Pfes017114.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- retn
- Assembly
- GCA_950381575.1
- Location
- OX494447.1:4714228-4719115[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-20 2.4e-16 60.6 0.0 5 89 36 117 32 117 0.89 2 2 6.5 1.6e+04 -3.0 0.0 25 38 246 259 208 260 0.56
Sequence Information
- Coding Sequence
- ATGCGATGCGATTCACCACGCTCGCCGCCTTGTTGCCCTCTTGACAAGGATTGTCACAGCAAGCGCTTTTTAGCTGCATCTGATAAATTGCGTCGTACGAACAACTTTGTTAAACCTTACCTGACAATGTTGGGTGACAGCACTCCGATCAACCGGTTGCCGATCATGGCGAAGTCCGTGCTGGACCTGTACGAGCTGTACAACTTGGTCATAGCACGCGGCGGTCTGGTCGAAGTCATCAACAAGAAGCTTTGGCAGGAGATCATTAAGGGTCTCCGGCTTCCATCGTCTATTACATCCGCTGCATTTACTTTACGCACACAataCATGAAATACCTGTATGACTACGAGTGTGAAAAGAAGAACCTATCAACCCGGAGCGAGCTAGACGCGGCCATTGAAGGCAACAAGCGCGAGGGACGCCGCGCTTCCGGCCAGTATGATGCACAAGCTGCTTTGTCTATGCCTCCTCTCAACCGTGGAGTCCCAGCCTCACTCGCCCAGCTGTCCCAACACATGCAGCCTCTCTCCCTCTCCCTGGCCGGCGTGGCGCCGCGCCTGCCGCCGCTACCGCCGCACGCACCGCACCTCGGACAACACGACATCGAGTATAGAGTTCGGGAGTACATGAAGATGATACAGCAACAGAGAGAGCTAATGAGAAATGGCTCCGAATCGCCCCCAAACAACGGTCCAGCGCCAATCATGTCTCCCCGTGATGCTGCTGCGCTCAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCACTGTAcaacaataacaacaacaacagCCCACAGCCAGACCTTGAGCCTCAACGCGAGGCTCTGAATCTGAGTGAGAGTCCGAACTCGAGTGTAAGCGGCGGCAAGCGCGAGGCGTGTCggtcgcccgcgccgcccgccaagcgccgcacgccgcgcccCGCGTCACCGCGCGACACACGCGACGCACGTGACACACGCGACACGCACACGCCGCTGTCGCCGCACGAGTCGCACGACGCGCACGCACGACGGCACGCCCGCCGAGAGGCTTCACCACCACAGATTAACGGGATGCCCAACAACAATGGTGTTAATGGCGCTGCCTTCAAGATTACCACCAGAGGTGACGCAAACACAGGTGATCAGCAGCTAGTGGTCTCAATAGAGCTAAACGGAGTCACATACGAGGGAGTCCTCTTCCCATCAGGAAACGGTCAAAACGGGCACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MRCDSPRSPPCCPLDKDCHSKRFLAASDKLRRTNNFVKPYLTMLGDSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPPLNRGVPASLAQLSQHMQPLSLSLAGVAPRLPPLPPHAPHLGQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSVSGGKREACRSPAPPAKRRTPRPASPRDTRDARDTRDTHTPLSPHESHDAHARRHARREASPPQINGMPNNNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_00185923; iTF_00326867; iTF_00000100; iTF_00000968; iTF_00185094;
- 80% Identity
- -