Basic Information

Insect: Vespula pensylvanica
Gene Symbol: -
Assembly: GCA_014466175.1
Location: CM025337.1:10179104-10183505[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.18 11 6.2 6.3 2 23 266 288 265 288 0.97

2 18 0.0054 0.33 11.0 2.7 1 23 339 361 339 361 0.97

3 18 0.088 5.4 7.2 0.5 1 23 410 432 410 432 0.98

4 18 0.0055 0.33 11.0 0.1 1 20 487 506 487 508 0.93

5 18 0.0011 0.064 13.2 2.2 1 23 548 570 548 570 0.97

6 18 0.00011 0.0066 16.3 0.3 1 23 618 640 618 640 0.97

7 18 0.00061 0.037 14.0 0.1 1 23 646 668 646 668 0.97

8 18 8e-07 4.9e-05 23.0 0.5 2 23 712 734 712 734 0.95

9 18 0.017 1 9.4 1.1 1 23 741 764 741 764 0.92

10 18 0.0089 0.54 10.3 2.3 2 23 771 793 770 793 0.91

11 18 0.021 1.3 9.1 0.0 2 23 801 822 800 822 0.90

12 18 0.014 0.82 9.7 0.1 1 20 882 901 882 901 0.97

13 18 0.0018 0.11 12.4 0.4 2 23 921 942 920 942 0.95

14 18 7.1e-05 0.0043 16.9 2.8 1 23 956 978 956 978 0.97

15 18 2.6e-05 0.0016 18.3 2.8 1 23 998 1021 998 1021 0.96

16 18 0.008 0.49 10.4 1.4 2 23 1072 1094 1071 1094 0.94

17 18 0.00018 0.011 15.7 0.6 2 23 1121 1143 1120 1143 0.93

18 18 0.063 3.9 7.6 0.8 2 23 1232 1254 1232 1254 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.18	11	6.2	6.3	2	23	266	288	265	288	0.97
2	18	0.0054	0.33	11.0	2.7	1	23	339	361	339	361	0.97
3	18	0.088	5.4	7.2	0.5	1	23	410	432	410	432	0.98
4	18	0.0055	0.33	11.0	0.1	1	20	487	506	487	508	0.93
5	18	0.0011	0.064	13.2	2.2	1	23	548	570	548	570	0.97
6	18	0.00011	0.0066	16.3	0.3	1	23	618	640	618	640	0.97
7	18	0.00061	0.037	14.0	0.1	1	23	646	668	646	668	0.97
8	18	8e-07	4.9e-05	23.0	0.5	2	23	712	734	712	734	0.95
9	18	0.017	1	9.4	1.1	1	23	741	764	741	764	0.92
10	18	0.0089	0.54	10.3	2.3	2	23	771	793	770	793	0.91
11	18	0.021	1.3	9.1	0.0	2	23	801	822	800	822	0.90
12	18	0.014	0.82	9.7	0.1	1	20	882	901	882	901	0.97
13	18	0.0018	0.11	12.4	0.4	2	23	921	942	920	942	0.95
14	18	7.1e-05	0.0043	16.9	2.8	1	23	956	978	956	978	0.97
15	18	2.6e-05	0.0016	18.3	2.8	1	23	998	1021	998	1021	0.96
16	18	0.008	0.49	10.4	1.4	2	23	1072	1094	1071	1094	0.94
17	18	0.00018	0.011	15.7	0.6	2	23	1121	1143	1120	1143	0.93
18	18	0.063	3.9	7.6	0.8	2	23	1232	1254	1232	1254	0.94

