Basic Information

Insect: Vespula vulgaris
Gene Symbol: -
Assembly: GCA_905475345.1
Location: FR997669.1:10615284-10620339[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.15 9.2 6.4 6.3 2 23 85 107 84 107 0.97

2 18 0.0043 0.27 11.2 2.7 1 23 158 180 158 180 0.97

3 18 0.071 4.5 7.4 0.5 1 23 229 251 229 251 0.98

4 18 0.0044 0.28 11.2 0.1 1 20 306 325 306 327 0.93

5 18 0.00084 0.053 13.4 2.2 1 23 367 389 367 389 0.97

6 18 8.7e-05 0.0055 16.5 0.3 1 23 437 459 437 459 0.97

7 18 0.00049 0.031 14.2 0.1 1 23 465 487 465 487 0.97

8 18 6.4e-07 4.1e-05 23.3 0.5 2 23 531 553 531 553 0.95

9 18 0.014 0.86 9.6 1.1 1 23 560 583 560 583 0.92

10 18 0.0071 0.45 10.5 2.3 2 23 590 612 589 612 0.91

11 18 0.017 1 9.4 0.0 2 23 620 641 619 641 0.90

12 18 0.011 0.68 10.0 0.1 1 20 701 720 701 720 0.97

13 18 0.0015 0.093 12.7 0.4 2 23 740 761 739 761 0.95

14 18 5.7e-05 0.0036 17.1 2.8 1 23 775 797 775 797 0.97

15 18 2.1e-05 0.0013 18.5 2.8 1 23 817 840 817 840 0.96

16 18 0.0064 0.41 10.7 1.4 2 23 891 913 890 913 0.94

17 18 0.00014 0.0089 15.9 0.6 2 23 940 962 939 962 0.93

18 18 0.051 3.2 7.8 0.8 2 23 1051 1073 1051 1073 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.15	9.2	6.4	6.3	2	23	85	107	84	107	0.97
2	18	0.0043	0.27	11.2	2.7	1	23	158	180	158	180	0.97
3	18	0.071	4.5	7.4	0.5	1	23	229	251	229	251	0.98
4	18	0.0044	0.28	11.2	0.1	1	20	306	325	306	327	0.93
5	18	0.00084	0.053	13.4	2.2	1	23	367	389	367	389	0.97
6	18	8.7e-05	0.0055	16.5	0.3	1	23	437	459	437	459	0.97
7	18	0.00049	0.031	14.2	0.1	1	23	465	487	465	487	0.97
8	18	6.4e-07	4.1e-05	23.3	0.5	2	23	531	553	531	553	0.95
9	18	0.014	0.86	9.6	1.1	1	23	560	583	560	583	0.92
10	18	0.0071	0.45	10.5	2.3	2	23	590	612	589	612	0.91
11	18	0.017	1	9.4	0.0	2	23	620	641	619	641	0.90
12	18	0.011	0.68	10.0	0.1	1	20	701	720	701	720	0.97
13	18	0.0015	0.093	12.7	0.4	2	23	740	761	739	761	0.95
14	18	5.7e-05	0.0036	17.1	2.8	1	23	775	797	775	797	0.97
15	18	2.1e-05	0.0013	18.5	2.8	1	23	817	840	817	840	0.96
16	18	0.0064	0.41	10.7	1.4	2	23	891	913	890	913	0.94
17	18	0.00014	0.0089	15.9	0.6	2	23	940	962	939	962	0.93
18	18	0.051	3.2	7.8	0.8	2	23	1051	1073	1051	1073	0.94

