Basic Information

Insect: Neoitamus cyanurus
Gene Symbol: RREB1
Assembly: GCA_947538895.1
Location: OX384543.1:36114906-36120642[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0081 1.2 10.6 0.6 1 21 149 169 149 171 0.95

2 15 0.0013 0.19 13.1 0.1 1 23 181 203 181 203 0.98

3 15 1.7e-05 0.0025 19.0 7.5 1 23 209 231 209 231 0.98

4 15 8.6 1.3e+03 1.1 0.4 1 9 348 356 348 372 0.80

5 15 0.11 17 7.0 0.6 2 20 378 396 378 398 0.93

6 15 0.87 1.3e+02 4.2 0.4 1 20 441 460 441 462 0.80

7 15 0.0067 0.99 10.8 0.1 1 23 596 618 596 618 0.97

8 15 2.3e-05 0.0034 18.6 0.9 1 23 627 649 627 649 0.99

9 15 0.0006 0.088 14.1 2.0 1 23 655 678 655 678 0.97

10 15 0.00068 0.1 13.9 2.1 1 23 1004 1027 1004 1027 0.95

11 15 6.2e-05 0.0091 17.2 0.3 2 23 1322 1343 1321 1343 0.97

12 15 0.1 15 7.1 6.3 1 23 1349 1372 1349 1372 0.97

13 15 5.7 8.5e+02 1.6 7.6 1 23 1431 1453 1431 1454 0.95

14 15 0.0061 0.89 11.0 0.5 3 23 1501 1521 1499 1521 0.96

15 15 0.001 0.15 13.4 4.8 1 23 1527 1549 1527 1549 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0081	1.2	10.6	0.6	1	21	149	169	149	171	0.95
2	15	0.0013	0.19	13.1	0.1	1	23	181	203	181	203	0.98
3	15	1.7e-05	0.0025	19.0	7.5	1	23	209	231	209	231	0.98
4	15	8.6	1.3e+03	1.1	0.4	1	9	348	356	348	372	0.80
5	15	0.11	17	7.0	0.6	2	20	378	396	378	398	0.93
6	15	0.87	1.3e+02	4.2	0.4	1	20	441	460	441	462	0.80
7	15	0.0067	0.99	10.8	0.1	1	23	596	618	596	618	0.97
8	15	2.3e-05	0.0034	18.6	0.9	1	23	627	649	627	649	0.99
9	15	0.0006	0.088	14.1	2.0	1	23	655	678	655	678	0.97
10	15	0.00068	0.1	13.9	2.1	1	23	1004	1027	1004	1027	0.95
11	15	6.2e-05	0.0091	17.2	0.3	2	23	1322	1343	1321	1343	0.97
12	15	0.1	15	7.1	6.3	1	23	1349	1372	1349	1372	0.97
13	15	5.7	8.5e+02	1.6	7.6	1	23	1431	1453	1431	1454	0.95
14	15	0.0061	0.89	11.0	0.5	3	23	1501	1521	1499	1521	0.96
15	15	0.001	0.15	13.4	4.8	1	23	1527	1549	1527	1549	0.99

