Apul007172.1
Basic Information
- Insect
- Autographa pulchrina
- Gene Symbol
- retn
- Assembly
- GCA_905475315.1
- Location
- FR997780.1:8120402-8129590[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 7.9e-16 59.0 0.0 17 89 61 131 56 131 0.94 2 2 4.5 1.8e+04 -3.0 0.0 25 38 260 273 222 274 0.56
Sequence Information
- Coding Sequence
- ATGGGCGGCGGGGCCGGGAGAGCGGGCCGCGCTCATTGGCCCGGCGCGGGGTTGTCGGCTCCAAGGGCATTGATTACTGCTCTCGATAAGCGGGAGGCGTCGAATGTCGATTCGATCGATTATCGCCCGTGCGGTCGCGCCGCTCGCCGGCCCGCGCCAAGCGACTCGCGCACACCTTCACGTACTCCGATCAACCGGTTGCCGATCATGGCCAAGTCTGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCTCGCGGCGGCCTGGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCGGCTGCCCTCGTCCATCACATCCGCTGCATTTACTTTGCGCACACAATACATGAAATACCTGTACGATTACGAGTGTGAGAAGAAGAACCTGTCGACCCGGAGCGAGCTGGACGCGGCCATCGAAGGCAACAAGCGCGAGGGGCGCCGCGCCTCTGGACAGTACGATGCACAAGCTGCGTTATCTATGCCTCCCCTCAACCGCGGCGTGCCAGCTTCGCTCGCCCAGCTGTCGCAGCACATGCAACCGCTGTCGCTCTCCCTCGCCGGCGTGGCGCCGCGCCTGCCGCCGCTGCCGCCGCACGCGCCGCATCTCGGACAACACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGAGAACTTATGAGAAATGGCTCCGAATCGCCCCCCAACAACGGCCCAGCACCGATTATGTCTCCCCGCGACGCTGCAGCGCTCAGTGCCATCGACGTCTCCCGCCTCACACTCTGGTCGCTGTACAACAATAACAACAACAACAGTCCGCAGCCAGACCTTGAACCGCAACGCGAGGCCTTGAATCTGAGCGAGAGTCCGAACTCGAGCGTGAGCGGCGGCAAGCGCGAGGCGTGCCGGTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGGCCCGCCTCCCCGCGCGACATCCGCGACAGCCGCGACGCCCGCGACACACCGCACGCGCCGCTGTCCCCGCACGAGCCACACTCCCCGCACGCACGACGACACGCCCGCAGAGACGCTTCACCACCACAGATCAATGGGATGCCCAATACCAATGGTGTTAATGGGGCTGCCTTCAAGATTACCACCAGAGGCGACGCAACCACAGGTGACCAACAGCTAGTTGTCTCAATAGAACTAAACGGAGTCACGTACGAGGGCGTCCTCTTCCCTTCAGGGAACGGTCAGAACGGACACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MGGGAGRAGRAHWPGAGLSAPRALITALDKREASNVDSIDYRPCGRAARRPAPSDSRTPSRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPPLNRGVPASLAQLSQHMQPLSLSLAGVAPRLPPLPPHAPHLGQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSVSGGKREACRSPAPPAKRRTPRPASPRDIRDSRDARDTPHAPLSPHEPHSPHARRHARRDASPPQINGMPNTNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01221278;
- 80% Identity
- -