Basic Information

Insect: Dioctria linearis
Gene Symbol: RREB1
Assembly: GCA_963930735.1
Location: OZ005742.1:27734831-27740292[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.06 28 8.0 0.6 2 21 183 202 183 204 0.94

2 15 0.00028 0.13 15.3 0.2 1 23 214 236 214 236 0.98

3 15 2e-05 0.0093 19.0 7.5 1 23 242 264 242 264 0.98

4 15 9.4 4.4e+03 1.1 1.0 1 23 381 405 381 405 0.73

5 15 0.062 29 7.9 5.0 2 23 411 432 411 432 0.96

6 15 1.3 6.3e+02 3.8 0.3 1 20 474 493 474 495 0.76

7 15 0.0079 3.7 10.8 0.1 1 23 630 652 630 652 0.97

8 15 2.7e-05 0.013 18.5 0.9 1 23 661 683 661 683 0.99

9 15 0.0007 0.33 14.1 2.0 1 23 689 712 689 712 0.97

10 15 0.0008 0.38 13.9 2.1 1 23 1043 1066 1043 1066 0.95

11 15 7.2e-05 0.034 17.2 0.3 2 23 1376 1397 1375 1397 0.97

12 15 0.12 57 7.0 6.3 1 23 1403 1426 1403 1426 0.97

13 15 1.2 5.7e+02 3.9 5.9 1 23 1487 1509 1487 1510 0.95

14 15 0.0071 3.3 10.9 0.5 3 23 1557 1577 1555 1577 0.96

15 15 0.0011 0.53 13.4 4.8 1 23 1583 1605 1583 1605 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.06	28	8.0	0.6	2	21	183	202	183	204	0.94
2	15	0.00028	0.13	15.3	0.2	1	23	214	236	214	236	0.98
3	15	2e-05	0.0093	19.0	7.5	1	23	242	264	242	264	0.98
4	15	9.4	4.4e+03	1.1	1.0	1	23	381	405	381	405	0.73
5	15	0.062	29	7.9	5.0	2	23	411	432	411	432	0.96
6	15	1.3	6.3e+02	3.8	0.3	1	20	474	493	474	495	0.76
7	15	0.0079	3.7	10.8	0.1	1	23	630	652	630	652	0.97
8	15	2.7e-05	0.013	18.5	0.9	1	23	661	683	661	683	0.99
9	15	0.0007	0.33	14.1	2.0	1	23	689	712	689	712	0.97
10	15	0.0008	0.38	13.9	2.1	1	23	1043	1066	1043	1066	0.95
11	15	7.2e-05	0.034	17.2	0.3	2	23	1376	1397	1375	1397	0.97
12	15	0.12	57	7.0	6.3	1	23	1403	1426	1403	1426	0.97
13	15	1.2	5.7e+02	3.9	5.9	1	23	1487	1509	1487	1510	0.95
14	15	0.0071	3.3	10.9	0.5	3	23	1557	1577	1555	1577	0.96
15	15	0.0011	0.53	13.4	4.8	1	23	1583	1605	1583	1605	0.99

