Basic Information

Insect: Vespula germanica
Gene Symbol: -
Assembly: GCA_905340365.1
Location: HG996528.1:11595381-11599782[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.67 1.2e+03 -0.7 8.6 7 44 257 289 254 289 0.83

2 17 0.31 5.6e+02 0.4 0.4 15 39 337 362 330 370 0.82

3 17 3.2 5.7e+03 -2.9 0.1 15 24 408 417 405 432 0.66

4 17 1.4 2.5e+03 -1.7 0.4 19 29 489 499 485 508 0.79

5 17 0.47 8.4e+02 -0.2 3.3 13 26 516 529 510 544 0.81

6 17 1.9 3.5e+03 -2.2 0.4 5 27 537 558 532 567 0.71

7 17 0.092 1.7e+02 2.1 0.1 14 28 615 629 609 642 0.79

8 17 1.7e-05 0.031 14.0 0.2 16 44 710 735 704 735 0.88

9 17 0.23 4.2e+02 0.8 1.5 6 43 759 793 756 794 0.76

10 17 0.2 3.5e+02 1.0 1.1 13 26 796 809 788 816 0.84

11 17 0.64 1.1e+03 -0.6 0.0 15 43 880 905 870 906 0.75

12 17 0.76 1.4e+03 -0.9 0.1 18 39 921 939 918 945 0.81

13 17 0.004 7.1 6.4 0.6 12 30 951 970 944 978 0.79

14 17 0.0044 7.9 6.3 0.2 17 29 998 1010 988 1022 0.70

15 17 0.11 1.9e+02 1.9 0.1 15 26 1069 1080 1055 1089 0.83

16 17 1.9e-06 0.0035 17.0 0.0 12 44 1115 1144 1111 1144 0.87

17 17 8 1.4e+04 -4.2 1.9 19 26 1181 1188 1174 1202 0.65

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.67	1.2e+03	-0.7	8.6	7	44	257	289	254	289	0.83
2	17	0.31	5.6e+02	0.4	0.4	15	39	337	362	330	370	0.82
3	17	3.2	5.7e+03	-2.9	0.1	15	24	408	417	405	432	0.66
4	17	1.4	2.5e+03	-1.7	0.4	19	29	489	499	485	508	0.79
5	17	0.47	8.4e+02	-0.2	3.3	13	26	516	529	510	544	0.81
6	17	1.9	3.5e+03	-2.2	0.4	5	27	537	558	532	567	0.71
7	17	0.092	1.7e+02	2.1	0.1	14	28	615	629	609	642	0.79
8	17	1.7e-05	0.031	14.0	0.2	16	44	710	735	704	735	0.88
9	17	0.23	4.2e+02	0.8	1.5	6	43	759	793	756	794	0.76
10	17	0.2	3.5e+02	1.0	1.1	13	26	796	809	788	816	0.84
11	17	0.64	1.1e+03	-0.6	0.0	15	43	880	905	870	906	0.75
12	17	0.76	1.4e+03	-0.9	0.1	18	39	921	939	918	945	0.81
13	17	0.004	7.1	6.4	0.6	12	30	951	970	944	978	0.79
14	17	0.0044	7.9	6.3	0.2	17	29	998	1010	988	1022	0.70
15	17	0.11	1.9e+02	1.9	0.1	15	26	1069	1080	1055	1089	0.83
16	17	1.9e-06	0.0035	17.0	0.0	12	44	1115	1144	1111	1144	0.87
17	17	8	1.4e+04	-4.2	1.9	19	26	1181	1188	1174	1202	0.65

