Basic Information

Insect: Philonicus albiceps
Gene Symbol: Rreb1
Assembly: GCA_963969385.1
Location: OZ017774.1:2091260-2096849[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0046 0.66 11.4 0.6 1 21 171 191 171 193 0.96

2 15 0.0013 0.19 13.1 0.1 1 23 203 225 203 225 0.98

3 15 1.7e-05 0.0025 19.0 7.5 1 23 231 253 231 253 0.98

4 15 5.2 7.4e+02 1.8 0.3 1 9 370 378 370 394 0.74

5 15 0.047 6.8 8.2 0.6 2 20 400 418 400 420 0.93

6 15 1.2 1.7e+02 3.8 0.3 1 20 463 482 463 484 0.76

7 15 0.0069 1 10.8 0.1 1 23 618 640 618 640 0.97

8 15 2.4e-05 0.0034 18.6 0.9 1 23 649 671 649 671 0.99

9 15 0.00088 0.13 13.6 2.1 1 23 677 700 677 700 0.97

10 15 0.0007 0.1 13.9 2.1 1 23 1025 1048 1025 1048 0.95

11 15 6.4e-05 0.0092 17.2 0.3 2 23 1338 1359 1337 1359 0.97

12 15 0.11 15 7.1 6.3 1 23 1365 1388 1365 1388 0.97

13 15 0.95 1.4e+02 4.1 5.1 1 23 1447 1469 1447 1470 0.95

14 15 0.0062 0.9 11.0 0.5 3 23 1517 1537 1515 1537 0.96

15 15 0.001 0.15 13.4 4.8 1 23 1543 1565 1543 1565 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0046	0.66	11.4	0.6	1	21	171	191	171	193	0.96
2	15	0.0013	0.19	13.1	0.1	1	23	203	225	203	225	0.98
3	15	1.7e-05	0.0025	19.0	7.5	1	23	231	253	231	253	0.98
4	15	5.2	7.4e+02	1.8	0.3	1	9	370	378	370	394	0.74
5	15	0.047	6.8	8.2	0.6	2	20	400	418	400	420	0.93
6	15	1.2	1.7e+02	3.8	0.3	1	20	463	482	463	484	0.76
7	15	0.0069	1	10.8	0.1	1	23	618	640	618	640	0.97
8	15	2.4e-05	0.0034	18.6	0.9	1	23	649	671	649	671	0.99
9	15	0.00088	0.13	13.6	2.1	1	23	677	700	677	700	0.97
10	15	0.0007	0.1	13.9	2.1	1	23	1025	1048	1025	1048	0.95
11	15	6.4e-05	0.0092	17.2	0.3	2	23	1338	1359	1337	1359	0.97
12	15	0.11	15	7.1	6.3	1	23	1365	1388	1365	1388	0.97
13	15	0.95	1.4e+02	4.1	5.1	1	23	1447	1469	1447	1470	0.95
14	15	0.0062	0.9	11.0	0.5	3	23	1517	1537	1515	1537	0.96
15	15	0.001	0.15	13.4	4.8	1	23	1543	1565	1543	1565	0.99

