Basic Information

Insect: Machimus atricapillus
Gene Symbol: RREB1_1
Assembly: GCA_933228755.1
Location: CAKOFS010000074.1:1773922-1779649[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.004 0.74 11.4 0.6 1 21 169 189 169 191 0.96

2 14 0.0012 0.21 13.1 0.1 1 23 201 223 201 223 0.98

3 14 1.5e-05 0.0028 19.0 7.5 1 23 229 251 229 251 0.98

4 14 0.029 5.2 8.7 1.0 2 22 398 418 398 418 0.94

5 14 1 1.9e+02 3.8 0.3 1 20 461 480 461 482 0.76

6 14 0.0061 1.1 10.8 0.1 1 23 616 638 616 638 0.97

7 14 2.1e-05 0.0038 18.6 0.9 1 23 647 669 647 669 0.99

8 14 0.00054 0.099 14.1 2.0 1 23 675 698 675 698 0.97

9 14 0.00062 0.11 13.9 2.1 1 23 1024 1047 1024 1047 0.95

10 14 5.6e-05 0.01 17.2 0.3 2 23 1338 1359 1337 1359 0.97

11 14 0.094 17 7.1 6.3 1 23 1365 1388 1365 1388 0.97

12 14 2.3 4.2e+02 2.7 7.3 1 23 1447 1469 1447 1470 0.95

13 14 0.0055 1 11.0 0.5 3 23 1517 1537 1515 1537 0.96

14 14 0.0009 0.17 13.4 4.8 1 23 1543 1565 1543 1565 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.004	0.74	11.4	0.6	1	21	169	189	169	191	0.96
2	14	0.0012	0.21	13.1	0.1	1	23	201	223	201	223	0.98
3	14	1.5e-05	0.0028	19.0	7.5	1	23	229	251	229	251	0.98
4	14	0.029	5.2	8.7	1.0	2	22	398	418	398	418	0.94
5	14	1	1.9e+02	3.8	0.3	1	20	461	480	461	482	0.76
6	14	0.0061	1.1	10.8	0.1	1	23	616	638	616	638	0.97
7	14	2.1e-05	0.0038	18.6	0.9	1	23	647	669	647	669	0.99
8	14	0.00054	0.099	14.1	2.0	1	23	675	698	675	698	0.97
9	14	0.00062	0.11	13.9	2.1	1	23	1024	1047	1024	1047	0.95
10	14	5.6e-05	0.01	17.2	0.3	2	23	1338	1359	1337	1359	0.97
11	14	0.094	17	7.1	6.3	1	23	1365	1388	1365	1388	0.97
12	14	2.3	4.2e+02	2.7	7.3	1	23	1447	1469	1447	1470	0.95
13	14	0.0055	1	11.0	0.5	3	23	1517	1537	1515	1537	0.96
14	14	0.0009	0.17	13.4	4.8	1	23	1543	1565	1543	1565	0.99