Sequence Information

Coding Sequence: ATGATTAAAGCAAACAATGCACAACATAAAATGGATCAACAAATGGAGAGACGATCATCTTCAACATCAGAATCATCCTTAGAACCTATGGATTTGGGTAGGACACCAAAAAAATCCCGAAGCAATGAATCAGCAGTATCGACTTTCTCATCATCATCAACAATAGCGAATTCATTAAATAATGATGATTCAGATAATTACGAATCAGACAATGATGCTGATTATAGAAGTACAATTAATCGAATTACTTGCGAGAGTCATGTAGAAATTGAGCCAAGTGATAATCCACATTCATTACGCAAGAAATTTCGAATTAGTACAccaaataagaataataatagcttgaacaaaaataataataataataataacaacaacaataataactcCAGCAGCACGATATATACAAAATTATCTAATGATACAACACAATCAGTAAGTGGTGATCGTACAAATAATGAATCCGGATTTGTTGATACCAGCAGCCATCACTTAAATTCTAGTCCAGAATCTGGTACTGAACGAGAACGAGATGATATGAAACGAGTTTGTCCAATATGCGAAGTTGTTTCAGCTACTGCTCACGAATTTACAAATCACATTCGATGTCACAATTATTCTTCAGGCGATTCAGAGAATTTTACATGTAGAATTTGTTCGAAGGTGTTATCATCCGCATCATCTTTAGATCGTCATGTGCTGGTCCATACGGGAGAGCGTCCATTTAATTGCAAATATTGTCACCTGACGTTCACAACGAATGGCAATATGCATCGGCATATGCGAACTCATAAACAACATCAGCAACAACGTAGCACCGCTGGTATGATAGGCAGCAGTTGTAGTATAGGTGGTGGAGGTGGAGGTGGAGGCGGCAGCAGTAGCATCAGTAATAGTGGGCCAAGTAGTGGCAGTAGCGGTGGCGGTGGTGATGGCGAAAGTTATGAAAGTGATGGTTGCTCAACAGACTCAAATGCCAGTagctcaaataataataataataacaacaacaacaataataataacaattacaAGCGCAAATGCGCTGGCGATGATAACGGAATAATAAAGAGACGCATGAAAACCATCAACAACAATATAATCAATGAAAATGAGACCGAACCCCAAACCGGACTGAAATATTGTTGTCCGGTATGCAATCGAAATGACTTCATTAGTATGCTTACTCTGAGTACCCACATGGATCGTGAACATCCAAACATTCCAGCAAAATGTCGACAATGTGAGATCGTTTTTAAGTCACATAAGACTTTAAATGCTCACAGGTGTGCGCACAAAGTGAACATAACTCAGGGCTTTAAAGATATAACTTTTGTGGACTTTTCTAGTGAAAAGTTTCCACTAATAGCGAAATCTTTATGCGAACAGACAATAAGAACACCAATAACAAATCAAAAATTCGAATGTCCAAAATGTTATAGGGCTTTTCCATGTGCCAGTGCCGTTGATATTCATATCAAAGACTGCGGAGAATCTCCGCAAGACTACTCTATACGAAAACGTGCAACAAGTGAAAGTTCAGATGAGGAAAATCGACGCGATGAATTTTTTGCTCATTTAGATCTACAGAACAAGTCTGCAATGAGTTTGGCTAGTTCAATGTCATCTCCACGTACTTCAGAAAAGTCTGATATCAAAGCGGATCCAGATAAATCGCCCGAATCAAATTATAATAAACAGCAAGAATCAAGGGACTTAGCAGATATTCAATCGATTTTGAATGTGACATCATCATCAAGCAGTTTTATACGAAATTTTGAGAAATGTGTTAATACACCGAGCAGTGATTACAGTTACGGAAAAGACGAAGAAGAAGCTCAAGATGCATTCACATCAGAGTTCCGAAAAATGAAGTTACGTGGAGAATTTCCATGCAAACTGTGTTCAGCTGTTTTCCCCAATTTACGTGCATTAAAAGGTCATAATAGAATTCACTTGAGTGCAGCTGGGGCTGGACCATATCGCTGTAATATGTGCCCATATTCTATACATGATAAAGCCGCTCTCATTCGCCATATGCGTACTCATAACGGCGACAGACCATACGAATGTGCTGTTTGTAATTATGCCTTTACCACAAAAGCCAACTGTGAAAGGCACCTAAGAAATAGACATGCCAAAACAACTCGAGATGATGTGAAACGTGCCATTATTTATCATCCATCTGAAGATTCAAGTTGCGAAGATCCCATTAAAAAAATGCATCTATTTTCATCGCCTGAACTTGATCAGGATGATGAACATAGCATTCCCAAAGATAGATCAACGCCTGTATCGCATTTAAAAGAAATGTTGCAGTCAGAGAAGCCAATTAAAATTCAAGTGAAAAGTCTGGAAAAATTGATTGATACAACTTTCAGTAGCTACGATGAACAAGAAAAAGAGACTTTAGAATTGGAAGAAAATATTGATTCTAATCGACCTATTGATCTCAGTATGGATGTTttggatttaagtaaaaagtcAAAATCGAATCCACCGGTTGCTCAAGAAGAAAGAATCGAATCAGAGCCACCGCCAGAGCAGCCAAAAGTTGATATAGCAATGATTgagaaaaataatcaaattttacTTGCTCAACAGCAGCTTTTAAATGAAGCCTTGCCGAAAATGGATCCTTCTCATTATTTCCAGTTATCTCAACTCTATCGGAATTTGGTATTTTCTCCTCTGCATCCATTCTTTATGCAAAATAGTTTAATGCCACCGAACAATATCAATGATCTCAATAAATACGGTCCGAATATGTTAATGAATTCAATGTTCAGTGGTAGTATTGCGGAACCTAGAGTGAATCCACAAAATCCGAATAACGTTGTTTCCAGCCAATGTAAACCTCCGCCACATTCGCAACAAATTCAAAGCAATGTAATCGACAATTCTATGCTGAAAAGTATACCACAAAATGCGCAGATTTTACAAAAGTCTTTACCGCCTACTTCTTCGCAGATAACAATTCCACGTCATCCTCATCTGAGCCAGCCTCCACCACAGTCTCCGCTGGTGGCGCCAAGCCATCAAAATACTGGCCCTGTTAAAATGGTCATAAAAAATGGTGTGCTAATGCCAAAACAAAAGCAACGACGCTACAGAACTGAACGTCCATTTGCATGTGAACATTGCTCAGCTCGATTTACTCTTCGTTCGAATATGGAACGTCACATAAAGCAACAACATCCACAATATTGGGCTCAGAGACAGAGAAGCGGTCACCATGTAGTCCGACGAGGCAGTAACACAGCGTCAATACCACAGCAGATGTCATCAAGCTCACTTCCACCAACTGTCCCCACCATTCCTCCTCCACACTTTAGTGCAATATCTGATCAAGTTAAATATGCAATTCTGGCGCAACAATTAAAAGCCAGAAAGGATACAGATATTTTGCAACAGACTCTATCTCAAGGTAATGGCAATAATCCTGGCAATAGTGGCAATTTCTACAGTACAAATAGCTCTAGCAGCAAtatcaacatcaacaacaacagcaacaacaacatcaatAAAAGCACCATTAACACAAGCGTCGAAGATGACGATCCCAAACTTGTTATAGATGAAGATGACGAAGATATTGAAAACAACGAGGAAACCGAAGATGAATCTAAGCCTGAAGATCtttcaaaaaactttgaaaatatccAAGGTAATTCTGTTGCCAAAAAAGTTGCAGACTCCATTTTAGAGCAAGCAATTAGAGCTAGTACTAAACCAGCTAAACAGCTACTATCACCAACTAGTAGCAGCAGCACAGAAGTCAGAGAAAGTAAAGATTTCAATCTCAAGATTGCCAACAATATGATAGCACGAGCTGAATCCGTTGGAAAATATCTAAAAGAAGTTGCCAGCTCTCCATTTAAGGATGAATCTTCAGATCTTGTCTCAGTTTCGAAACTTGTCGATAATGCCACAAATTCAATGTCATTTAATAATTACTTCCGGCCAAGTGACTTGCCTAATCAAATGGAACAGAGTGATGAAGAAGGTCTTGTCGCCTCAGGTAGTGCATCAGAAAGCAATAATTCTGGAGCTGAAGAGACACAAAGTACAATAGGACAAGATCAAAAGAAAAAATCAGCATACAGTCTTGCTCCGAATCGAGTATCATGTCCTTACTGCCAGAGAATGTTTCCATGGTCAAGCTCATTGCGTCGACATATCTTAACACATACTGGACAAAAGCCGTTTAAATGCTCTCATTGCCCCCTATTATTCACAACGAAAAGTAATTGTGATCGCCATCTGTTGAGAAAACATGGAAATGTTGAATCTGCAGTATCACTATATGTTCCTATTGATGACATTCCAGATCCTGTTCCTGCTCCAAAATCTATCGATGAACAACCTGATCAAACCAAACAAATCAATCCTgtgaatataaatttaaatgttCCAAACGTTAAGCCAGAACCGATGATATCCTCTTCAGACCTGCCATTCAAGTGCCACCTCTGCGATAGTTCATTTTCCGAACGAATACAATGTTTGGATCACATTAAAGTTCATCATGCTCAAGAGTTTGCTTTACTTCTAGCAAAAGGTGCCATCGATGCTGATGCCGATTACAATCATTCTCAATTAGCCGATGACGATGATAGAAATGATGGTCGCGGAAAATACCCGGACTATGCTAATCGAAAAGTGATTTGTGCATTTTGTGTACGACGATTCTGGTCAACAGAGGATTTGAGACGACATATGCGAACACATTCCGGCGAACGTCCATTTCAATGTGAAATTTGTCTTAGGAAATTTACCCTAAAGCATAGCATGCTTCGTCACATGAAGAAACACAATGGAAGTCATCATAATAGCCAATCAAATACAGCAAATAGTGGATCAGATATGTCTGATGATGAGCAACCACCATCCAGTATGGTCCTTTCCAACTCAATTAGAAGTCATAAAATCCAAGAGATACTAAGTAAAGCAGAAGCATGGAGGAAAACACATTTGAGCGGAGAACAAAAGGAAAACATCGCCTTGCATCCGTTTATAAAATCCGAAGGAAACGGTGAAGATAACAATTCTGATCTCATCGGGAATCTGCTGGGCATCAGTGACCAGGGAATTCTAAACAAACTTTTATCTTCAGCTGATGAAGCAGCAAAACTTTTGGGTGTTGAGAAATAA
Protein Sequence: MIKANNAQHKMDQQMERRSSSTSESSLEPMDLGRTPKKSRSNESAVSTFSSSSTIANSLNNDDSDNYESDNDADYRSTINRITCESHVEIEPSDNPHSLRKKFRISTPNKNNNSLNKNNNNNNNNNNNNSSSTIYTKLSNDTTQSVSGDRTNNESGFVDTSSHHLNSSPESGTERERDDMKRVCPICEVVSATAHEFTNHIRCHNYSSGDSENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQQRSTAGMIGSSCSIGGGGGGGGGSSSISNSGPSSGSSGGGGDGESYESDGCSTDSNASSSNNNNNNNNNNNNNNYKRKCAGDDNGIIKRRMKTINNNIINENETEPQTGLKYCCPVCNRNDFISMLTLSTHMDREHPNIPAKCRQCEIVFKSHKTLNAHRCAHKVNITQGFKDITFVDFSSEKFPLIAKSLCEQTIRTPITNQKFECPKCYRAFPCASAVDIHIKDCGESPQDYSIRKRATSESSDEENRRDEFFAHLDLQNKSAMSLASSMSSPRTSEKSDIKADPDKSPESNYNKQQESRDLADIQSILNVTSSSSSFIRNFEKCVNTPSSDYSYGKDEEEAQDAFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSSCEDPIKKMHLFSSPELDQDDEHSIPKDRSTPVSHLKEMLQSEKPIKIQVKSLEKLIDTTFSSYDEQEKETLELEENIDSNRPIDLSMDVLDLSKKSKSNPPVAQEERIESEPPPEQPKVDIAMIEKNNQILLAQQQLLNEALPKMDPSHYFQLSQLYRNLVFSPLHPFFMQNSLMPPNNINDLNKYGPNMLMNSMFSGSIAEPRVNPQNPNNVVSSQCKPPPHSQQIQSNVIDNSMLKSIPQNAQILQKSLPPTSSQITIPRHPHLSQPPPQSPLVAPSHQNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHVVRRGSNTASIPQQMSSSSLPPTVPTIPPPHFSAISDQVKYAILAQQLKARKDTDILQQTLSQGNGNNPGNSGNFYSTNSSSSNININNNSNNNINKSTINTSVEDDDPKLVIDEDDEDIENNEETEDESKPEDLSKNFENIQGNSVAKKVADSILEQAIRASTKPAKQLLSPTSSSSTEVRESKDFNLKIANNMIARAESVGKYLKEVASSPFKDESSDLVSVSKLVDNATNSMSFNNYFRPSDLPNQMEQSDEEGLVASGSASESNNSGAEETQSTIGQDQKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIDDIPDPVPAPKSIDEQPDQTKQINPVNINLNVPNVKPEPMISSSDLPFKCHLCDSSFSERIQCLDHIKVHHAQEFALLLAKGAIDADADYNHSQLADDDDRNDGRGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGSHHNSQSNTANSGSDMSDDEQPPSSMVLSNSIRSHKIQEILSKAEAWRKTHLSGEQKENIALHPFIKSEGNGEDNNSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01184049;
90% Identity: iTF_00455414;
80% Identity: -