Atri006461.1
Basic Information
- Insect
- Abrostola tripartita
- Gene Symbol
- retn
- Assembly
- GCA_905340225.1
- Location
- HG996503.1:4329432-4334498[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-20 1.6e-16 60.8 0.0 13 89 1 75 1 75 0.94 2 2 3.2 1e+04 -2.7 0.0 25 38 204 217 166 219 0.57
Sequence Information
- Coding Sequence
- ATGGCTTCATCTCGCACTCCTATCAATCGGTTGCCGATCATGGCGAAGTCGGTGCTGGACCTGTATGAACTGTACAACTTGGTGATCGCGCGCGGCGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAAGGTCTGCGGCTGCCGTCCTCCATCACATCAGCTGCCTTCACGTTACGCACACAGTACATGAAATACTTGTACGACTATGAGTGTGAGAAGAAGAACTTATCGACTCGGAGCGAGCTGGACGCGGCTATAGAAGGCAACAAGCGCGAGGGGCGCCGCGCCTCAGGCCAGTACGACGCACAAGCAGCGTTAGCTATGCCTCCCCTGAACCGCGGCGTGCCGGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCCCTGTCGCTGGGGGGCGTGGCCCCGCGCCTGCCGCCGCTACCGCCGCACGCTCCGCACCTCGCGCAGCACGACATTGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAACGGCTCCGAGTCCCCTCCAAACAACGGCCCAGCGCCCATAATGTCTCCCCGCGACGCAGCCGCTCTCAGTGCCATCGACGTATCCCGCCTCACTCTCTGGTCGCTCTACAACAATAACAACAACAACAGTCCACAGCCAGACCTTGAGCCCCAACGCGAGGCTCTGAATCTGAGCGAGAGTCCCAACTCCAGCGTGAGCGTGAAGCGCGAGGCGTGCCGCTCGCCGGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCGTCCCCCCGCGACCCCCGCGACGCCCGCGACGCCCGCGACTCCCGCGACGCGCCGCACGCGCCGCTCTCCCCGCCCGAGCCGCACGAGCCGCACGCGCGCCGCCACGCCCATCGAGCCTCGCCGCCGCAGATCAACGGCATGCCCAACACCAATGGAGTCAATGGGGCAGCCTTCAAAATTACCACAAGAGGTGATGCGAGCACAGGTGATCAGCAGCTGGTTGTGTCAATAGAACTGAACGGTGTCACGTACGAAGGCGTTCTCTTCCCTTCAGGAAACGGTCAGAACGGACACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MASSRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSVSVKREACRSPAPPAKRRTPRPASPRDPRDARDARDSRDAPHAPLSPPEPHEPHARRHAHRASPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01221278;
- 80% Identity
- -