Agaa002905.1
Basic Information
- Insect
- Autographa gamma
- Gene Symbol
- retn
- Assembly
- GCA_905146925.1
- Location
- LR989867.1:3836942-3841924[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-19 5.9e-16 59.2 0.0 17 89 46 116 39 116 0.94 2 2 4.3 1.4e+04 -2.9 0.0 25 38 245 258 207 259 0.56
Sequence Information
- Coding Sequence
- ATGCGATGCGATTCTCCACGCTCGCCTCGTTGCCCGCTTGACAAGGATTGTCACAGCAAGCGCTTTTTAGCTGCATCCGACAAATTACGTTGTACCGACAACTTTGTTATACCTTACCTGACAATGCCGGGCGACAGTACTCCGATCAACCGGCTGCCGATCATGGCCAAGTCAGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCTCGCGGCGGCCTGGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCGGCTGCCCTCGTCCATCACATCTGCTGCATTTACTTTGCGTACACAATACATGAAATACCTGTACGACTACGAGTGTGAGAAGAAGAACCTGTCGACCCGGAGCGAGCTGGACGCGGCCATCGAAGGCAACAAGCGCGAGGGCCGCCGCGCTTCCGGACAGTACGATGCACAAGCTGCGTTGTCTATGCCTCCCCTGAACCGCGGCGTGCCAGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCCCTCTCGCTCGCCGGCGTGGCGCCGCGCCTGCCGCCGCTGCCGCCGCACGCGCCGCACCTCGGACAACACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGAGAGCTTATGAGAAATGGCTCGGAATCGCCCCCCAACAACGGCCCAGCACCCATCATGTCTCCCCGTGACGCCGCCGCTCTCAGTGCCATCGACGTCTCCCGCCTCACACTCTGGTCGCTCTACAACAATAACAACAACAACAGTCCGCAGCCAGACCTTGAACCGCAACGCGAGGCCTTGAATCTGAGCGAGAGTCCGAACTCGAGCGTGAGCGGCGGCAAGCGCGAGGCGTGCCGGTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCCTCGCCGCGCGACATCCGCGACTCCCGCGACACGCCGCACGCGCCGCTGTCCCCGCACGAGCCGCACTCCCCGCACGCGCGCCGCCACGCCCGCAGAGACGCTTCACCGCCACAGATCAATGGCATGCCCAATACCAATGGTGTTAATGGGGCTGCCTTCAAGATTACCACCAGAGGCGACGCAACCACAGGTGACCAGCAGCTGGTTGTCTCAATAGAACTAAACGGAGTCACGTACGAGGGCGTCCTCTTCCCCTCAGGGAACGGTCAGAACGGGCACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MRCDSPRSPRCPLDKDCHSKRFLAASDKLRCTDNFVIPYLTMPGDSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPPLNRGVPASLAQLSQHMQPLSLSLAGVAPRLPPLPPHAPHLGQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSVSGGKREACRSPAPPAKRRTPRPASPRDIRDSRDTPHAPLSPHEPHSPHARRHARRDASPPQINGMPNTNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01221278;
- 80% Identity
- -