Sequence Information

Coding Sequence: ATGATTAAGACGAGTAATGCACAAATCAAGGTGGAACAGAAGATGGAGAGACGTGCATCGTCGACATCTGAGTCATCGCTAGAGCCGATGGACCTCGGCAGGACCCCCAAAAAGTCGACAATGAGGAACAACGAATCAGCAACAATGTCCCCAGCGAAAACGGACTCAGTTAACAATGACTCAGAAACATACGAATCAGACAACGACGATTTCACCAATCGAATTAATTGCGAAAGGCATATTGAAATCGAGCCTAGCGAGAATCCCCATTCGCTCcgtaaaaaatttcgaattagcACACCGAACAGGAATAATAATAGcttgagtaaaaataataataataataacaaccacaataataataatagcgTTGTGGCGTACTCATCTTCGAAAGCTGGCAACGATACGACACAGTCGACGAATAACGAATCGGGCTTTATTGATGCCAGCAGCCATCATTTAAACTCTAGTCCAGAATGTGCTTCGGATCGCGATAGGGAGGACATGAAATATGTTTGCCCCATTTGCGAAGCGGTCTCAGCAACACCTCATGAATTTACAAATCACATTCGGTGTCACAACTATTCCTCAGGAGACTCTGAGAATTTCACGTGTCGCATTTGCTTAAAGGTCCTATCGTCAGCGTCGTCGCTGGACCGGCATGTGTTGGTCCACACGGGGGAGCGCCCGTTCAACTGTAAATATTGCCACCTGACCTTTACGACGAACGGCAACATGCATCGACATATGCGCACCCATAAGCAGCACCAACAACAGCGCACCGCCGGCTCAGGGGGTGGTAGTGCGGGTAGCGGTGGGGGTGGGGTCGGAAGTGGGGGTGGTAGCAGCGGTAGCAGTAGCGCCAGCAGCAATTGCGGACCGAGCAGCGGCAGCAGTGGCGGGGGCGGCGATGCCGAAAGTTACGAAAGCGATGGTTGCTCAACGGATTCAAACGCAAGCAgctcaaataataataataataacaacaataacaacTACAAGAGAAAGAGCACAGATGACGATAACGGAATTATAAAGAGGCGCATCAAGACGATAAACAACAACATAATCAATGAGAATGAGACGGAACCTCAGGTCGGGCATAAGTTCTGTTGCCCCATATGCAATCGAAGCGATTTTGCAAATATGCTCGCCCTAAGTGGTCACATGGATCGTGAGCACCCGGGCATCCCGCCTAAATGCAGACAGTGCGAGATCGTCTTTAAAACACCCAGGGCTCTCAATGGGCACAGGTGTGCTAGCAAAATGAATGTAACCCAGGGCTTTAGGGATATCGACTTTGTGGACTTTTCCAGCGAAAAGTTTCCACTAATAGCGAAGTCCCTCTGTGAGCAGACGATGCGGACACCGATCACAAGTCAGAAGTTCGAATGCCCCAAATGCTACCGCGCCTTTCCCTGCGCCAGCGCGGTTGATATTCACATTAAAGACTGCGGGGAATCTCCGCAGGACTATTCAATGCGGAAACGTGCCACCAGCGAGAGCTCCGATGAGGAGAATCGACGTGATGAATTTTTTGCTCACTTAGACCTTCAAAACAAGTCTGCTATGAGTTTGGCCAGTTCGATGTCATCGCCACGAACCTCTGAGAAGTCAGATGCAAAAACCGATCTAGAGAAGAGTCCACAGTTCAGTTATAAGCAGCAGGAGTCAAGAGATTTGGCCGATATACAGTCCATGCTCAATGTTACATCCACGCCTAGcagttttataagaaatttcgaaaattacgTGAATGCTCCTAGCAGCGAGCATGGCTATGGAAAGGACGAAGAAGAGGCTCAAGATGCCTTCACTTCTGAGTTccggaaaatgaaattacgcGGGGAGTTCCCCTGCAAGCTTTGCTCAGCAGTTTTTCCAAACTTGCGGGCTCTGAAAGGGCACAATCGCATTCATTTAAGTGCAGCTGGGGCTGGACCGTACCGGTGTAACATGTGCCCTTATTCTATTCATGATAAAGCCGCTCTTATTCGTCATATGCGCACTCATAACGGCGACAGACCTTTTGAGTGCGCTGTATGCAATTACGCCTTTACAACAAAAGCGAACTGCGAAAGGCACCTCAGAAATAGACACGCTAAAACGACTAGGGAGGAAGTGAAACGTGCCATTATTTACCATCCATCGGAGGATTCTAGTTGTGAGGATCCAATTAAGAAAATGCACCTCTTCTCGTCACCTGAATTTGATCAGGACGAGGAACAGTGTGCGCCGAAAGATCGGTCCACACCCTTGTCTCACTTGAAAGAGATGCTACAGTCAGAGAAGCCTCTGAAGATACAGGTAAAAAGTTTGGAGAAATtaatagacaaaaattataagaactACGAAGAGGCTGAGAAAAGATCTGTTGAACATGAGGAAAATAATGACTCCAATCGCCCCATAGACCTCAGTATGGATGTTCTTGATCTGAGTAAAAAGACCAAGCCAAATCCACCCTCTGAGGAGAAAGTGGAGCCTGAGCTTCTTTCAGAAACTACACCAAAGGTAGATATGTCCACTATAGagaaaaataaccaaatattGCTGGCCCAACAGCAGTTTATCAATGAAGCCCTACCTAAAATGGACCCGTCCCAGTACTTCCAATTGTCGCAACTTTACCGGAACTTTATGTTTTCTCCCCTACACCCATTTTTTCTCCCTAATGGTCTGATGCCAAACAATATAAATGATCTCAATAAATTCGCCCCTAACTTACTTATGAACTCAATGTTCAATGGTGACCATAGGGCTCCTCAGTCAAGCCCAGCAGCCGCTTCGAGTCAATGTCAGCCATCACCTCACAGTCATCAAGTTCCAGTCAGCAGCATTGAAAACTCTTTGCTAAAAGGAGGCACTGCGAGTGCGCAATTATTGCAAAAGTCTATGCCACCAACATCTCCGCAAATCAACATCCCTCGGCACCCGCATCTGGGCCAGCCCCCTCCACAACAACCGACTTTGGTACCGCCTAGTCAGAACACAGGTCCTGTAAAAATGGTAATCAAAAATGGAGTGCTGATGCCAAAGCAGAAGCAGAGGCGGTACAGAACGGAACGTCCCTTCGCTTGCGAGCACTGCTCTGCCCGATTCACTTTGAGATCGAATATGGAGCGGCACATTAAACAGCAACACCCTCAGTACTGGGCGCAGAGACAGAGAAGCGGGCACCACATCATGCGAAGAGGCACAAATTCGGCGGCTATGCCGCAGATATCATCAAGCACCTTGTCCCCGTCGGTGCCCACCATCCCAACGACTCATTTCAGTGCAATATCAGATCAAGTCAAGTATGCCATCCTCGCCCAGCAGTTAAAGACTAGAAAGGACACAGACATCCTGCAGCAGACCCTCTCTCAGGGAAGTAGCAGTTGTCATGGCAACGGTGGAGTTTTCAACAGTACAAATAATCAGTCCAACAACACCCATGCAAATGTGGAAGATGATGATCCAAAGCTAGTGATAGATGAGGATGAAGAAGCTGAAAATGATGAGCCCGATGATGAGACAAAGCCTGAGGATTTGTCGAAAAGCACTGACGCAATTCCTGCAGAAAATTCAGTTGCTAAAAAAGTGGCTGACTCTATCCTAGAACAGGCAATTCGAGCCAGTGCAAACTCAGTCAAGCACTCCTCCTCCCCAAAATGCTCTGAAGAGCGGGAGACTAAGGATTTTGGTTTAAAGATTGCAAGTAATATGATTGCTCGTGCGGAATCGGTGGGTAAGTACCTAAAAGAAGTAGCTAGCTCCCCTTTTAAAGATGAGTCCTCAGACTTAGCCTCAGTATCAAAATTGGTGGACAACGCTACCAATTCGATGTCTTTCAATAACTACTTCAGGCCCAGTGACCTGCCCAATCAAATGGAGCAAAGTGATGAGGAGGGTCTGGTGGCGTCCGGTAGCGCGTCCGAGAGCAATAACTCTGGCACAGAAGAGACCCACAGTACAGTCGGGCAagatcagaaaaaaaagtccGCTTACAGTTTGGCCCCGAATCGAGTTTCTTGCCCGTACTGTCAACGAATGTTCCCCTGGTCCAGTTCGTTGCGGCGCCACATTTTAACACACACTGGTCAAAAGCCGTTCAAATGCTCGCATTGTCCACTACTTTTCACGACAAAGAGCAATTGCGACCGGCACCTGCTGAGGAAGCACGGAAACGTCGAATCAGCTGTATCCCTATACGTTCCTATCGAAGACATTCCAGACCCTGTTCCTACTCCTAAAGCCATCGAGGAGCCTGAAAGCAAATCGGCGAACTCCTTGAACGTGAACCTCAACGTGCCCAACATTAAGCCAGAACCGATGATTTCGTCGTCAGACCTTCCGTTTAAGTGCCACCTCTGCGACGGCTCATTTTCCGAGAGGATCCAATGTTTGGATCACATAAAAATCCATCACGCTCAAGAGTTTGCCTTACTCCTTGCCAAGGGTGCCATCGATGCTGACGCGGACTACAATCACGTCCAAATGGCGGATGACGACGAGCGTAACGACGGCCGCGGAAAATATCCCGATTACGCCAATCGGAAAGTGATCTGTGCATTCTGTGTGCGCCGTTTCTGGTCCACAGAAGACCTTAGGCGGCACATGCGCACCCACTCTGGGGAGCGGCCCTTTCAGTGTGATATCTGCCTCAGGAAGTTCACGCTGAAGCACAGCATGCTGCGTCACATGAAAAAGCACAGCGGGAACCATCACAACAGTCAATCGAACGCAACAAACAGCGGCTCAGATATGTCCGACGATGAGCAGCCCTCCAGCATGATCCTGAGCAGCTCCTACCGCACCCACAAAATCCAGGAAATCCTGAGCAAAGCTGAGGCTCTAAGGAAGAGTCACCTTAGCGGCGAACAAAAGGACCTCATCGCCATGCACCCGTTTGTGAAATCCGAGGGGAACGGCGAAGATAACAATTCCGATCTGATTGGAAATCTGTTGGGCATCAGCGACCAGGGCATTCTAAATAAGCTCCTCTCCTCGGCGGACGAGGCAGCCAAGCTGCTGGGTGTCGAGAAGTAA
Protein Sequence: MIKTSNAQIKVEQKMERRASSTSESSLEPMDLGRTPKKSTMRNNESATMSPAKTDSVNNDSETYESDNDDFTNRINCERHIEIEPSENPHSLRKKFRISTPNRNNNSLSKNNNNNNNHNNNNSVVAYSSSKAGNDTTQSTNNESGFIDASSHHLNSSPECASDRDREDMKYVCPICEAVSATPHEFTNHIRCHNYSSGDSENFTCRICLKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQQRTAGSGGGSAGSGGGGVGSGGGSSGSSSASSNCGPSSGSSGGGGDAESYESDGCSTDSNASSSNNNNNNNNNNYKRKSTDDDNGIIKRRIKTINNNIINENETEPQVGHKFCCPICNRSDFANMLALSGHMDREHPGIPPKCRQCEIVFKTPRALNGHRCASKMNVTQGFRDIDFVDFSSEKFPLIAKSLCEQTMRTPITSQKFECPKCYRAFPCASAVDIHIKDCGESPQDYSMRKRATSESSDEENRRDEFFAHLDLQNKSAMSLASSMSSPRTSEKSDAKTDLEKSPQFSYKQQESRDLADIQSMLNVTSTPSSFIRNFENYVNAPSSEHGYGKDEEEAQDAFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPFECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDPIKKMHLFSSPEFDQDEEQCAPKDRSTPLSHLKEMLQSEKPLKIQVKSLEKLIDKNYKNYEEAEKRSVEHEENNDSNRPIDLSMDVLDLSKKTKPNPPSEEKVEPELLSETTPKVDMSTIEKNNQILLAQQQFINEALPKMDPSQYFQLSQLYRNFMFSPLHPFFLPNGLMPNNINDLNKFAPNLLMNSMFNGDHRAPQSSPAAASSQCQPSPHSHQVPVSSIENSLLKGGTASAQLLQKSMPPTSPQINIPRHPHLGQPPPQQPTLVPPSQNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRRGTNSAAMPQISSSTLSPSVPTIPTTHFSAISDQVKYAILAQQLKTRKDTDILQQTLSQGSSSCHGNGGVFNSTNNQSNNTHANVEDDDPKLVIDEDEEAENDEPDDETKPEDLSKSTDAIPAENSVAKKVADSILEQAIRASANSVKHSSSPKCSEERETKDFGLKIASNMIARAESVGKYLKEVASSPFKDESSDLASVSKLVDNATNSMSFNNYFRPSDLPNQMEQSDEEGLVASGSASESNNSGTEETHSTVGQDQKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDIPDPVPTPKAIEEPESKSANSLNVNLNVPNIKPEPMISSSDLPFKCHLCDGSFSERIQCLDHIKIHHAQEFALLLAKGAIDADADYNHVQMADDDERNDGRGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGNHHNSQSNATNSGSDMSDDEQPSSMILSSSYRTHKIQEILSKAEALRKSHLSGEQKDLIAMHPFVKSEGNGEDNNSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00937540; iTF_00718025; iTF_01049899; iTF_01461398; iTF_00936794; iTF_00424879; iTF_00628625; iTF_00455414; iTF_00454029; iTF_01256603;
90% Identity: iTF_00937540; iTF_00718025; iTF_01461398; iTF_00936794; iTF_01049899; iTF_00628625;
80% Identity: -