Atri005529.1
Basic Information
- Insect
- Abrostola triplasia
- Gene Symbol
- retn
- Assembly
- GCA_946251925.1
- Location
- CAMIUJ010000018.1:3991546-3996511[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-20 6.9e-17 61.8 0.0 16 89 9 80 4 80 0.95 2 2 5 9.1e+03 -2.7 0.0 25 38 209 222 171 224 0.57
Sequence Information
- Coding Sequence
- ATGCAGGCGATAACTTACGGTTGTCAAGGCACTCCTATCAACCGGTTGCCGATTATGGCGAAGTCGGTGTTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGCCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGGCTGCGGCTGCCGTCCTCCATCACTTCTGCTGCCTTCACGTTACGCACACAATACATGAAATACTTGTACGACTATGAGTGTGAGAAGAAGAACTTGTCGACTCGGAGCGAGCTGGACGCGGCTATAGAAGGCAACAAGCGCGAGGGGCGCCGCGCCTCAGGCCAGTACGATGCACAAGCGGCGTTAGCTATGCCTCCCCTGAACCGCGGCGTGCCGGCGTCTCTCGCGCAGCTGTCGCAACACATGCAGCCACTGTCCCTGTCGCTGGGAGGCGTGGCCCCGCGACTGCCGCCGCTACCACCGCACGCGCCGCACCTCGCGCAGCACGACATTGAGTACAGGGTGCGCGAGTACATGAAAATGATACAGCAGCAGAGGGAGCTTATGAGAAACGGCTCCGAGTCTCCCCCTAACAACGGTCCAGCGCCCATAATGTCTCCCCGCGACGCAGCCGCTCTTAGTGCCATCGACGTATCCCGCCTCACTCTCTGGTCGCTCTACAATAATAACAACAACAACAGTCCACAGCCAGACCTTGAGCCCCAACGCGAGGCTCTGAATCTGAGCGAGAGTCCCAACTCCAGCGTGAGCGTGAAGCGCGAGGCGTGCCGCTCTCCGGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCGTCCCCGCGCGACCCCCGCGACGCCCGCGACCCCCGCTCCCCCCGCGACGCGCCGCACGCGCCGCTCTCCCCGCCCGAGCCGCACGAGCCGCACGCGCGCCGCCACGCCCACCGAGCCTCGCCGCCGCAGATCAACGGCATGCCCAACACTAACGGAGTCAATGGGGCAGCCTTCAAAATTACCACAAGAGGTGACGCGAGCACAGGTGATCAGCAACTGGTGGTTTCAATAGAACTGAACGGCGTCACGTATGAAGGCGTTCTCTTCCCTTCAGGAAACGGTCAGAACGGACACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MQAITYGCQGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSVSVKREACRSPAPPAKRRTPRPASPRDPRDARDPRSPRDAPHAPLSPPEPHEPHARRHAHRASPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01221278;
- 80% Identity
- -