Sequence Information

Coding Sequence: ATGGACGACATCGTTGAGCTATTGAACGTTGAAAACGTGTGCAGATTGTGTCTATCTGTCGAAGAACCGAAATCGTCGATCTTCGGGGCACAAGATTCCTCTGCTGCTGTACCACTCGTTACTAAAATACAGGCATGCCTATCACTTCagATTTTATCTACCGACAAAGTGTCTACGTTGATATGTTCTTCGTGCGTAAACAATGTAAATCAGTGGTACAACTACAAGGAAACTTGTTTTCGTTCTCAGGACAAATTGCAGAAATGGCTAGAAACTCATCCACAGACAAACCCAGtggttgtaaatataaaagaggaaCCTATGGACATAGATTATTGCGAAGATAACGCTAAAATATCTGAATGCAACAATGAATCAAGCTCTcGTGTAAATCATGTAAAGTCTGCAAGTAAACTTCATTCTAAAGATGAAGCTCGGACGGGAGAAGTACAAATTGACAAGACGCGTGACTTAGGTAAAGACAAGAAATTTAAAGCTTTTCAGTCAACTCCATTGAAGAATGCAGATAGGGAGGAGCATAGAATGGATAAACAATTTTATGGTGTATCGATAAAAACTGAGCCAGAAGATGATTATGATACGGATTGTACGATAGAAATAGAATCGGTCACTGGTAACGAATTACTATTGAATCCAATGGCGATTGCAGGTAAAGAGGACAGAATTATGGAAGCTGATTCGACTCAAAAATCAAATGCGGCTACTCCAAGCAgtagaaagaagatgaaacgTGGTCCTCATACGCATTTCCGAGGTACTCGTGTTTATAAACAAAAGTGTACGCATTgtcaaataaatttacattctAAGTACACGTATATAAGACACATGCAAAGATTTCATAGTGACGAATGCGAAAATAAAGAGTTATCTAAGTCGATGTCTGCTGACGAAgaagaatcgatcgaagatGTGGAAGACGAATTAACGAGTATGGAGAACGATGCGCCATTGACGGAGGTACAACAAAGTATAATCAGCCAATTGAAGACATTCTCGTGTTACTCGTGTCAGCAAACTTTTTCCGACAGAAGAAATACGCTTTCTCATATTCGTCAACACATGCCAGACTTAAGACCGTACACTTGTATCGCATGTTTAACGGAATTTCCTGATCGATCTATGTACAAATTGCACTGCAGTGCATCCTTCGAGTGTGCTATGAAAATTGCGTTGGTTATACCTAAGGAAGGGGAGGAAAAGTATTTCACTTGTAACATGTGTTTACGACCGATGCCaaacagaaaagaattattgagTCATCTGTCGAAACATTCGGATAAGCAATACGAAGAAATGATGTCACCAATGAGATCTCCACCCAAGTTACAGCCTATGGCACCCTTGCCGTGCCCGAAGAAGGAAACGTTGCCGAAAACATCTCAGATGAATAGGGTCATTCTTGGACCTTATAAGAACGGCGATCCAGCGCATAATCACGCCTGCGATTTATGCGGCATGATTTACAGATACAAGCCTAATCTGTTGAAGCATCGTGTGATCTGTATCAGGTTGTCACCGGAAGTAAGAACTTGTTACAGATGCATTCATTGTGGTATGACGTATCTcgtctttaaaaaatttcataatcatATCACTATCGATCATAAGAAGAAGGAATTCGTTTGTTTCGAATGTAACGCCAAGTTCAGATCACCGAGTGATTATCTGACGCATCACGAGAAGCATCGACTGATGAACGTCGATCAGCATCATCAGCAGGTTGCTAGTAATCAAATCATGTCGCCTCATCGTGGGCAGAGTCCTTTAAAATCGTGGAGTGATAACGAGGAAGCTACGGTATCGAGACGAAGCGTCGAGGGTCAACGATACGTTTGTAATCTTTGTGGTCAGGATTTTACTACGAGAGCCAAATTGGCTGAACATAAGAACCTTCATCTAAAAGTAAAGATATATTCGTGCGTTATTTGCCGTAGTATGTTTAGCAGCGCTGGTGCTTTAGAAATTCACATGAAAGATCACGGCATTGAAGATCCACAAGAAAGAAATGCCAATAGTTCTTGCGTCGAATACGAACGACTCGACGATAGTCCGCAAGGAATTAATTCTATTAACACAAGTGCGGTCTCAGATCCAggcgaacgaagaaacgaatgtAACATATGCGGAAAGGTATTCTCCAATTATCCGAATCTGAGAAGGCACTTTAGGAATATTCACAAGGACAGCAAAGCACGTTTCACTTGTATACGTTGCTCGTTATCCTTCAAAACTAAGGAGCTTTACGAACGTCATGCGAGACTCGATCACAAAACGAAAGTTATGTTAATGTGTCGTCAGTGTCCTAAAACGTTTACCTTCAAAGCTAATTTGGATCTCCATTGTAGGAGTGCTCACGGAGATAAATCTGGTAATCAAGAATGTGATATTTGTGGTAAAGTCTTTTTAGAGGAAGCCTCGTTAAAGATTCATCGAGGTTGGCACAACCGAGCAAATTCGCGTTTGTATACTCGGTCCTTCTTGAACAATGAGATCAAAGCTGCAACTTCGCTCTCTCCTGCCGAGGGCAGCGTCGGTAGTTTAGTCGTTACAACGCCCGAACGTCCAGCCAGGGCAAGAAAATCTTTTCCCAATCCACCACCTACGAAGCCGCAGAACAATTACCAGTGTCAAGTATGCGACGGCAAATTCGAAGACGTGGTTGAGTTAAGGAAACATTTGTGGGACGTCCATTGTGCTCGTAACAAGCCAGAGAAAAGTTTTTCAGGTGACGAACTTCAATGTCAGTTATGTACCAATATTTTTCCTGATCAGAAGACCCTAAAAACACACATGGATTGGCACAAAGCGAATCCGATATTGAGCGATTTACAAAAGCAAACTTTCCCTTGCGAGATATGCGGCAAGCATTACAGTTCGAAGAAGGTCTTGACAAAACACAAGAAGCTTCACAAAGCGAACACGGTAGCTTCGATGAAGTTCCAATCGCTCGGCAGAAAGAACGCTCAATTCTTCTGCAACATCTGTCGAAAGATCTTCAGCAGCAATCAATCGTTGCAACGACATAGAATGTCTTTCCACAGCGATTTACAGACTAATCAAGCACAGAACAGTAGTACTCAGCGAATACCTAGCGAGGAatataaatcaaagaaaattgaCTTCGAATTAGAAGAGGATGTCGCGAAGGAATATACTTTGAATTTAACTAATGCCGGTAGGAAACCGGTTACTTGTCATTTGTGTAAGAAGATATTTCCGAACATGAGTGTTTTGTACAAACACAAACAATTGATTCACAAACCAAGAGTAGCAAAGGTGATCGGTAAACTATCGACGAACGAGTGCGTTCCTATACCAAGCGCTGACGGTCGAATTTCGTGCAATTTGTGTGGTAAACAGTTCTCGGCATTGTCAAATTTGAGACAACACTTCTCCGTGAAGCATAGAAACAATCCGAAAAGTCGTTGTACCACAGCCAGCTGTAACCCTACGTACTCGGTTCAATCGCAGTCTCTAAAGACCGAAAGTTTACCGCACAAAGCAATGATTCTCTGTTGCAAACTCTGCAATCGTCACGTTTGGAGCAGAGAAGAGATAGCTAATCACATGGTTTCTGTACATGGAACAGCTTATGAACCCGATAACAACAGTAATTTTCATAGGGAAACTGATCTTACCACTTACGTCGTCGAAGGTGCCGTTAATGCGACCTGTCCTCGTTGCAATATCAAATATCCTAACAATAGAGCTATGAAGATCCATTACTTTAAATTCCACGAAGCTACAGACTAA
Protein Sequence: MDDIVELLNVENVCRLCLSVEEPKSSIFGAQDSSAAVPLVTKIQACLSLQILSTDKVSTLICSSCVNNVNQWYNYKETCFRSQDKLQKWLETHPQTNPVVVNIKEEPMDIDYCEDNAKISECNNESSSRVNHVKSASKLHSKDEARTGEVQIDKTRDLGKDKKFKAFQSTPLKNADREEHRMDKQFYGVSIKTEPEDDYDTDCTIEIESVTGNELLLNPMAIAGKEDRIMEADSTQKSNAATPSSRKKMKRGPHTHFRGTRVYKQKCTHCQINLHSKYTYIRHMQRFHSDECENKELSKSMSADEEESIEDVEDELTSMENDAPLTEVQQSIISQLKTFSCYSCQQTFSDRRNTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCSASFECAMKIALVIPKEGEEKYFTCNMCLRPMPNRKELLSHLSKHSDKQYEEMMSPMRSPPKLQPMAPLPCPKKETLPKTSQMNRVILGPYKNGDPAHNHACDLCGMIYRYKPNLLKHRVICIRLSPEVRTCYRCIHCGMTYLVFKKFHNHITIDHKKKEFVCFECNAKFRSPSDYLTHHEKHRLMNVDQHHQQVASNQIMSPHRGQSPLKSWSDNEEATVSRRSVEGQRYVCNLCGQDFTTRAKLAEHKNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPQERNANSSCVEYERLDDSPQGINSINTSAVSDPGERRNECNICGKVFSNYPNLRRHFRNIHKDSKARFTCIRCSLSFKTKELYERHARLDHKTKVMLMCRQCPKTFTFKANLDLHCRSAHGDKSGNQECDICGKVFLEEASLKIHRGWHNRANSRLYTRSFLNNEIKAATSLSPAEGSVGSLVVTTPERPARARKSFPNPPPTKPQNNYQCQVCDGKFEDVVELRKHLWDVHCARNKPEKSFSGDELQCQLCTNIFPDQKTLKTHMDWHKANPILSDLQKQTFPCEICGKHYSSKKVLTKHKKLHKANTVASMKFQSLGRKNAQFFCNICRKIFSSNQSLQRHRMSFHSDLQTNQAQNSSTQRIPSEEYKSKKIDFELEEDVAKEYTLNLTNAGRKPVTCHLCKKIFPNMSVLYKHKQLIHKPRVAKVIGKLSTNECVPIPSADGRISCNLCGKQFSALSNLRQHFSVKHRNNPKSRCTTASCNPTYSVQSQSLKTESLPHKAMILCCKLCNRHVWSREEIANHMVSVHGTAYEPDNNSNFHRETDLTTYVVEGAVNATCPRCNIKYPNNRAMKIHYFKFHEATD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233839;
90% Identity: iTF_01513642;
80% Identity: iTF_01513642;