Sequence Information

Coding Sequence: ATGGATAAACAATTTTATGGTCTATCGATAAAAACTGAGCCAGAAGATGATTATGATACGGATTGTACGATAGAAATAGAATCTGTCACTGGTAACGAATTACTATTGAATCCAATGGCGATTGCAGGTAAAGAGGACAGAATTATGGAAGCTGATTCGACTCAAAAATCAAATGCGGCTACTCCAAGCAGTAGAAAGAAGATGAAACGTGGTCCTCATACGCATTTCCGAGGTACTCGTGTTTATAAACAAAAGTGTACGCATTGTCAAATAAATTTACATTCTAAGTACACGTATATAAGACACATGCAAAGATTTCATAGTGACGAATGCGAAAATAAAGAGTTATCTAAGTCGATGTCTGCTGACGAAGAAGAATCGATCGAAGACGTGGAGGACGAATTAACGAGTATGGAGAACGATGCACCATTGACAGAGGTACAACAAAGTATAATCAGCCAATTGAAGACATTCTCGTGTTACTCGTGTCAGCAAACTTTTTCCGACAGAAGAAATACGCTTTCTCATATTCGTCAACACATGCCAGACTTAAGACCGTACACTTGTATCGCATGTTTAACGGAATTTCCTGATCGATCTATGTACAAATTGCACTGCAGTGCATCCTTCGAGTGTGCTATGAAAATTGCGTTGGTTATACCTAAGGAAGGGGAGGAAAAGTATTTCACTTGTAACATGTGTTTACGACCGATGCCAAACAGAAAAGAATTATTGAGTCATCTGTCGAAACATTCGGACAAGCAATACGAAGAAATGATGTCACCAATGAGATCTCCACCCAAGTTACAGCCTATGGCACCCTTGCCGTGTCCGAAGAAAGAAACGTTGCCGAAAACATCTCAGATGAATAGGGTCATTCTTGGACCTTATAAGAACGGCGATCCAGCGCATAATCACGCCTGCGATTTATGCGGCATGATTTACAGATACAAGCCTAATCTGTTGAAGCATCGTGTAATCTGTATCAGGTTGTCACCGGAAGTAAGAACTTGTTACAGATGCATTCATTGTGGTATGACTTATCTCGTCTTTAAAAAATTTCATAATCATATCACTATCGATCATAAGAAGAAAGAATTCGTTTGTTTCGAATGTAACGCCAAGTTCAGATCACCGAGTGATTATCTGACGCATCACGAGAAGCATCGACTGATGAACGTCGATCAACATCATCCGCAGGTTGCTAGTAATCCAATCATGTCGCCTCATCGTGGGCAGAGTCCTTTAAAATCGTGGAGTGATAACGAGGAAGCTACGGTATCGAGACGAAGCGTCGAGGGTCAACGATACGTTTGTAATCTTTGTGGTCAGGATTTTACTACGAGAGCCAAATTGGCTGAACATAAGAACCTTCATCTAAAAGTAAAGATATATTCGTGCGTTATTTGCCGTAGTATGTTTAGCAGCGCTGGTGCTTTAGAAATTCACATGAAAGATCACGGCATTGAAGATCCACAAGAAAGAAATGCCAATAGTTCTTGCGTCGAATACGAACGACTCGACGATAGTCCACAAGGAATTAATTCTATTAACACAAGTGCGGTCTCAGATCCAGGCGAACGAAGAAACGAATGTAACATATGCGGAAAGGTATTCTCCAATTATCCGAATCTGAGAAGGCACTTTAGGAATATTCACAAGGACAGCAAAGCACGTTTCACTTGTATACGTTGCTCGTTATCCTTCAAAACTAAAGAGCTTTACGAACGTCATGCGAGACTCGATCACAAAACGAAAGTTATGTTAATGTGTCGTCAGTGTCCTAAAACGTTTACCTTCAAAGCTAATTTGGATCTCCATTGTAGGAGTGCTCACGGAGATAAATCTGGTAATCAAGAATGTGATATTTGTGGTAAAGTCTTTTTAGAGGAAGCCTCGTTAAAGATTCATCGAGGTTGGCACAACCGAGCAAATTCGCGTTTGTATACTCGGTCCTTCTTGAACAATGAAATTAAAGCTGCAACTTCGCTCTCTCCTGCCGAGGGCAGCGTCGGCAGTTTAGTCGTTACAACGCCCGAACGTCCAGCCAGGGCAAGAAAATCTTTTCCCAATCCACCACCTACGAAGCCACAGAACAATTACCAGTGTCAAGTATGCGACGGCAAATTCGAAGACGTGGTTGAGTTAAGGAAACATTTGTGGGACGTCCATTGTGCTCGTAACAAGCCAGAGAAAAGTTTTTCAGGTGACGAACTTCAATGTCAGTTATGTACCAATATTTTTCCTGATCAGAAGACCCTAAAAACGCACATGGATTGGCACAAAGCGAATCCGATATTGAGCGATTTACAAAAGCAAACTTTCCCTTGCGAGATATGCGGCAAGCATTACAGTTCGAAGAAGGTCTTGACAAAACACAAGAAGCTTCACAAAGCGAACACGGTAGCTTCGATGAAGTTCCAATCGCTCGGTAGAAAGAACGCTCAATTCTTCTGCAACATCTGTCGAAAGATCTTCAGCAGCAATCAATCGTTGCAACGACATAGAATGTCTTTCCACAGCGATTTACAGACTAATCAAGCACAGAACAGTAGTACTCTGCGAATATCTAGCGAGGAATATAAATCAAAGAAAATTGACTTCGAATTAGAAGAGGATGTCGCGAAGGAATATACTTTGAATTTAACCAATGCCGGTAGGAAACCGGTTACTTGTCATTTGTGTAAGAAGATATTTCCGAACATGAGTGTTTTGTACAAACACAAACAATTGATTCACAAACCAAGAGTAGCAAAGGTGATCGGTAAACTATCGACGAACGAGTGCGTTCCTATACCAAGCGCTGACGGTCGAATTTCGTGCAATTTGTGTGGTAAACAGTTCTCGGCATTGTCAAATTTGAGACAACACTTCTCCGTGAAGCATAGAAACAACCCGAAAAGTCGTTGTACCACAGCCAGCTGTAACCCTACGTACTCGGTTCAATCGCAGTCTCTAAAGACCGAAAGTTTACCGCACAAAGCAATGATTCTCTGTTGCAAACTCTGCAATCGTCACGTTTGGAGCAGAGAAGAGATAGCTAATCACATGGTTTCTGTACATGGAACAGCTTATGAACCCGATAATAACAGTAATTTTCATAGGGAAACTGATCTTACCACTTACGTCGTCGAAGGTGCCGTTAATGCGACCTGTCCTCGTTGCAATATCAAATATCCTAACAATAGAGCTATGAAGATCCATTACTTTAAATTCCACGAAGCTACAGACTAA
Protein Sequence: MDKQFYGLSIKTEPEDDYDTDCTIEIESVTGNELLLNPMAIAGKEDRIMEADSTQKSNAATPSSRKKMKRGPHTHFRGTRVYKQKCTHCQINLHSKYTYIRHMQRFHSDECENKELSKSMSADEEESIEDVEDELTSMENDAPLTEVQQSIISQLKTFSCYSCQQTFSDRRNTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCSASFECAMKIALVIPKEGEEKYFTCNMCLRPMPNRKELLSHLSKHSDKQYEEMMSPMRSPPKLQPMAPLPCPKKETLPKTSQMNRVILGPYKNGDPAHNHACDLCGMIYRYKPNLLKHRVICIRLSPEVRTCYRCIHCGMTYLVFKKFHNHITIDHKKKEFVCFECNAKFRSPSDYLTHHEKHRLMNVDQHHPQVASNPIMSPHRGQSPLKSWSDNEEATVSRRSVEGQRYVCNLCGQDFTTRAKLAEHKNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPQERNANSSCVEYERLDDSPQGINSINTSAVSDPGERRNECNICGKVFSNYPNLRRHFRNIHKDSKARFTCIRCSLSFKTKELYERHARLDHKTKVMLMCRQCPKTFTFKANLDLHCRSAHGDKSGNQECDICGKVFLEEASLKIHRGWHNRANSRLYTRSFLNNEIKAATSLSPAEGSVGSLVVTTPERPARARKSFPNPPPTKPQNNYQCQVCDGKFEDVVELRKHLWDVHCARNKPEKSFSGDELQCQLCTNIFPDQKTLKTHMDWHKANPILSDLQKQTFPCEICGKHYSSKKVLTKHKKLHKANTVASMKFQSLGRKNAQFFCNICRKIFSSNQSLQRHRMSFHSDLQTNQAQNSSTLRISSEEYKSKKIDFELEEDVAKEYTLNLTNAGRKPVTCHLCKKIFPNMSVLYKHKQLIHKPRVAKVIGKLSTNECVPIPSADGRISCNLCGKQFSALSNLRQHFSVKHRNNPKSRCTTASCNPTYSVQSQSLKTESLPHKAMILCCKLCNRHVWSREEIANHMVSVHGTAYEPDNNSNFHRETDLTTYVVEGAVNATCPRCNIKYPNNRAMKIHYFKFHEATD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233839;
90% Identity: iTF_01513642;
80% Identity: iTF_01514947;