATGTTTCCTATGCCAAGAAAAGTTCACCTTTCAAAAGGAACTAAAACGTCATTTGACCAATGATCATTCCGCCAATGCAGCACTCCATTATTGTCTCCTATGTCCCAAAACATTCTTTAATGTTGAACATCTTGATGAGCATTTGGGTGGTCATCGTTTGACAACAGCCGATGTCACGACCGTTGAAAGTATAATACATTCCACATGTTGGCCGAATGGggaaaaaacaattaaatgtaaaatatgcGGCCTAGTATTTGATACTATGGCCAACTTGAGGGAACATTTTTCACCTAAAAATCCCCAAAATATGTGTGCAAATCAACATTCATTGTCAAATTACTCGATAACGAATCAAAAGGGATTCGAATTACACTTAGAACTGGATTCTGAAACAGAAATAGAAGATGAACCAGAAGCGGGACctaacaaaagcaacaaaagaCCTATGTATCCCTATAACTGTTGCATGTGTAGTATGTCGTTTAAGCGAAAGTATCGAATGGCTCAACATCAACGTTCTATGCACAATTATGAAGTGCTAGAGCTAAAATGTGAACGATGTATTTTTAGGACAGTCTCACAGaaagtaTTAGATTATCATAAGGCCACACAGTGTTTTAATTCAGAAAAACAATATGAATGTATCCATTGCAATTTCAAATTTATGTGGGAAGAAAATCTTAATAATCATATTGCCACATTTCATTCTCCAAAAGATTTACCCAAGGAAGCAGACATCGTTAAGATGGTAACTGCTATTGAACCTATACCAGCTAACAGTAAAAGCGAAactaatatttttgaatgtatGGACTGTCACCGACGCTACAACCGTAAAGATCGCTATAAAgcacattttaaaaaatttcacagtAATGATTTGCAATTAAGAACAGATTCCAAGGTTTTCGCTACAAGACCTCGCAAACAGCCTTCCAAAAGTttggaaaagaaatttttatgtgCATTTTGTGGCCTGGCTTTTGCAAACAATTCTAATCTAACGGTACACATGAGACGACATACAGGCGAGAAACCCTTCAAGTGTGATCTTTGCGAAATGGCTTTTCCACGAACATCCGATTTGCAGGCTCATCGACGATCACATACCGGCGAACGTCCCTTTAAATGCGAGTATTGTGACAAATCATTTTCTCGGCAATACAAATTAAATGTTCACAATCGTATTCACACCGGCGAACGTCCCTATCAATGTACGTTTTGTGAGAAATCATTTATTCAATCGAATGATTTGACTTTACATTTGCGTCGCCATACAGGCGAAAGACCCTATATGTGTGACATTTGCGGTGAAGGTTTTATATGTGCCACATCACTGAAACAGCATCGTACTTCAAGGGGTCATCACGAAGAAAAAAtggatttaaaaatgttgacacAATTCGATATGAAGTTTTAA
Protein Sequence
MSSDIKSECIINGVRYKCRTCFDPGRSVYSLSDEASHTKTWGDLLEDIAKLQTNNENLLPRTMCCKCSGKLKSSYDFILQIHNVNKKYLELLSSADDPLQEIDNFTDCLAETTIDLPLEIKLEEELVEPLNTDLTNKVANHNKTKSESEDAHDSLMDAFNKDLKSTFEQLEENERRHLSLDDDNDDNDYKNESSSTSSDESDDYVPLKKLKKENSRNLSTSSQPVKRRKGRQAPDYYDKIEKVNDRFACLICQKTFSLRKDCGRHIASIHLRHTMFPCEFCGQSFSRKDKIQQHIKRMHSDITVYPAKHKEWLFGDRLYSKPIAWQLVECKLCDSKFTTTKDLRQHLENHSDIDTLHHLELSDNIIQHLYPNMIDLDFVKGSICKDIIDKHWFKYYTVLNEHSYEMSISDTEAEDVEEEKDVSAERANKYKCDLCAQVFSYKYQVFTHLKETHGNDEIPLKCGLCKLEFISIKMYEQHSKTHCRNRHKVLLCAHCPAKFVWPENMKNHNCATKISLSAKATSKAKLACNICERKFEVKTKFLKHLETHRDGRLVSSKTIIRCALCPQSFEKLRQLRQHMPQHADGKTGIDFKHSLYVKRFERTKSIDYALLQQEIQNAYRKSQISRFYRAIDKDGNELDILDSDSDVDEEEEVDVNGENVKKEYTCELCSEVFKRRKYLLKHQQEHHNDVPLPFKCKDCTQQYVSNDLLQQHLLRDCWNEHRRIAHQCDYCNARFVWPNNLFKHKEIQHKNQKQPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFACPHCERKFQRKDNLLAHIRIHCPDGIPTVSNPGKGINYILPHLLKPHGCKRIQCMICFSEHNRIRDLRSHLRTHRFSVNFDKRKEKETFDSISSQLYPDETVPLTEEEIVKRISADIASENNLERFYSITSENGNEVSLDSSETESDSDDDNNEENGDENDANIKSKRDYKCDLCPQLSFNRKYKLFEHQNKLHKWEEARHMCIHCNGRFLSSYMLQLHYKNQCKNSKKRHFCRRCPLRFMWKNNMKTHIVMEHGQEIDLNRRHECFLCQEKFTFQKELKRHLTNDHSANAALHYCLLCPKTFFNVEHLDEHLGGHRLTTADVTTVESIIHSTCWPNGEKTIKCKICGLVFDTMANLREHFSPKNPQNMCANQHSLSNYSITNQKGFELHLELDSETEIEDEPEAGPNKSNKRPMYPYNCCMCSMSFKRKYRMAQHQRSMHNYEVLELKCERCIFRTVSQKVLDYHKATQCFNSEKQYECIHCNFKFMWEENLNNHIATFHSPKDLPKEADIVKMVTAIEPIPANSKSETNIFECMDCHRRYNRKDRYKAHFKKFHSNDLQLRTDSKVFATRPRKQPSKSLEKKFLCAFCGLAFANNSNLTVHMRRHTGEKPFKCDLCEMAFPRTSDLQAHRRSHTGERPFKCEYCDKSFSRQYKLNVHNRIHTGERPYQCTFCEKSFIQSNDLTLHLRRHTGERPYMCDICGEGFICATSLKQHRTSRGHHEEKMDLKMLTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01259362;
90% Identity
iTF_01194561; iTF_01259362;
80% Identity
-