Sequence Information

Coding Sequence: ATGATTAAGACGAGTAATGCACAAATCAAAGTGGAACAGAAGATGGAGAGACGCGCATCATCGACATCCGAGTCGTCGCTAGAGCCGATGGACCTCGGAAGGACCCCTAAAAAATCGACCAGGAACAACGAATCAGCAACGATGTCCCCGGCGAAAACGGATTCAGTGAACAACGATTCAGAGACGTACGAATCAGACAACGACGACTTCGCTAATCGAATCAATTGTGAGAGGCATGTCGAAATCGAACCAAGTGAGAATCCCCATTCGCTACGCAAAAAATTTCGAATcagcacaccgaacaggaacaacaacagcctgaccaaaaataataataataataacaataacaacaataacagtgttgtggcgtacTCGTCTTCGAAGGCTGGCAACGATACGACACAATCGACAAACAACGAATCGGGCTTTGTTGATGCCAGCAGCCATCATTTAAACTCTAGTCCAGAATGCGCTTCGGAACGCGAAAGGGAGGACATGAAATACGTCTGCCCTATTTGCGAGGCAGTCTCAGCTACACCTCATGAATTTACAAATCACATTCGGTGTCACAACTATTCTTCAGGAGACTCTGAGAATTTCACATGCCGCATTTGCTTAAAGGTCCTGTCGTCAGCGTCGTCGCTGGACCGGCATGTGTTAGTCCACACGGGGGAGCGCCCATTCAACTGTAAATATTGCCATTTGACCTTCACGACGAACGGCAACATGCATCGACATATGCGCACCCACAagcagcaccaacagcaacgcaccaatggttcggggggtggtagcgcgggcagtggtgggggagggggcggtagtgggggtggtagcagtggtagcagcagtactagcagcaattgcggcccgagcagcggcagcagtggcgggggcggcgatggcgaaagttatgaaagcgacggttgctcaacggactcaaacgcaagcagctcaaataataacaataataataacaacaacaactacaagagaaagagcactgacgacgacaacggaatcataaagagGCGTATCAAGACGATAAACAACAACATAATCAATGAGAATGAGACGGAGCCGCAAATCGGGCACAAGCTCTTTTGCCCTATGTGCAATCGGAGTGATTTCATAAATATGCTTGCCCTAAGTGGCCACATGGACCGTGAGCACCCAGGCATCCCGCCTAAGTGCAGACAGTGCGAGATCGTCTTCAAGACACCGAGGGCCCTCAATGGGCACAGGTGCACCAGCAAAATGAACGTAACCCAGGGCTTCAGGGACATCGATTTTGTGGACTTTTCCAGCGAAAAGTTCCCACTAATAGCGAAGTCCCTTTGCGAGCAAACGATGCGAACACCGATCACAAGTCAGAAATTCGAGTGCCCCAAATGCTACCGCGCCTTCCCGTGTGCCAGCGCTGTTGATATTCATATTAAAGACTGCGGGGAATCCCCGCAGGATTATTCAATGAGGAAACGTGCCACTAGCGAGAGTTCCGACGAGGAAAATCGACGTGATGAATTTTTTGCTCACTTAGACCTTCAAAACAAGTCTGCTATGAGTTTGGCGAGTTCAATGTCATCGCCCCGAACATCTGAAAAGTCAGAAGTAAAAACCGATCTAGAGAAGAGTCCACAATTCAGCTATAAGCAGCAGGAGTCAAGAGATTTAGCCGATATACAGTCCTTGCTCAATGTTACATCCACGCCCAGCAGTTTTATAAGAAATTTTGAAAATTACGTGAATGCTCCGAGCAGCGAGCACGGCTACGGGAAGGACGAAGAAGAGGCTCAAGATGCTTTCACTTCTGAGTTCCGAAAAATGAAATTGCGTGGGGAGTTCCCCTGTAAACTTTGCTCAGCTGTTTTCCCGAATTTGCGAGCTCTCAAAGGGCACAATCGGATTCATTTAAGCGCAGCTGGGGCTGGACCGTATCGTTGCAACATGTGTCCTTATTCCATTCATGACAAAGCCGCtctaattcgtcacatgcgcactcacaacggtgatagaccttatgaatgtgctgtatgcaaTTACGCTTTCACAACGAAAGCTAACTGCGAAAGGCATCTCAGAAATAGACACGCTAAAACGACTAGGGAGGAGGTGAAACGTGCCATTATTTACCACCCATCAGAGGACTCTAGCTGCGAGGATCCGATTAAGAAAATGCATCTCTTTTCGTCGCCTGAATTTGATCAAGACGAGGAACAATGTGCGCCAAAAGATCGCTCCACACCCTTGTCTCACTTGAAAGAGATGTTGCAGTCAGAGAAGCCTCTCAAGATACAAGTTAAAAGTTTGGAGAAATTAATTGATAAAAATTATAAGAATTACGAAGAGGCTGAGAAAAGATCTGGTGAGCAAGAGGAGAACAATGACTCAAACCGCCCTATAGACCTCAGCATGGATGTCCTTGATCTAAGTAAAAAGGCCAAGCCAAATCCACCCTCTGAGGAGAAAGTGGAGCCTGAACCTCCTTCAGAAGCTACCCCAAAGGTAGATATGTCCACTATAGAGAAAAATAATCAAATTTTGCTGGCTCAACAGCAATTTATCAACGAAGCCCTACCTAAAATGGACCCATCCCAGTACTTCCAGTTGTCGCAACTTTACCGGAACTTTATGTTCTCTCCCTTACATCCATTTTTTCTCCCTAACGGTCTGATGCCAAACAATATAAATGATCTCAATAAATTCACCCCCAATTTACTTATGAACTCAATGTTCAACGGCGACCACAGAGCTGCTCCGCAACCAAGCCCAGCAGCCGTTTCCAGTCAATGCCAGCCATCACCCCACAGTCAGCAAGTTCCGGTCAGCACCATCGAAAATTCCTTGTTAAAAGGAGGTCCTGCGAATGCGCAACTATTGCAAAAGTCTATGCCACCCACATCTCCGCAAATCAACATCCCGCGCCACCCGCATCTGGGTCAGCCCCCTCCCCAGCAACCGACTTTGGTCCCGCCTAGTCAGAACACAGGTCCTGTAAAGATGGTAATCAAAAATGGGGTGCTGATGCCAAAGCAGAAACAGAGGCGGTACAGGACTGAGCGTCCCTTCGCCTGCGAACACTGCTCTGCCCGATTCACTTTGAGATCGAATATGGAGCGTCACATCAAACAGCAGCACCCTCAGTACTGGGCGCAGAGGCAGAGAAGTGGTCACCACATTATGCGAAGAAGCACAAATTCAACAGCTATGCCGCAGATATCATCAAGCACTCTGCCCCCGTCGGTGCCCAGCATCCCAACGACTCATTTCAGTGCAATATCAGATCAAGTTAAGTACGCTATCCTCGCCCAGCAGTTGAAGACCAGAAAGGACACAGACATTTTGCAGCAGACCCTCTCACAGGGGAGTAGCAGTAGTCATGGAAACGGCGGAGTTTTCAACAGTACAAACAACCAGACCAGCAACGTCCACTCAAATGTGGAAGATGATGATCCAAAATTAGTGATAGATGAGGATGAAGAGGTTGAAAATGATGACATTCCTGAGGATGAGACGAAACCTGAGGATTTGTCGAAAAGCACTGATGCACCACCTTCAGAAAATATAGCAGCTAAAAAAGTAGCAGACTCTATCCTAGAACAGGCAATTCGAGCCAGTGCAAACTCAGTCAAGCACTCTTCCTCCCCAAAATGCTCTGAAGAGCGGGATACTAAAGATTTTGGTCTCAAGATTGCGAGCAATATGATTGCCCGGGCAGAATCGGTGGGGAAGTACCTGAAAGAAGTAGCTAGCTCCCCGTTCAAGGACGAATCATCAGACCTAGCATCAGTCTCGAAGCTGGTCGACAACGCTACCAATTCGATGTCTTTCAACAATTACTTCAGGCCAAGTGATTTGCCCAACCAAATGGAGCAAAGTGATGAGGAGGGACTTGTGGCTTCCGGCAGCGCTTCCGAGAGCAATAATTCTGGTACAGAAGAGACTCCTAGTACTATTGGACAAGATCAGAAAAAAAAGTCCGCTTACAGCTTGGCTCCAAATCGAGTTTCTTGCCCATACTGTCAGCGTATGTTCCCCTGGTCAAGCTCCTTGCGGCGCCACATTTTAACTCATACTGGTCAAAAGCCGTTCAAGTGCTCGCACTGTCCACTACTTTTCACGACAAAGAGCAATTGTGACCGGCACCTGCTGAGGAAGCATGGAAACGTGGAATCAGCTGTATCACTATACGTTCCTATTGAAGACATTCCAGACCCTGTTCCTACTCCTAAAGCCGTCGAGGAGCCCGAAAATAAATCTGTAAACTCCTTGAACGTGAACCTCAACGTGCCCAATATTAAGCCAGAGCCGATGATCTCGTCGTCAGATCTTCCGTTCAAGTGCCACCTCTGTGACGGATCATTTTCGGAAAGGATCCACTGTTTGGACCACATCAAAATCCATCACGCTCAAGAATTTGCCTTACTCCTTGCCAAGGGTGCAATCGACGCCGATGCAGACTACAACCATGTCCAAATGGCCGATGACGACGAACGTAACGACGGCCGTGGCAAATACCCCGACTACGCCAATCGGAAGGTGATTTGTGCGTTTTGCGTACGCCGTTTCTGGTCCACTGAAGatctcaggcggcacatgcggacccactccggggagcggcctttccaatgcgatatctgcctcaggaagttcacgctgaagcatagcatgctacgtcacatgaaaaagcacagcgggagccaccacaatagtCAGTCGAACGCAACAAATAGTGGCTCCGACATGTCCGACGACGAGCAGCCCTCCAGCATGATTCTGAGCAATTACCGCACCCACAAGATCCAGGAAATCCTCAGCAAAGCCGAGACTCTAAGGAAGAGTCATCTCAGTGGCGACCAGAAGGAGCTAATCGCCATGCATCCGTTCGTGAAGTCCGAGGGAAATGGCGAGGACAACAACTCGGACCTAATCGGAAATCTACTGGGCATCAGTGACCAGGGCATTCTCAATAAGCTCCTTTCGTCCGCAGACGAGGCGGCCAAGCTGCTGGGCGTCGAGAAGTAA
Protein Sequence: MIKTSNAQIKVEQKMERRASSTSESSLEPMDLGRTPKKSTRNNESATMSPAKTDSVNNDSETYESDNDDFANRINCERHVEIEPSENPHSLRKKFRISTPNRNNNSLTKNNNNNNNNNNNSVVAYSSSKAGNDTTQSTNNESGFVDASSHHLNSSPECASEREREDMKYVCPICEAVSATPHEFTNHIRCHNYSSGDSENFTCRICLKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQQRTNGSGGGSAGSGGGGGGSGGGSSGSSSTSSNCGPSSGSSGGGGDGESYESDGCSTDSNASSSNNNNNNNNNNYKRKSTDDDNGIIKRRIKTINNNIINENETEPQIGHKLFCPMCNRSDFINMLALSGHMDREHPGIPPKCRQCEIVFKTPRALNGHRCTSKMNVTQGFRDIDFVDFSSEKFPLIAKSLCEQTMRTPITSQKFECPKCYRAFPCASAVDIHIKDCGESPQDYSMRKRATSESSDEENRRDEFFAHLDLQNKSAMSLASSMSSPRTSEKSEVKTDLEKSPQFSYKQQESRDLADIQSLLNVTSTPSSFIRNFENYVNAPSSEHGYGKDEEEAQDAFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDPIKKMHLFSSPEFDQDEEQCAPKDRSTPLSHLKEMLQSEKPLKIQVKSLEKLIDKNYKNYEEAEKRSGEQEENNDSNRPIDLSMDVLDLSKKAKPNPPSEEKVEPEPPSEATPKVDMSTIEKNNQILLAQQQFINEALPKMDPSQYFQLSQLYRNFMFSPLHPFFLPNGLMPNNINDLNKFTPNLLMNSMFNGDHRAAPQPSPAAVSSQCQPSPHSQQVPVSTIENSLLKGGPANAQLLQKSMPPTSPQINIPRHPHLGQPPPQQPTLVPPSQNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRRSTNSTAMPQISSSTLPPSVPSIPTTHFSAISDQVKYAILAQQLKTRKDTDILQQTLSQGSSSSHGNGGVFNSTNNQTSNVHSNVEDDDPKLVIDEDEEVENDDIPEDETKPEDLSKSTDAPPSENIAAKKVADSILEQAIRASANSVKHSSSPKCSEERDTKDFGLKIASNMIARAESVGKYLKEVASSPFKDESSDLASVSKLVDNATNSMSFNNYFRPSDLPNQMEQSDEEGLVASGSASESNNSGTEETPSTIGQDQKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDIPDPVPTPKAVEEPENKSVNSLNVNLNVPNIKPEPMISSSDLPFKCHLCDGSFSERIHCLDHIKIHHAQEFALLLAKGAIDADADYNHVQMADDDERNDGRGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGSHHNSQSNATNSGSDMSDDEQPSSMILSNYRTHKIQEILSKAETLRKSHLSGDQKELIAMHPFVKSEGNGEDNNSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01184049;
90% Identity: iTF_01184049;
80% Identity: -