Basic Information

Insect: Dioctria rufipes
Gene Symbol: RREB1
Assembly: GCA_963924295.1
Location: OZ002742.1:26217764-26223201[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.059 27 8.0 0.6 2 21 182 201 182 203 0.94

2 15 0.00028 0.13 15.3 0.2 1 23 213 235 213 235 0.98

3 15 1.9e-05 0.009 19.0 7.5 1 23 241 263 241 263 0.98

4 15 9.3 4.3e+03 1.1 1.0 1 23 377 401 377 401 0.73

5 15 0.061 28 8.0 5.0 2 23 407 428 407 428 0.96

6 15 1.3 6.1e+02 3.8 0.3 1 20 470 489 470 491 0.76

7 15 0.0078 3.6 10.8 0.1 1 23 626 648 626 648 0.97

8 15 2.7e-05 0.012 18.5 0.9 1 23 657 679 657 679 0.99

9 15 0.00069 0.32 14.1 2.0 1 23 685 708 685 708 0.97

10 15 0.00079 0.37 13.9 2.1 1 23 1037 1060 1037 1060 0.95

11 15 7.2e-05 0.033 17.2 0.3 2 23 1364 1385 1363 1385 0.97

12 15 0.12 56 7.0 6.3 1 23 1391 1414 1391 1414 0.97

13 15 1.2 5.5e+02 3.9 5.9 1 23 1475 1497 1475 1498 0.95

14 15 0.007 3.2 10.9 0.5 3 23 1545 1565 1543 1565 0.96

15 15 0.0011 0.51 13.4 4.8 1 23 1571 1593 1571 1593 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.059	27	8.0	0.6	2	21	182	201	182	203	0.94
2	15	0.00028	0.13	15.3	0.2	1	23	213	235	213	235	0.98
3	15	1.9e-05	0.009	19.0	7.5	1	23	241	263	241	263	0.98
4	15	9.3	4.3e+03	1.1	1.0	1	23	377	401	377	401	0.73
5	15	0.061	28	8.0	5.0	2	23	407	428	407	428	0.96
6	15	1.3	6.1e+02	3.8	0.3	1	20	470	489	470	491	0.76
7	15	0.0078	3.6	10.8	0.1	1	23	626	648	626	648	0.97
8	15	2.7e-05	0.012	18.5	0.9	1	23	657	679	657	679	0.99
9	15	0.00069	0.32	14.1	2.0	1	23	685	708	685	708	0.97
10	15	0.00079	0.37	13.9	2.1	1	23	1037	1060	1037	1060	0.95
11	15	7.2e-05	0.033	17.2	0.3	2	23	1364	1385	1363	1385	0.97
12	15	0.12	56	7.0	6.3	1	23	1391	1414	1391	1414	0.97
13	15	1.2	5.5e+02	3.9	5.9	1	23	1475	1497	1475	1498	0.95
14	15	0.007	3.2	10.9	0.5	3	23	1545	1565	1543	1565	0.96
15	15	0.0011	0.51	13.4	4.8	1	23	1571	1593	1571	1593	0.99