Sequence Information

Coding Sequence: ATGGAGAGACGTGCATCATCGACATCCGAGTCATCGCTAGAACCGATGGACCTCGGAAGGACCCCAAAGAAGTCAACGAGGAACAACGAGTCAGCCACTATGTCGCCAGCGAAAACAGACTCAGTGAACAATGATTCGGAGACGTACGAATCAGACAACGACGACTACGCCAATCGGATCAACTGCGAGAGGCATGTCGAAATCGAACCCAGCGAGAATCCCCATTCGTTGCGTAAAAAATTTCGAATTAGCACGCCAAATAGAAACAACAATAGCCTGAGCAGAAATAACAACAACAACAACAGTGTAGCGTACTCGTCATCGAAGACTGGCAACGACACAACGCAATCGACAAATAATGAGTCGGGCTTTGTCGATTCCAGCAGCCATCATTTAAACTCTAGTCTAGAATGTGGTTCAGAACGCGACCGAGAGGACATGAAGTATATCTGCCCCATTTGTGAGGCTGTCTCAGCTACACCTCATGAATTTACAAATCACATTCGATGTCACAACTATTCCTCGGGGGACTCTGAGAATTTCACGTGCCGCATTTGCTTAAAGGTCCTATCGTCAGCGTCATCGCTGGACCGACATGTACTGGTCCATACAGGGGAGCGCCCGTTCAACTGCAAATATTGTCACCTGACGTTCACGACGAATGGAAACATGCATCGTCACATGCGTACCCATAagcagcaccagcagcaacgcaccactggttcaggtggcggcagtgctggcagtggtggtggcgggggcggtagtgggggtgggagtagtggcagcagcagtagcagcaactgtggccccagcagcggtagcagcggcggtggtggtgatggcgaaagttatgaaagcgacggttgctcaacggactcaaacgccagcagctcaaataataacaataataataacaacaacaacaactacaagagaaagagcacggacgatgacaacggaataataaagagGCGCATCAAGACGATAAATAACAACATAATCAATGAGAACGAGACGGAGCACCAGACCAGCCACAAGTACTGCTGTCCAATGTGCAACCGGAGCGATTTCATTAGTATGCTCGCCCTAAGTGGCCACATGGATCGCGAGCATCCAGGCATTCCGCCCAAGTGCAGGCAGTGCGAGATCGTCTTTAAGACACCGAGGGCGCTGAGTGGGCACAGATGCGCGAACAAGATGAACATTACGCAGGGCTTTAGGGACATCGACTTTGTGGACTTTTCTAGTGAAAAGTTCCCACTAATAGCGAAGTCCTTGTGCGAGCAAACTATGCGAACACCGATCACTAGCCAGAAGTTCGAGTGCCCGAAATGCTATCGCGCTTTCCCATGTTCCAGCGCTGTAGATATCCACATTAAGGACTGTGGGGAATCTCCCCAGGACTACTCGATGCGAAAACGTGCCACAAGCGAAAGCTCCGACGAGGAGAATCGACGTGATGAATTTTTTGCTCACTTAGACCTTCAGAACAAGTCTGCTATGAGTTTGGCCAGTTCAATGTCATCTCCGCGAACTTCTGAGAAATCTGACGTAAAAACCGACTTGGAAAAGTCTCCCCAACTCACCTACAAGCAGCAAGAGTCAAGGGATTTGGCCGACATACAGTCTATGCTCAATGTAACGTCTACACCCAGCAGTTTCATAAGAAATTTTGAAAACTATGTGAATGCTCCAAGTAGTGAACACGGCTACGGGAAGGACGAGGAAGAGGCTCAAGACGCCTTTACCTCTGAGTTTCGGAAAATGAAACTGCGCGGGGAATTCCCTTGCAAACTTTGCTCAGCGGTGTTCCCCAATTTGCGAGCTCTGAAGGGGCACAATCGCATCCATTTGAGTGCAGCTGGGGCTGGACCATACCGTTGCAACATGTGCCCATACTCAATTCATGACAAAGCCGCTCTCATTCGTCACATGCGCACCCACAATGGCGACAGACCGTACGAATGTGCCGTCTGCAATTACGCCTTTACAACGAAAGCAAACTGTGAAAGGCATTTGAGAAATAGACACGCCAAAACTACCAGGGAGGAGGTGAAACGTGCCATTATCTACCATCCATCGGAGGATTCTAGCTGCGAAGATCCCATCAAAAAGATGCATTTATTCTCGTCGCCTGAATTCGACCAAGACGACGAGCAGAGTATGCCTAAGGATAGGTCAACACCTCTGTCCCACTTAAAAGAGATGCTGCAGTCTGAGAAGCCTCTCAAAATACAGGTAAAGAGCCTAGAGAAATTGATAGACAAAAATTATAAGAGCTACGAAGATGCTGAAAAAAGATCGGCTGAGCCTGAGGAGAACAACGACTCTAACCGACCTATAGACCTCAGCATGGATGTACTTGATCTGAGTAAGAAGTCGAAACCTAATCCTCCCTCTGAGGAGAAAGTAGAGCCTGAGACTCCCACAGAAGCACCCAAGGTCGATATGTCCACGATAGAGAAGAACAACCAAATATTGCTCGCTCAGCAGCAATTTATCAACGACGCCTTACCCAAGATGGACCCGTCCCAGTACTTCCAGCTATCGCAGCTCTACCGGAACTTTATGTTCTCTCCCTTGCACCCATTTTTTCTGCCTAATGGTCTGATGCCAAGCAATATTAATGATCTCAATAAATTCAACCCTAACTTGCTTATGAATTCAATGTTCAACAGCAACGGGGACCATAGGGCTCCACAGTCGAGTCCAGCAGCCGTTCCCAGTCAATGCCAGCCATCACCCCACAGTCAACAAGTCCCGGCCAGCACCATCGACAATTCCCTGCTGAAGGGCGGTCCTGCCAGTGCGCAATTGTTACAAAAGACATTGGCACCGACGTCTCCGCAAATCAACATCCCTCGCCACCCGCACTTAGGCCAGCCCCCTCCACAGCAACCAACTTTAGTTCCGCCTAGCCATAATACGGGCCCTGTGAAGATGGTGATCAAAAATGGGGTGCTAATGCCAAAGCAGAAGCAGAGACGGTACAGGACTGAACGTCCTTTCGCCTGCGAGCACTGCTCTGCCAGATTCACTTTGCGATCGAACATGGAGCGCCACATTAAGCAGCAACACCCCCAGTATTGGGCGCAGAGGCAGAGGAGCGGGCACCATATCATGCGACGAGGCACAAACTCGACAGCGATGCCACAGATCTCATCAAGCACCCTACCCTCCTCGGTCCCCAGTATTCCAACAACTCACTTCAGTGCAATATCGGATCAAGTCAAGTACGCCATCCTTGCCCAGCAGTTGAAAACCAGAAAGGATACAGATATTCTGCAGCAGACGCTCTCTCAAGGCAGTAGCAGTAGCCACGGAAATGGTGGGGTTTTTAACAGTACAAACAACCAACCCAGCAATGCCCATTCCAATGTGGAAGACGATGATCCAAAGCTGGTAATAGACGAGGACGATGAAGCTGAGGCTGAGGCTGAAGCCGAGGCCGAGGAGCTTGAGGATGAATCGAAACCTGAGGACTTATCCAGAAGCACTGAAGTCGCCCAGGAGAACTCAGCTGCCAAAAAGGTGGCTGACTCCATCCTGGAACAGGCAATTAGAGCCAGTGGAAATTCAGTCAAACAATCCCCATCTTCAAAGTGCTCTGAAGATCGGGAGACAAAGGACTTTGGTCTGAAGCTTGCCAGCAATATGATAGCCCGTGCGGAGTCGGTGGGCAAATATCTAAAAGAAGTGGCTAGCTCTCCTTTCAAGGATGAGTCCTCAGACCTTGCCTCAGTCTCAAAACTGGTTGACAACGCCACTAACTCGATGTCCTTCAACAATTACTTCCGGCCGAGCGACTTGCCCAATCAAATGGAGCAAAGTGACGAGGAGGGGCTGGTAGCTTCTGGTAGCGCTTCCGAAAGTAACAACTCTGGCACAGAGGAGACCCAGAGCACGATAGGGCAAGATCAGAAAAAAAAGTCCGCATACAGCTTGGCACCCAATCGAGTTTCTTGCCCGTACTGCCAGCGGATGTTCCCCTGGTCCAGCTCCTTGAGACGGCATATCTTAACTCACACTGGTCAAAAACCGTTTAAGTGCTCCCACTGTCCACTCCTTTTCACGACAAAGAGCAACTGTGACCGACACTTGCTGAGGAAGCACGGAAACGTGGAATCAGCAGTGTCCCTTTACGTTCCTATTGAAGACATTCCAGACCCTGTTCCTACTCCAAAGACAGTTGAGGAAGCTGAAACCAAACAGGCGAATTCCCTAAATGTGAACCTCAACGTACCCAACATCAAGCCAGAGCCCATGATCTCCTCCTCAGATTTGCCGTTCAAGTGCCACCTCTGCGACGGCTCCTTTTCTGAGAGGATCCATTGCTTGGATCACATTAAGCTCCACCACGCTCAAGAATTTGCCTTACTCCTTGCCAAGGGCGCCATCGACGCTGAAGCCGACTACAACCATGTCCAAATGGCTGATGACGATGATCGGAATGACGGTCGTGGGAAGTACCCGGACTACGCCAATCGGAAGGTTATTTGCGCCTTCTGCGTGCGCCGATTTTGGTCCACGGAAGATCTCCGGCGGCACATGCGCACACACTCCGGGGAGCGGCCATTTCAGTGCGATATCTGCCTCAGAAAATTTACTCTGAAGCACAGCATGCTTCGTCACATGAAGAAGCACAGCGGTAGTCACCACAACAGCCAGTCAAATGCAACAAACAGTGGCTCAGACATGTCCGACGACGAACAGCCGTCCAGCATGGTCCTGAGCAGCTCATACCGCAGCCACAAGATTCAGGAGATCCTAAGCAAAGCCGAAGCGTTAAGGAAGAGTCACTTGGGCGGTGACCACAAAGACATCATTGCTATGCACCCTTTCGTGAAATCTGAAGGGAATGGTGAAGACAACAACTCCGATCTCATCGGAAATCTGCTGGGCATCAGCGATCAGGGCATTCTCAACAAGCTCCTCTCTTCAGCTGACGAGGCGGCCAAGCTGCTGGGTGTCGAGAAGTAA
Protein Sequence: MERRASSTSESSLEPMDLGRTPKKSTRNNESATMSPAKTDSVNNDSETYESDNDDYANRINCERHVEIEPSENPHSLRKKFRISTPNRNNNSLSRNNNNNNSVAYSSSKTGNDTTQSTNNESGFVDSSSHHLNSSLECGSERDREDMKYICPICEAVSATPHEFTNHIRCHNYSSGDSENFTCRICLKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQQRTTGSGGGSAGSGGGGGGSGGGSSGSSSSSNCGPSSGSSGGGGDGESYESDGCSTDSNASSSNNNNNNNNNNNYKRKSTDDDNGIIKRRIKTINNNIINENETEHQTSHKYCCPMCNRSDFISMLALSGHMDREHPGIPPKCRQCEIVFKTPRALSGHRCANKMNITQGFRDIDFVDFSSEKFPLIAKSLCEQTMRTPITSQKFECPKCYRAFPCSSAVDIHIKDCGESPQDYSMRKRATSESSDEENRRDEFFAHLDLQNKSAMSLASSMSSPRTSEKSDVKTDLEKSPQLTYKQQESRDLADIQSMLNVTSTPSSFIRNFENYVNAPSSEHGYGKDEEEAQDAFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDPIKKMHLFSSPEFDQDDEQSMPKDRSTPLSHLKEMLQSEKPLKIQVKSLEKLIDKNYKSYEDAEKRSAEPEENNDSNRPIDLSMDVLDLSKKSKPNPPSEEKVEPETPTEAPKVDMSTIEKNNQILLAQQQFINDALPKMDPSQYFQLSQLYRNFMFSPLHPFFLPNGLMPSNINDLNKFNPNLLMNSMFNSNGDHRAPQSSPAAVPSQCQPSPHSQQVPASTIDNSLLKGGPASAQLLQKTLAPTSPQINIPRHPHLGQPPPQQPTLVPPSHNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRRGTNSTAMPQISSSTLPSSVPSIPTTHFSAISDQVKYAILAQQLKTRKDTDILQQTLSQGSSSSHGNGGVFNSTNNQPSNAHSNVEDDDPKLVIDEDDEAEAEAEAEAEELEDESKPEDLSRSTEVAQENSAAKKVADSILEQAIRASGNSVKQSPSSKCSEDRETKDFGLKLASNMIARAESVGKYLKEVASSPFKDESSDLASVSKLVDNATNSMSFNNYFRPSDLPNQMEQSDEEGLVASGSASESNNSGTEETQSTIGQDQKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDIPDPVPTPKTVEEAETKQANSLNVNLNVPNIKPEPMISSSDLPFKCHLCDGSFSERIHCLDHIKLHHAQEFALLLAKGAIDAEADYNHVQMADDDDRNDGRGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGSHHNSQSNATNSGSDMSDDEQPSSMVLSSSYRSHKIQEILSKAEALRKSHLGGDHKDIIAMHPFVKSEGNGEDNNSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01184049;
90% Identity: iTF_01184049;
80% Identity: -