Sequence Information

Coding Sequence: ATGGACGACATCGTTGAGCTATTGAACGTTGAAAACGTGTGCAGATTGTGTCTATCTGTCGAAGAACCGAAATCGTCGATCTTCGGGGCACAAGATTCCTCTGCTGCTGTACCACTCGTTACTAAAATACAGGCATGCCTATCACTTCAGATTTTATCTACCGACAAAGTGTCTACGTTGATATGTTCTTCATGCGTAAACAATGTAAATCAGTGGTACAACTACAAGGAAACTTGTTTTCGTTCTCAGGATAAGTTGCAGAAATGGCTAGAAACTCATCCACAGACAAACCCAGTGGTTGTAAATATAAAAGAGGAACCTATGGACATAGATTATTGCGAAGATAACGCTAAAATATCTGAATGCAACAATGAATCAAACTCTCGTGTAAATCATGTAAAGTCTGCAAGTAAACTTCATTCTAAAGATGAAGCTCGGACGGGAGAAGTACAAATTGACAAGACGCGTGACTTAGGTAAAGATAAGGAATTTAAAGCTTTTCAGTCAACTCCATTGAAGATGGCAGATAGGGAGGAGCATAGAATGGATAAACAATTTTATGGTGTATCGATAAAAACTGAGCCAGAAGATGATTATGATACGGATTGTACGATAGAAATAGAATCGGTCACTGGTAACGAATTACTATTGAATCCAATGGCGATTGCAGGTAAAGAGGACAGAATTATGGAAGCTGATTCGACTCAAAAATCAAATGCGGCTACTCCAAGCAGTAGAAAGAAGATGAAACGTGGTCCTCATACGCATTTCCGAGGTACTCGTGTTTATAAACAAAAGTGTACGCATTGTCAAATAAATTTACATTCTAAGTACACGTATATAAGACACATGCAAAGATTTCATAGTGACGAATGCGAAAATAAAGAGTTATCCAAGTCGATGTCTGCTGACGAAGAAGAATCGATCGAAGATGTGGAAGACGAATTAACGAGTATGGAGAACGATGCACCATTGACAGAGGTACAACAAAGTATAATCAGCCAATTGAAGACATTCTCGTGTTACTCGTGTCAGCAAACTTTTTCCGACAGAAGAAATACGCTTTCTCATATTCGTCAACACATGCCAGACTTAAGACCGTACACTTGTATCGCATGTTTAACGGAATTTCCTGATCGATCTATGTACAAATTGCACTGCAGTGCATCCTTCGAGTGTGCTATGAAAATTGCGTTGGTTATACCTAAGGAAGGGGAGGAAAAGTATTTCACTTGTAACATGTGTTTACGACCGATGCCAAACAGAAAAGAATTATTGAGTCATCTGTCGAAACATTCGGATAAGCAATACGAAGAAATGATGTCACCAATGAGATCTCCACCCAAGTTACAGCCTATGGCACCCTTGCCGTGCCCGAAGAAGGAAACGTTGCCGAAAACATCTCAGATGAATAGGGTCATTCTTGGACCTTATAAGAACGGCGATCCAGCGCATAATCACGCCTGCGATTTATGCGGCATGATTTACAGATACAAGCCTAATCTGTTGAAGCATCGTGTAATCTGTATCAGGTTGTCACCGGAAGTAAGAACTTGTTACAGATGCATTCATTGTGGTATGACTTATCTCGTCTTTAAAAAATTTCATAATCATATCACTATCGATCATAAGAAGAAAGAATTCGTTTGTTTCGAATGTAACGCCAAGTTCAGATCACCGAGTGATTATCTGACGCATCACGAGAAGCATCGACTGATGAACGTCGATCAACATCATCAGCAGGTTGCTAGTAATCAAATCATGTCGCCTCATCGTGGGCAGAGTCCTTTAAAATCGTGGAGTGATAACGAGGAAGCTACGGTATCGAGACGAAGCGTCGAGGGTCAACGATACGTTTGTAATCTTTGTGGTCAGGATTTTACTACGAGAGCCAAATTGGCTGAACATAAGAACCTTCATCTAAAAGTAAAGATATATTCGTGCGTTATTTGCCGTAGTATGTTTAGCAGCGCTGGTGCTTTAGAAATTCACATGAAAGATCACGGCATTGAAGATCCACAAGAAAGAAATGCCAATAGTTCTTGCGTCGAATACGAACGACTCGACGATAGTCCGCAAGGAATTAATTCTATTAACACAAGTGCGGTCTCAGATCCAGGCGAACGAAGAAACGAATGTAACATATGCGGAAAGGTATTCTCCAATTATCCGAATCTGAGAAGGCACTTTAGGAATATTCACAAGGACAGCAAAGCACGTTTCACTTGTATACGTTGCTCGTTATCCTTCAAAACTAAAGAGCTTTACGAACGTCATGCGAGACTCGATCACAAAACGAAAGTTATGTTAATGTGTCGTCAGTGTCCTAAAACGTTTACCTTCAAAGCTAATTTGGATCTCCATTGTAGGAGTGCTCACGGAGATAAATCTGGTAATCAAGAATGTGATATTTGTGGTAAAGTCTTTTTAGAGGAAGCCTCGTTAAAGATTCATCGAGGTTGGCACAACCGAGCAAATTCGCGTTTGTATACTCGGTCCTTCTTGAACAATGAGATTAAAGCTGCAACTTCGCTCTCTCCTGCCGAGGGCAGCGTCGGTAGTTTAGTCGTTACAACGCCCGAACGTCCAGCCAGGGCAAGAAAATCTTTTCCCAATCCACCACCTACGAAGCCACAGAACAATTACCAGTGTCAAGTATGCGACGGCAAATTCGAGGACGTGGTTGAGTTAAGGAAACATTTGTGGGACGTCCATTGTGCTCGTAACAAGCCAGAGAAAAGTTTTTCGGGTGACGAACTTCAATGTCAGTTATGTACCAATATTTTTCCTGATCAGAAGACCCTAAAAACACACATGGATTGGCACAAAGCGAATCCGATATTGAGCGATTTACAAAAGCAAACTTTCCCTTGCGAGATATGCGGCAAGCATTACAGTTCGAAGAAAGTCTTGACAAAACACAAGAAGCTTCACAAAGCGAACACGGTAGCTTCGATGAAGTTCCAATCTCTCGGTAGAAAGAACGCTCAATTCTTCTGCAACATCTGTCGAAAGATCTTCAGCAGCAATCAATCGTTGCAACGACATAGAATGTCTTTCCACAGCGATTTACAGACTAATCAAGCACAGAACAGTAGTACTCAGCGAATATCTAGCGAGGAATATAAATCAAAGAAAATTGATTTCGAATTAGAAGAGGATGTCGCGAAGGAATATACTTTGAATTTAACTAATGCCGGTAGGAAACCGGTTACTTGTCATTTGTGTAAGAAGATATTTCCGAACATGAGTGTTTTGTACAAACACAAACAATTGATTCACAAACCAAGAGTAGCAAAGGTGATCGGTAAACTATCGACGAACGAGTGCGTTCCTATACCAAGCGCTGACGGTCGAATTTCGTGCAATTTGTGTGGTAAACAGTTCTCGGCATTGTCAAATTTGAGACAACACTTCTCCGTGAAGCATAGAAACAATCCGAAAAGTCGTTGTACCACAGCCAGCTGTAACCCTACGTATTCGGTTCAATCGCAGTCTCTAAAGACCGAAAGTTTACCGCACAAAGCAATGATTCTCTGTTGCAAACTCTGCAATCGTCACGTTTGGAGCAGAGAAGAGATAGCTAATCACATGGTTTCTGTACATGGAACAGCTTATGAACCCGATAACAACAGTAATTTTCATAGGGAAACTGATCTTACCACTTACGTCGTCGAAGGTGCCGTTAATGCGACCTGTCCTCGTTGCAATATCAAATATCCTAACAATAGAGCTATGAAGATCCATTACTTTAAATTCCACGAAGCTACAGATTAA
Protein Sequence: MDDIVELLNVENVCRLCLSVEEPKSSIFGAQDSSAAVPLVTKIQACLSLQILSTDKVSTLICSSCVNNVNQWYNYKETCFRSQDKLQKWLETHPQTNPVVVNIKEEPMDIDYCEDNAKISECNNESNSRVNHVKSASKLHSKDEARTGEVQIDKTRDLGKDKEFKAFQSTPLKMADREEHRMDKQFYGVSIKTEPEDDYDTDCTIEIESVTGNELLLNPMAIAGKEDRIMEADSTQKSNAATPSSRKKMKRGPHTHFRGTRVYKQKCTHCQINLHSKYTYIRHMQRFHSDECENKELSKSMSADEEESIEDVEDELTSMENDAPLTEVQQSIISQLKTFSCYSCQQTFSDRRNTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCSASFECAMKIALVIPKEGEEKYFTCNMCLRPMPNRKELLSHLSKHSDKQYEEMMSPMRSPPKLQPMAPLPCPKKETLPKTSQMNRVILGPYKNGDPAHNHACDLCGMIYRYKPNLLKHRVICIRLSPEVRTCYRCIHCGMTYLVFKKFHNHITIDHKKKEFVCFECNAKFRSPSDYLTHHEKHRLMNVDQHHQQVASNQIMSPHRGQSPLKSWSDNEEATVSRRSVEGQRYVCNLCGQDFTTRAKLAEHKNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPQERNANSSCVEYERLDDSPQGINSINTSAVSDPGERRNECNICGKVFSNYPNLRRHFRNIHKDSKARFTCIRCSLSFKTKELYERHARLDHKTKVMLMCRQCPKTFTFKANLDLHCRSAHGDKSGNQECDICGKVFLEEASLKIHRGWHNRANSRLYTRSFLNNEIKAATSLSPAEGSVGSLVVTTPERPARARKSFPNPPPTKPQNNYQCQVCDGKFEDVVELRKHLWDVHCARNKPEKSFSGDELQCQLCTNIFPDQKTLKTHMDWHKANPILSDLQKQTFPCEICGKHYSSKKVLTKHKKLHKANTVASMKFQSLGRKNAQFFCNICRKIFSSNQSLQRHRMSFHSDLQTNQAQNSSTQRISSEEYKSKKIDFELEEDVAKEYTLNLTNAGRKPVTCHLCKKIFPNMSVLYKHKQLIHKPRVAKVIGKLSTNECVPIPSADGRISCNLCGKQFSALSNLRQHFSVKHRNNPKSRCTTASCNPTYSVQSQSLKTESLPHKAMILCCKLCNRHVWSREEIANHMVSVHGTAYEPDNNSNFHRETDLTTYVVEGAVNATCPRCNIKYPNNRAMKIHYFKFHEATD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233839;
90% Identity: iTF_01513642;
80% Identity: iTF_01514290;