Sequence Information

Coding Sequence: ATGATTAAAGCAAACAATGCACAACATAAAATGGATCAACAAATGGAGAGACGATCATCTTCAACATCAGAATCATCCTTAGAGCCTATGGATTTGGGCAGGACACCAAAAAAAGCCCGAAGTAATGAATCAGCAGTATCAACTTTCTCATCATCATCAACAATAGCGAATTCATTGAATAATGATGATTCAGATAATTACGAATCAGACAATGATGGAGATTATAGAAGTTCAATTAATCGAATTACCTGCGAGAGTCATGTAGAAATTGAGCCAAGTGATAATCCGCATTCATTACGCAAGAAATTTCGAATTAGTACAccaaataagaataataatagcttgaacaaaaataataataataacaataacaacaacaatattaacTCCAGCACGatatatacaaaattatctaaTGATACAACACAATCAGTCAGTGGGGATCGTACAAATAATGAATCCGGATTTGTTGATACCAGCAGCCATCACTTAAATTCTAGTCCAGAATCTGGTACTGAACGAGAACGAGATGATATGAAACGCGTTTGTCCAATATGCGAGGTTGTTTCAGCTACTGCTCATGAATTTACAAATCACATTCGATGTCACAACTATTCTTCAGGCGATTCAGAGAATTTTACATGTCGAATTTGTTCGAAGGTGTTATCATCCGCTTCATCTTTAGATCGTCATGTGCTGGTCCATACGGGAGAGCGTCCATTTAATTGCAAATATTGTCACCTGACATTCACAACGAATGGTAATATGCATCGGCATATGCGAACTCATAAACAACATCAGCAGCAGCGTAACACCGCTGGTATGATAGGCGGCGGCTGTAGTATAGGTGGTGGAGGTGGTGGCGGAGGCAGTAGTAGCATCAGTAATAGTGGGCCAAGTAGTGGCAGCAGCGGTGGCGGTGGTGATGGCGAAAGTTATGAAAGTGATGGTTGCTCAACAGACTCAAATGCCAGTAgctcaaataataataataacaacaacaataataataacaattataagCGCAAATGCGCAGGCGATGATAACGGAATAATAAAGAGACGCATGAAAACCATCAACAACAATATAATCAATGAAAATGAGACCGAACCCCAAACCGGACTGAAATATTGTTGTCCGGTATGCAATCGAAATGACTTCATTAGTATGCTTACTCTGAGTACCCACATGGATCGTGAACATCCAAACATTCCAGCAAAATGTCGACAATGTGAGATCGTTTTTAAGTCACATAAGACTTTAAATGCTCACAGGTGTGCGCACAAGGTGAACATAACTCAGGGCTTTAAAGATATAACTTTTGTGGATTTTTCTAGTGAAAAGTTTCCACTAATAGCGAAATCTTTATGCGAACAGACAATAAGAACACCAATAACAAATCAAAAATTTGAATGTCCAAAATGTTATAGGGCTTTTCCATGTGCCAGTGCCGTTGATATTCATATCAAAGACTGCGGAGAATCTCCGCAAGACTACTCTATACGAAAACGTGCAACAAGTGAAAGTTCAGATGAGGAAAATCGACGCGATGAATTTTTTGCTCATTTAGATCTACAGAACAAGTCTGCAATGAGTTTGGCTAGTTCAATGTCATCTCCGCGTACTTCAGAAAAGTCTGATATCAAAGCGGATCCAGATAAATCGCCCGAATCAAATTATAATAAACAGCAAGAATCAAGGGACTTAGCAGATATTCAATCGATTTTGAATGTGACATCATCCTCGAGCAGTTTTATACGAAATTTTGAGAAATGTGTTAATACACCGAGCAGTGATTACAGTTACGGAAAAGACGAAGAAGAAGCTCAAGATGCATTCACATCAGAGTTTCGAAAAATGAAGTTACGTGGAGAATTCCCGTGCAAACTGTGCTCAGCTGTTTTTCCCAATTTACGTGCACTAAAAGGTCATAATAGAATTCACTTGAGTGCAGCTGGGGCTGGACCATATCGCTGTAATATGTGCCCATATTCTATTCATGATAAAGCCGCTCTAATTCGTCATATGCGTACTCATAACGGTGACAGACCATACGAATGTGCTGTTTGTAATTATGCCTTTACCACGAAAGCCAACTGTGAAAGGCACCTAAGAAATAGACATGCCAAAACAACTCGAGATGATGTGAAACGTGCCATTATCTATCATCCATCTGAAGATTCAAGTTGCGAAGATCCCATTAAAAAAATGCATCTATTTTCATCGCCTGAGCTTGATCAGGATGATGAACATAGCATTCCTAAAGATAGATCAACGCCTGTATCTCATTTAAAAGAAATGTTGCAGTCAGAGAAGCCAATTAAAATTCAAGTGAAAAGTCTAGAAAAATTGATTGATACAACTTTCAGCAGCTACGATGAGCAGGAAAAAGAGTCTTTAGAATTAGAAGAAAATATTGATTCTAATCGACCTATTGATCTCAGTATGGATGTTTTGGATTTAAGTAAAAAGTCAAAATCGAATCCACCGCTTGCTCAAGAAAGAATCGAATCAGAAGCACCGCCAGAGCAGCCAAAAGTTGATATAGCaatgattgagaaaaataatcaaattttacTTGCTCAACAGCAGCTTTTAAATGAAGCCTTGCCGAAAATGGATCCTTCTCACTATTTCCAGTTATCACAACTCTACCGGAATTTGGTATTTTCTCCTCTGCATCCATTCTTTATGCAAAATAATTTAATGCCACCGAACAATATCAATGATCTCAATAAATACGGTCCGAATATGTTAATGAATTCAATGTTCAGTGGTAGTGCTACGGAGCCTAGAGTGAATCCACAAAATCCGAATAACGTTTCCAGCCAATGTAAACCTCCGCCACATTCGCAACAAATTCAAAGCAATGTAATCGATAATTCTATGCTTAAAACCATACCACAAAATGCGCAGATTTTACAAAAGTCTTTACCGCCTACGTCTTCGCAGATAACAATTCCACGTCATCCTCATCTGAGCCAGCCTCCACCACAGTCTCCACTGGTGCCGCCAATCCATCAAAATACTGGCCCTGTTAAAATGGTCATAAAAAATGGTGTACTAATGCCAAAACAAAAGCAACGACGCTACAGAACTGAACGTCCATTTGCATGTGAACATTGCTCAGCCCGATTTACTCTTCGTTCGAATATGGAACGTCACATAAAGCAACAACATCCACAATATTGGGCTCAGAGGCAGAGAAGCGGTCACCATGTAGTCCGACGAGGCAGTAACACAGCGTCAATACCACAGCAGATGTCATCAAGCTCACTTCCACCAACTGTCCCCACCATTCCTCCTCCACACTTTAGTGCAATATCTGATCAAGTTAAATATGCAATTCTGGCGCAACAATTAAAAGCCAGAAAGGATACAGATATTTTGCAACAGACTCTATCTCAAGGTAATGGCAATAATCTTGGCAACAGTGGCAATTTCTACAGTACAAATAGCTCTATCAGCaatatcaacaacaacaacaataaaagcaCCATTAATACAAGCGTCGAAGATGATGATCCCAAACTTGTTATAGATGAAGATGACGAAGATATTGAAAACAACGAGGAAACTGAAGATGAATCTAAGCCTGAAGATctttcaaaaaactttgaaaatatccAAGGCAATTCTGTTGCCAAAAAAGTTGCAGACTCAATTTTAGAGCAAGCAATTAGAGCTAGTACCAAACCAGCTAAACAGCTACTATCACCAACTAGTAGCAGCAGCACAGAAGTCAGAGAAAGTAAAGATTTCAATCTCAAGATTGCCAACAATATGATAGCTCGTGCTGAATCCGTTGGAAAATATCTGAAAGAAGTTGCCAGCTCTCCATTTAAGGATGAATCTTCAGATCTTGTCTCAGTTTCGAAACTTGTCGATAATGCCACAAATTCAATGTCATTTAATAATTACTTCCGGCCAAGTGACTTGCCTAATCAAATGGAACAGAGTGATGAAGAAGGTCTTGTCGCCTCAGGGAGTGCATCAGAAAGCAATAATTCTGGAGCTGAAGAGACACAAAGTACAATAGGACAAGATCAAAAGAAAAAATCAGCATACAGTCTTGCTCCGAATCGAGTATCATGTCCTTACTGCCAGAGAATGTTTCCATGGTCAAGCTCATTGCGTCGGCATATCTTAACACATACTGGACAAAAGCCGTTTAAATGCTCTCATTGCCCTCTCTTATTCACAACGAAAAGTAATTGTGATCGCCATCTGTTGAGAAAACATGGAAATGTTGAATCTGCAGTATCACTATATGTTCCTATTGATGACATTCCAGATCCTGTTCCTGCTCCAAAATGTACCGATGAACAACCTGATCAAACCAAACAAATCAATCCTGTGAATATAAATTTAAACGTTCCAAACGTTAAGCCAGAACCGATGATATCCTCTTCAGACCTGCCATTTAAGTGCCACCTCTGCGATAGTTCGTTTTCCGAACGAATACAATGTTTGGACCACATTAAAGTCCATCATGCTCAAGAGTTTGCTTTACTTCTAGCAAAAGGTGCCATCGATGCTGATGCCGATTACAATCATTCTCAATTAGCCGATGACGATGATCGAAATGATGGTCGCGGAAAATATCCAGACTATGCTAATCGAAAAGTGATTTGTGCATTTTGTGTACGACGATTCTGGTCTACAGAGGATTTGAGACGACATATGCGAACACATTCCGGCGAACGGCCATTTCAGTGTGAAATTTGTCTTAGGAAATTTACCCTAAAGCATAGCATGCTTCGTCACATGAAGAAACACAATGGAAGTCATCATAATAGCCAATCAAATGCAGCAAATAGTGGATCAGATATGTCTGATGATGAACAACCACCATCCAGTATTGTCCTTTCGAACACAATTAGAAGTCATAAAATCCAAGAGATACTAAGTAAAGCAGAAGCATGGAGGAAAACACATTTGAGCGGAGAACAAAAGGAAAACATCGGCTTGCATCCGTTTATAAAATCCGAAGGAAACGGTGAAGATAACAATTCTGATCTCATCGGGAATCTGCTGGGCATCAGTGACCAGGGAATTCTAAACAAACTTTTATCTTCAGCTGATGAAGCAGCAAAACTTTTGGGTGTTGAGAAATAA
Protein Sequence: MIKANNAQHKMDQQMERRSSSTSESSLEPMDLGRTPKKARSNESAVSTFSSSSTIANSLNNDDSDNYESDNDGDYRSSINRITCESHVEIEPSDNPHSLRKKFRISTPNKNNNSLNKNNNNNNNNNNINSSTIYTKLSNDTTQSVSGDRTNNESGFVDTSSHHLNSSPESGTERERDDMKRVCPICEVVSATAHEFTNHIRCHNYSSGDSENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQQRNTAGMIGGGCSIGGGGGGGGSSSISNSGPSSGSSGGGGDGESYESDGCSTDSNASSSNNNNNNNNNNNNYKRKCAGDDNGIIKRRMKTINNNIINENETEPQTGLKYCCPVCNRNDFISMLTLSTHMDREHPNIPAKCRQCEIVFKSHKTLNAHRCAHKVNITQGFKDITFVDFSSEKFPLIAKSLCEQTIRTPITNQKFECPKCYRAFPCASAVDIHIKDCGESPQDYSIRKRATSESSDEENRRDEFFAHLDLQNKSAMSLASSMSSPRTSEKSDIKADPDKSPESNYNKQQESRDLADIQSILNVTSSSSSFIRNFEKCVNTPSSDYSYGKDEEEAQDAFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSSCEDPIKKMHLFSSPELDQDDEHSIPKDRSTPVSHLKEMLQSEKPIKIQVKSLEKLIDTTFSSYDEQEKESLELEENIDSNRPIDLSMDVLDLSKKSKSNPPLAQERIESEAPPEQPKVDIAMIEKNNQILLAQQQLLNEALPKMDPSHYFQLSQLYRNLVFSPLHPFFMQNNLMPPNNINDLNKYGPNMLMNSMFSGSATEPRVNPQNPNNVSSQCKPPPHSQQIQSNVIDNSMLKTIPQNAQILQKSLPPTSSQITIPRHPHLSQPPPQSPLVPPIHQNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHVVRRGSNTASIPQQMSSSSLPPTVPTIPPPHFSAISDQVKYAILAQQLKARKDTDILQQTLSQGNGNNLGNSGNFYSTNSSISNINNNNNKSTINTSVEDDDPKLVIDEDDEDIENNEETEDESKPEDLSKNFENIQGNSVAKKVADSILEQAIRASTKPAKQLLSPTSSSSTEVRESKDFNLKIANNMIARAESVGKYLKEVASSPFKDESSDLVSVSKLVDNATNSMSFNNYFRPSDLPNQMEQSDEEGLVASGSASESNNSGAEETQSTIGQDQKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIDDIPDPVPAPKCTDEQPDQTKQINPVNINLNVPNVKPEPMISSSDLPFKCHLCDSSFSERIQCLDHIKVHHAQEFALLLAKGAIDADADYNHSQLADDDDRNDGRGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGSHHNSQSNAANSGSDMSDDEQPPSSIVLSNTIRSHKIQEILSKAEAWRKTHLSGEQKENIGLHPFIKSEGNGEDNNSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01184049;
90% Identity: iTF_00454029;
80% Identity: -