Basic Information

Insect: Polyergus mexicanus
Gene Symbol: -
Assembly: GCA_030449975.1
Location: JAUDSZ010000010.1:206551-211160[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.023 4.1 9.4 3.1 1 23 387 409 387 409 0.97

2 19 0.019 3.4 9.6 0.5 2 23 448 469 447 469 0.96

3 19 0.00032 0.056 15.2 0.8 1 23 540 562 540 562 0.93

4 19 0.095 17 7.4 2.9 1 23 565 587 565 587 0.98

5 19 3.3e-05 0.0057 18.3 1.6 2 23 647 669 646 669 0.96

6 19 7.2e-05 0.013 17.3 2.2 1 23 676 698 676 698 0.96

7 19 0.00076 0.13 14.0 0.7 1 20 704 723 704 728 0.94

8 19 6.4e-05 0.011 17.4 0.9 2 23 801 822 800 822 0.95

9 19 0.00027 0.048 15.4 4.0 1 23 873 895 873 895 0.96

10 19 0.00034 0.059 15.1 0.7 1 20 900 919 900 921 0.94

11 19 0.057 9.9 8.1 0.3 2 23 932 953 932 953 0.97

12 19 3.5e-05 0.006 18.3 0.6 2 23 992 1013 991 1013 0.97

13 19 3.1e-05 0.0055 18.4 1.6 1 23 1018 1040 1018 1040 0.95

14 19 0.00018 0.031 16.0 2.8 1 23 1046 1068 1046 1068 0.98

15 19 5.6e-06 0.00097 20.8 0.4 1 23 1084 1106 1084 1106 0.95

16 19 6.6e-07 0.00011 23.7 0.8 1 23 1112 1134 1112 1134 0.99

17 19 4.9e-05 0.0086 17.8 0.2 1 23 1140 1162 1140 1162 0.97

18 19 0.029 5.1 9.1 6.9 1 23 1168 1190 1168 1190 0.96

19 19 0.0062 1.1 11.2 0.6 1 20 1196 1215 1196 1217 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.023	4.1	9.4	3.1	1	23	387	409	387	409	0.97
2	19	0.019	3.4	9.6	0.5	2	23	448	469	447	469	0.96
3	19	0.00032	0.056	15.2	0.8	1	23	540	562	540	562	0.93
4	19	0.095	17	7.4	2.9	1	23	565	587	565	587	0.98
5	19	3.3e-05	0.0057	18.3	1.6	2	23	647	669	646	669	0.96
6	19	7.2e-05	0.013	17.3	2.2	1	23	676	698	676	698	0.96
7	19	0.00076	0.13	14.0	0.7	1	20	704	723	704	728	0.94
8	19	6.4e-05	0.011	17.4	0.9	2	23	801	822	800	822	0.95
9	19	0.00027	0.048	15.4	4.0	1	23	873	895	873	895	0.96
10	19	0.00034	0.059	15.1	0.7	1	20	900	919	900	921	0.94
11	19	0.057	9.9	8.1	0.3	2	23	932	953	932	953	0.97
12	19	3.5e-05	0.006	18.3	0.6	2	23	992	1013	991	1013	0.97
13	19	3.1e-05	0.0055	18.4	1.6	1	23	1018	1040	1018	1040	0.95
14	19	0.00018	0.031	16.0	2.8	1	23	1046	1068	1046	1068	0.98
15	19	5.6e-06	0.00097	20.8	0.4	1	23	1084	1106	1084	1106	0.95
16	19	6.6e-07	0.00011	23.7	0.8	1	23	1112	1134	1112	1134	0.99
17	19	4.9e-05	0.0086	17.8	0.2	1	23	1140	1162	1140	1162	0.97
18	19	0.029	5.1	9.1	6.9	1	23	1168	1190	1168	1190	0.96
