Basic Information

Gene Symbol
ZBTB47
Assembly
GCA_010416905.1
Location
QUOG01000028.1:1895432-1899719[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 4.8 3.4e+02 1.7 7.4 2 23 266 288 265 288 0.96
2 20 0.043 3 8.2 4.2 1 23 339 361 339 361 0.97
3 20 0.08 5.6 7.3 0.5 1 23 410 432 410 432 0.98
4 20 0.015 1 9.7 0.3 1 20 487 506 487 508 0.94
5 20 1.3 91 3.5 3.9 1 23 520 543 520 543 0.89
6 20 0.0011 0.079 13.2 2.4 1 23 548 570 548 570 0.97
7 20 8.5e-05 0.006 16.7 0.4 1 23 617 639 617 639 0.97
8 20 0.00063 0.044 14.0 0.1 1 23 645 667 645 667 0.97
9 20 2.5e-06 0.00017 21.5 0.4 2 23 711 733 711 733 0.95
10 20 0.049 3.4 8.0 1.1 1 23 740 763 740 763 0.92
11 20 0.00024 0.017 15.3 0.5 2 23 770 792 769 792 0.94
12 20 0.01 0.73 10.1 0.1 2 23 800 821 800 821 0.94
13 20 0.0094 0.66 10.3 0.1 1 20 881 900 881 900 0.97
14 20 0.0026 0.18 12.0 0.3 2 23 920 941 919 941 0.95
15 20 0.00012 0.0083 16.2 3.9 1 23 955 977 955 977 0.95
16 20 5e-05 0.0035 17.4 1.5 1 23 997 1020 997 1020 0.95
17 20 0.011 0.74 10.1 2.2 2 23 1073 1095 1072 1095 0.94
18 20 0.0035 0.25 11.6 0.4 2 21 1122 1141 1121 1144 0.88
19 20 9.6 6.8e+02 0.8 1.1 3 23 1182 1203 1180 1203 0.90
20 20 4.5 3.2e+02 1.8 2.2 2 23 1233 1255 1233 1255 0.92

Sequence Information

Coding Sequence
ATGGACGACGTTGAACTACTGAACGTTGAAAATGTGTGTAGATTGTGTCTAACTGTGGAGGAACCAAAATCCTCGATATTTCAGACGGAAGACTCTCCTTCTGCTGTACCATTAGTTACTAAAATACAAGCATGCTTATCGCTTCAGatTTTGTCTACGGATAAAGTATCCACATTGATATGCTCTTCTTGTATAGATAATGTAAATCAATGGTATAATTACAAAGAAGCTTGTTTTCATTCTCAAGATAAATTACAGAAATGGCTAGAAACTCATCCGCAGACAAATCCAGtgGTTGTAAATATAAAGGAAGAACCTATGGATATAGATTACTGCGAAGATAACACTAAAACATTTGAATCCAACAGCGAATCAAGTGCTCATGTAACAAATCATGCGAAGTCAGCgggaaaattttattctaaaagtGAAGCTCGGGCAGAAGGAGTACAAATCGACAAGACATATGGTTTAGGTAaagataagaatttaaaaacttCTCAGTCATCTTCATCGAAGAATGTCAACAAGGAAGAATGCAGACTAGATAAAGAATATTGTAATGTATTCATTAAAACTGAACCAGAGGATGATTACGATACAGATTGTACGATAGAAATAGAATCGGTAAGCGGTACCGAATTACTTTTAAATCCAATGGCAATTGCTAGTAAAGAGGAGAGAATTATGGAAGCTGATTCTACTCAAAAATCAAATGCGACTACTCCGAATAgtagaaagaagatgaaacgTGGTCCTCACACACATTTCCGAGGTACACGCGTTTATAAACAGAAATGTATGCATTGCCAGATAAATCTACATTCTAAGCATTCGTATATAAAACACATGGAAAGATTTCATAGCGAAGAttgcgaaaataaaaatttatctaagtcGACATCTGCCGATGAAGAAGAACTGATAGAAGACGTGGAAGATGAATTGACGAGTATGGAGAACGATGCACCATTGACGGAGGtgcaacaaaatataattagtcAATTGAAGACATTTTCCTGTTACTCGTGTCAACAGACTTTCAATGATAGAAAACATACACTTATTCATATTCGTCAACATATGCCAGACTTAAGGCCATACACTTGTATCGCATGTTTAACACAATTTCGTGATCGATCTATGTACAAACTACATTGTAGCGCATCCTTCGAATGTGCAATGAAAATTGCATTGGTTATACCTAAGGAAGGAAACGAAAAGTATTTCACTTGCAACATGTGTTTACGACCGATGgcaaatagaaaagaattattaagtCATTTGTCTAAACATTCAGATAAACAATATGAAGAAATGATGTCACCGATGAGATCGCCGCCCAAATTACAACCTATGACACCTTTACCAAGTCCAAAAAAGGACATTTTACCAAAATCACCTCAGATGAATAAAGTCCTTTTTGGACCTTACAAAAATGGTGATCCAGCGCATAATCATCCCTGCAATTTGTGCGGTATGATCTACAGATACAAGCCTAATATGTTAAGACATCATGTAATTTGCATCAGGCTATCGCCAGAATTAAGGACTTGTTACAGATGTGTACATTGTGGTATGACTTTCCtcgtttttaagaaatttcacAATCATATCACTATCGatcataagaaaaaagaattcgttTGTTTCGAATGTAACGCTAAGTTCAAATCCCCGAGTGATTACCTGACACATCACGAGAAGCATCGACAAATGGCCGTCAGTCAAAATCAGGAGGTTACTAGTAATCAGATAATGTCCCCTCATCGTGGGCAGAGTCCTTTAAAATCGTGGAGCGATAACGAGGAAGCTACGGTGTCAAGACGAAGCATGGAGGGTCAACGATACGTTTGTAATCTATGTGGTCAAGATTTTACAACGAGAGCCAAATTGGCCTCGCATAAGAATCTTCATctcaaagtaaaaatatattcttgcGTTATTTGCCGCAGTATGTTTAGCAGTGCTGGTGCTTTAGAAATCCATATGAAGGATCATGGCATCGAAGATCCGCAAGAAAGAAATGCTAATAGTTCTTGCGTCGAATATGATCGACTCGACAATAGACCGCAAGAAATTGATACTCTTAACACGAGTTCTGTCTCGGACACTGGTGGACGAGAAAATGTATGTAACATATGCGGAAAGATATTCTCCAATTATCCAAATTTGAGAAGacattttagaaatattcacAAGGATAACAAAGCACGTTTTACTTGTATACGTTGCTCGTTatcttttaaaacaaaagagCTTTATGAAAATCACGTGAAGCTCGATCACAAAACAAAAGTCATGCTGATGTGCAGCCAGTGTCCCAAGACATTTAGCTTTAAAGCTAATTTGGATCTTCATTATAGTAGTGCTCACGGAGATAAACCCGGGAATCGAGAATGCGATATATGTGGAAAAGTCTTTTTGGAAGAAGCCTCCTTGAAGATTCATCGAAGCTGGCACAATCGAGCGAATTCGCGGTTTTACACTCGATCATTTTTAAGCGATGAGATCAAACCTATAACTTCGCTTTCTCCTACcgaaattaatgataataatttagttGTTTCGTCGCCCGAACGTCCAGCTAGGGCAAGAAAATCTTTTCCCAATCCACCACCTACAAAGCCGCAAAACGATTACCAGTGTCAAGTATGTGACAGTAAATTCGAAGATGTAGTCGAATTGAGGAAACATTTGTGGGATGTTCACTGTGCTCGTAATAAACCAGAGAGAAGTTTCTCAGGTGATGAACTTCAATGTCAGTTATGTACCAATATTTTTCCCGATCAAAAAAGTCTAAAGTTACATATGGATTGGCACAAAGCCAATCCAATATTGAGCAATATACAAAAGCAAACTTTCCTTTGCGAGATATGTAACAAACATTACAGCTCAAAGAAAGCTTTGACGAAACACAGAAAGCTTCACAAAGCAAACACGGTAGCTTCAATTAAGTTCCAATCGCTTAGTAGAAAGAGCGCTCAATATCTCTGCGACGTCTGTCGAAAGATCTTCAGCAGCAATCAATCATTGCAACGACATAGAATGTCTTTTCACAACGATTTACAGTCTCCTCGGTCTCAAGCATTTAGTAGTAGTACTCGAAGAGTATCCAGTGAGGAAtacaaaatgaagaaaatggatatggaagtaaaagaagaatcttCAAAAGAATTTACTTTGAATACAGTCAATGCTAGTAAGAAACCGGTTACTTGTCATTCGTGTAAAAAGACATTCCCAAACATGAGTGTTTTATACAAACACAAACAACTGATTCATAAACCGAGAATAACAAAAGTGATCGGTAAAACCCCAATAAATGAATGTGTTCCTATACAAAATGCTGACGGTAGAATTTCGTGCAATATATGCGGTAAACAGTTTTGGTCGATGTCAAATTTGAAACAACATTTTGCCGCGAAGCATAGAAACAATCCAAAAAGTCGTTGTACCACGGCTAGCTGTAATCCTACATATTCGCTTCTATCGCAGTCAATAAAGAGCGAATCTTTGCCACACAAAGCAACGATTATCTGTTGTAAACTTTGCAACCGTCATGTTTGGAGTAGAGAAGAGATAGCTATTCATATGCTTTCCGTACACGGTACAGCTTATGAACCTGATACCAACAGTAATTTCCACAGAGAAACCGATCTTACCACTTATGTTGTTGAAGGAGCGGTTAATGCGACTTGTCCTTGTTGCAATATCAAGTATCCTAACAATAGAGCTATGAAGATTCATTACTTTAAATTCCACGAAGCTACGGACTAA
Protein Sequence
MDDVELLNVENVCRLCLTVEEPKSSIFQTEDSPSAVPLVTKIQACLSLQILSTDKVSTLICSSCIDNVNQWYNYKEACFHSQDKLQKWLETHPQTNPVVVNIKEEPMDIDYCEDNTKTFESNSESSAHVTNHAKSAGKFYSKSEARAEGVQIDKTYGLGKDKNLKTSQSSSSKNVNKEECRLDKEYCNVFIKTEPEDDYDTDCTIEIESVSGTELLLNPMAIASKEERIMEADSTQKSNATTPNSRKKMKRGPHTHFRGTRVYKQKCMHCQINLHSKHSYIKHMERFHSEDCENKNLSKSTSADEEELIEDVEDELTSMENDAPLTEVQQNIISQLKTFSCYSCQQTFNDRKHTLIHIRQHMPDLRPYTCIACLTQFRDRSMYKLHCSASFECAMKIALVIPKEGNEKYFTCNMCLRPMANRKELLSHLSKHSDKQYEEMMSPMRSPPKLQPMTPLPSPKKDILPKSPQMNKVLFGPYKNGDPAHNHPCNLCGMIYRYKPNMLRHHVICIRLSPELRTCYRCVHCGMTFLVFKKFHNHITIDHKKKEFVCFECNAKFKSPSDYLTHHEKHRQMAVSQNQEVTSNQIMSPHRGQSPLKSWSDNEEATVSRRSMEGQRYVCNLCGQDFTTRAKLASHKNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPQERNANSSCVEYDRLDNRPQEIDTLNTSSVSDTGGRENVCNICGKIFSNYPNLRRHFRNIHKDNKARFTCIRCSLSFKTKELYENHVKLDHKTKVMLMCSQCPKTFSFKANLDLHYSSAHGDKPGNRECDICGKVFLEEASLKIHRSWHNRANSRFYTRSFLSDEIKPITSLSPTEINDNNLVVSSPERPARARKSFPNPPPTKPQNDYQCQVCDSKFEDVVELRKHLWDVHCARNKPERSFSGDELQCQLCTNIFPDQKSLKLHMDWHKANPILSNIQKQTFLCEICNKHYSSKKALTKHRKLHKANTVASIKFQSLSRKSAQYLCDVCRKIFSSNQSLQRHRMSFHNDLQSPRSQAFSSSTRRVSSEEYKMKKMDMEVKEESSKEFTLNTVNASKKPVTCHSCKKTFPNMSVLYKHKQLIHKPRITKVIGKTPINECVPIQNADGRISCNICGKQFWSMSNLKQHFAAKHRNNPKSRCTTASCNPTYSLLSQSIKSESLPHKATIICCKLCNRHVWSREEIAIHMLSVHGTAYEPDTNSNFHRETDLTTYVVEGAVNATCPCCNIKYPNNRAMKIHYFKFHEATD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2