19	19	0.0062	1.1	11.2	0.6	1	20	1196	1215	1196	1217	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTAGAAATAAATACGTCGGATCCGACGCGGAGCGAGGACGCGATCGCGTCCGCGGTGAAAATATGCCGCGTGTGCCTGCTCGACAATCCGATGATGCGAGATCTCTTCCTCGAGAGAGGGGTCGCGTCCCTCTCAATGAAAGCGATGAGCTTCACCAACGTTAAGATGTTACCAGACGACGGTCTACCGGCACAGGTGTGTTGTGTTTGTGCCGACAAATTAGAGTCGGCGTATGAATTTAAGTTACAAGTGGAGCAGGCTGACAGCGTCCTCAGAAATAGGTTCATCGGAGGGATAATAAAGGAGGAATTGTTTCTTAACGAAGTCGAGATACACTTAGATGACGAAAGGAACGATGATACGGACGACACGAATGTCAACACCGATTATGAGACTACTGTCGCAGTTCTACCGGAAGAGACAGACgttgataaaaactttttgaAAGAGCAATTAATGATCttggaaaatgaaaaattaacaaatgtaGAAGAAATGCAACAGAATGCGGAACAGGATAATTCGCAGGAAATTACACAACAAATTAGTCAAAGCGTCACAGAAGAGTCGCAGCAAGAATTAGTTGATACGGAAGATAATGATATACCAAGTACTATCGAAGAATCTAGGAATCGAAAGTCTTGTATGAAcgaaaatatcataaattcgAATTATATAGAGGCAATTCCAACGGAGGAACATGATTATATTATGCAGCAACAGTGCGCGTTGCCCGCTGAACAATTTCCTTTGCAGGGAAGGATACACATGAATATACAAATTGAACAAAGTATAGCGGAATGCCAACAAACATTATCTGAATTAGATCAAGAGAATCGAGTTGAACAAATTCAGGAGGATAAAGTGGAGCAAATTCAAGATGCTCAAGAGCGGCAAATTCAAGTGAATCAATCTGAGCAAAATCAAAGCGATGAAAAGAAATCTTTCAACGAAGAAATGTCTACTGAAACTGATAACGAGCCAGCGGTGGGACAAGACTCATCTCAAAACGAAACTAGAAGAAGTAAACGTAGATTAGCTCGTCGGACGTTCGCTGAACGGGATTCCGACCAAGAGAactatttcgaaaatttaaatctcAGTTCTCGATTGAAAAGAGCACAGGCGGATAAGGCGGAGAAGATTTTCTTTATGTGTTATTTGTGCGACAAACAATTCCTGTCAAAAAGCGTTCTGAAGGAGCACATGCATTCTCATGAAGAAGTGAGGAAAGCGCTCTCTCTAAAGAAAACGCCGGAGAAGCCGCAAAAGATACGGACCAACATCTCCACCATCACCACGAAGACTCCGCCATCTGGAAAAAAAGCCAACAAGTGCCCTTATTGCGGTAAAGAGTATTTGTACATAATTTCGTTTACCAAGCACATTAAACAGCACGAGCGGGAGCGAGAGGAGGCGAAAGAAGATCCTATGCCGCTCGAAATTTCGTTCCACGAAGATGAACATAGTCTAGACTTTGATGGTAATAATTTGGACAGAGAATATAGAAAACGAACGAGGAGAGGAAGTATAGGTGACGGAAACGACGATACCACGACGACCGACAACGATcaggataaaaaaagaaaacggaaTCGTGTCGAAGAATTCGCATGCGACAAATGTCCAGAGAAATTCGATACGAAGCGAAGCTTGCAAAAGCACTCGCTCGCGCACGTTAGCTTCAAATGCAACGTGTGTCACGATGAGTACGACACTCTGATACAACTCAAGAATCACCGAACGAAACATGTAGTCGAAGGCGTACTTACGGAGCAGGATTTAGAAGAAGACACGAAGCAGATGATGGCCAAGAGCGTCGAGAGCTACGATGACGAAGACAACAAGAACGAcgacgaggaggaggaggaggaggaggaggaggaagaataTAATGATGGCGAATCCGCCGAACATGCGAAGGAACTCAAGTGTCAAAAGTGCCCAATGACGTTCTCGCGCAAGAAATTGCTGTCGAGACACACGGAGACGGCGCATACACATGGAGCTAGCAGCTACGATTGCAAGATATGTCGTCAACAGTTCACGCGGAAGGATCTTCTGCGCAGACATACCGAGCAGCACGCGCGAACAAAGACCTACAAGTGTACTCAGTGCAACAAAACTTTTGGTAACGAGCTCACTCTAAGAAATCATCTGGTCGCCACGAATCACAAGACGTTTATACATGGACAAGAATACGATCCGAACAAGCGTATAAAGCGCGTGGCTGCGAAAGCAGCGCAAAAGATCATTGATAAGATCAAAACGGAGGACGGTTTGGAGGATTACGACGACGATAACGACAATGTCGATTACGACGCCAAATTGGACGGGCATTATTATCACCGTAAGCGCGACGCTACGCCAAAGAGTTATAAGAAGGAATTAGAATGCGCGACGTGTAATAAGAGGTACAGCTCGAAGCAAGCGTTGACGAAGCACATGGAACAGCATGTGAAAGACGAAAAAGCGGCGGAGAAGTTGAAAAGGGCCGCTTCAGATAGGAAGGAGACGCAGAAAACGAATAATACGACAGGCgataacgacgacgacgacgacgacgactcgGATTTCGAGAGCGGTCTCGATTGGCCGATGGACAGTCACGAATGCGGCACGTGCAAGAAACGCTACAGCACGAAGAAGTCGCTGCTGCGACACCAATTGTTGCACGAGGAACCGAACTTTGAATGCGACATTTGCAACGTCAAGTTCTATCGTAAGGACAAGCTAAAGGCGCACTATGACAAGTGCTCCGAGAAGAATCCCGATCAGGTGAGGAAGTGCAATATATGCGGCGACAGTTTCGAGAATAATGAGATCCTGCGGGAACACCGGGCCAAGCATGTCACCGAAGGTATCTTAACGGAAGAAGATTTGAGAGACATCGAGCCGAAACCCGAGGAGAAGAAACCGGGCGAGAAAATCGGCCGGAAGAGGAGAACCGATATCGTAGGCCTCGAGTGTACCGAGTGCAACAAACAGTACACCTCCAGGAAAGGTCTTTTACGGCATATTCAGGTACACGAGGGCAAGAAATACTTGTGCGACATATGCCCGAAGAAGTTCTATCGACGGGAACATCTCAAGATCCACGTGGCCAAGCACAATATGATAAAACCGTACAAATGCACCCGCTGCACCAAGCGCTTTATCAAGGAGGAGCAGCTCAATAATCATCTGTCCAAGCACGATCGTACTTTCAAGAAAAATAAGGAAACCGATAGTTCGAAGAGATTTCTCTGTGAGATCTGCAGCAAGAGTTTCACACAATCGACGACGTTGATAGCTCATCTGCGCGCGCACAACGGTATCAAACCGTACGTATGCCAGGTCTGCTCCAGACCGTTCACCACCAACGCCTACCTAAAGATGCATATGCGCACGCACACGCAAGAACGGCCATATATCTGTCAATACTGTTCGCGAGCGTTCGCGCGAGCCGACACCTTGGCGAATCATCTAACGTCTCACACCGGCGAGGCCAAGTATCACTGCAAATGCTGTCCGAAAAACTTCCGTCGATTGAAATCACTGAAGGAGCACATGTTTATTCATACGGGTCAGCGACCTTACGAATGTCCGACCTGCGACCGCAAGTTCAACAACAACGGCAGCCGCTACGCGCACAGTAAGCGTTGTAAACAAAATCTCTTGCAGAATCAGAATCGCGCGCAGCAGATGATGCAGCAGCAGGTGCAGTCACAGCCGCCGCAGCAACAGCAACAACAATCTCAAGTGCAGATACAAGTACAGCAGCAGTCACAGGTCAGGATGCATCAGACCACGCTCGGCCAGGCGCAGATCGTCAAAGCGCAGAACATCAAGACGATCGCTATAGCGAGGCAGGCGGAACCGACCACGGTGGCTACGACGCAGCAAGTGATGCAACAGGAGATATTGATGCCGCTCATTTTGCCGCTTACCGTCACCCTCGCCGACGTAGGCGAGGAGGTGATATTACCTGAgggtacaaaaatatttaccaCTTCTTAA
Protein Sequence: MDAVEINTSDPTRSEDAIASAVKICRVCLLDNPMMRDLFLERGVASLSMKAMSFTNVKMLPDDGLPAQVCCVCADKLESAYEFKLQVEQADSVLRNRFIGGIIKEELFLNEVEIHLDDERNDDTDDTNVNTDYETTVAVLPEETDVDKNFLKEQLMILENEKLTNVEEMQQNAEQDNSQEITQQISQSVTEESQQELVDTEDNDIPSTIEESRNRKSCMNENIINSNYIEAIPTEEHDYIMQQQCALPAEQFPLQGRIHMNIQIEQSIAECQQTLSELDQENRVEQIQEDKVEQIQDAQERQIQVNQSEQNQSDEKKSFNEEMSTETDNEPAVGQDSSQNETRRSKRRLARRTFAERDSDQENYFENLNLSSRLKRAQADKAEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKALSLKKTPEKPQKIRTNISTITTKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHEREREEAKEDPMPLEISFHEDEHSLDFDGNNLDREYRKRTRRGSIGDGNDDTTTTDNDQDKKRKRNRVEEFACDKCPEKFDTKRSLQKHSLAHVSFKCNVCHDEYDTLIQLKNHRTKHVVEGVLTEQDLEEDTKQMMAKSVESYDDEDNKNDDEEEEEEEEEEEYNDGESAEHAKELKCQKCPMTFSRKKLLSRHTETAHTHGASSYDCKICRQQFTRKDLLRRHTEQHARTKTYKCTQCNKTFGNELTLRNHLVATNHKTFIHGQEYDPNKRIKRVAAKAAQKIIDKIKTEDGLEDYDDDNDNVDYDAKLDGHYYHRKRDATPKSYKKELECATCNKRYSSKQALTKHMEQHVKDEKAAEKLKRAASDRKETQKTNNTTGDNDDDDDDDSDFESGLDWPMDSHECGTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDIEPKPEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLNNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCQVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQNQNRAQQMMQQQVQSQPPQQQQQQSQVQIQVQQQSQVRMHQTTLGQAQIVKAQNIKTIAIARQAEPTTVATTQQVMQQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867617; iTF_00729509; iTF_00730225; iTF_00730940; iTF_00280103; iTF_00280699; iTF_00265175; iTF_00109981; iTF_00264461; iTF_00869054;
90% Identity: iTF_00729509;
80% Identity: -