Basic Information

Insect: Phengaris arion
Gene Symbol: L
Assembly: GCA_963565745.1
Location: OY751441.1:9546897-9571988[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.5e-06 0.00019 22.9 1.7 1 23 83 105 83 105 0.99

2 18 0.65 82 5.2 5.8 1 23 111 133 111 133 0.97

3 18 8.8e-06 0.0011 20.5 4.1 1 23 139 161 139 161 0.99

4 18 2.7e-05 0.0034 19.0 0.1 1 23 167 189 167 189 0.98

5 18 3.3e-05 0.0041 18.7 0.2 2 23 205 227 204 227 0.95

6 18 6.2 7.8e+02 2.1 0.1 9 23 258 273 254 273 0.93

7 18 0.31 39 6.2 0.0 3 23 328 348 327 348 0.97

8 18 2.4 3.1e+02 3.4 0.1 3 23 363 383 362 383 0.87

9 18 0.00019 0.024 16.3 1.0 1 23 391 414 391 414 0.94

10 18 0.02 2.6 9.9 0.1 1 23 419 442 419 442 0.93

11 18 0.0017 0.22 13.3 0.3 1 23 502 526 502 527 0.96

12 18 0.00021 0.026 16.2 0.1 2 23 583 604 582 604 0.96

13 18 0.17 22 7.0 0.0 1 23 612 634 612 634 0.97

14 18 8.2 1e+03 1.7 0.4 2 23 642 663 641 664 0.89

15 18 9.4 1.2e+03 1.5 0.0 3 23 671 691 670 691 0.94

16 18 0.48 60 5.6 0.6 1 23 738 760 738 760 0.94

17 18 0.0056 0.7 11.7 0.1 1 20 768 787 768 790 0.95

18 18 0.061 7.7 8.4 0.5 1 23 797 819 797 819 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.5e-06	0.00019	22.9	1.7	1	23	83	105	83	105	0.99
2	18	0.65	82	5.2	5.8	1	23	111	133	111	133	0.97
3	18	8.8e-06	0.0011	20.5	4.1	1	23	139	161	139	161	0.99
4	18	2.7e-05	0.0034	19.0	0.1	1	23	167	189	167	189	0.98
5	18	3.3e-05	0.0041	18.7	0.2	2	23	205	227	204	227	0.95
6	18	6.2	7.8e+02	2.1	0.1	9	23	258	273	254	273	0.93
7	18	0.31	39	6.2	0.0	3	23	328	348	327	348	0.97
8	18	2.4	3.1e+02	3.4	0.1	3	23	363	383	362	383	0.87
9	18	0.00019	0.024	16.3	1.0	1	23	391	414	391	414	0.94
10	18	0.02	2.6	9.9	0.1	1	23	419	442	419	442	0.93
11	18	0.0017	0.22	13.3	0.3	1	23	502	526	502	527	0.96
12	18	0.00021	0.026	16.2	0.1	2	23	583	604	582	604	0.96
13	18	0.17	22	7.0	0.0	1	23	612	634	612	634	0.97
14	18	8.2	1e+03	1.7	0.4	2	23	642	663	641	664	0.89
15	18	9.4	1.2e+03	1.5	0.0	3	23	671	691	670	691	0.94
16	18	0.48	60	5.6	0.6	1	23	738	760	738	760	0.94
17	18	0.0056	0.7	11.7	0.1	1	20	768	787	768	790	0.95
18	18	0.061	7.7	8.4	0.5	1	23	797	819	797	819	0.94

Sequence Information

Coding Sequence: ATGATCATGCTATTTAAAGGAAACAGCAGTAGGCTAGAGCACCTGATCGAGAAGATACAGGCAAACAAGGAAAACCACGATGTCACGGAAGATATCAAAGAAGCGTTGGGCAGCGTGGGCAGTACTGCCGGGAGTTCCTGGCCTTCTTCGACCCCCGAGCCATCGCCCTCGCCAGCGTCGACCCCCACGTCGGCCGACGCGGACGCCGAGCCGCCGTTCACGCTCGGCGCGACTGAACACACGCCCTATCAATGCCAGTTCTGCGATAAGGCCTTCCCGCGACTGTCATACCTAAAGAAGCATGAACAGACCCATTCGGATCAGATGCCATTTCGCTGCGAGTTCTGCTCCCGGCTGTTCAAGCACAAACGGTCCCGGGACAGACACGTCAAGCTGCACACTGGAGACAGGAAATATCGCTGTGCGCATTGTGAATCCGCCTTCTCGAGAAGtgACCACTTGAAGATCCATATGAAGACGCACGACAACCAGAAGCCGTTTCAGTGTACGGTGTGCAACCGCGGGTACAACACGGCGGCCGCGCTGACGTCACACATGCAGGGCCACAAGCGAGACCGGGAGGGGCGGGAGTCTGACAGAAGACGAGCCCTACGCTGCCTGAGATGTGGAGAGGGGTTCAGGAGATCTGATATGCTGCAGGCGCATATGTCCAGTGCTCACGGCTTGGAAACAACATCCATGACTCCTCCACGTAGAGTCGCGTCGCAGCCACCGCCAACTCTACTGGCGTGTATCTACTGCACTAGAGACACTTTCACGAGTATGGAACAATTACAATTACATGTGCGAGCAGCTCACTCTGCAATTTTAAACGGTGAAGCTCCTGCGCAATTTACAGTAGATCAGCCCGCTCCTACGGATCTGAGCAGACGAGGAACCGATGAACCAATCGCTAAGCGTCCACGATCAAGTGCAGGTTCTGTTACCTCAAAAACAACACTTTCTCCAAGTACTCTACTGTGTAATCAATGTGATGCTGCCTTACCAGATTTTGAAGCATTCCGAGCACATTTGAAGGGACATCTTGAAGAAGGAGGCGAATTGAATCGCACGAGCCCAAACCCTTGTATTCATTGTGGAGCGACTTTTGCTGACGCAACAGCTTCTGAGAGACACTTGGCCGCTCATTACCTAGCTGTGTCCTGTGAATACAATTGTCATAGCTGCGCCCGAAGTTTTCCTACGTCCGAAGATCTTCAGAAACATTTACTAGAAATGCATACTCATCACATGTATCGGTGCTCACTTTGCAAAGAAATATTTGAATCGAAAGTTACTATACAGGCTCACTTTGCAATTGCACACAGCGGGGAAAACAAAGTGTGGGTATGTCGTTCATGCGGGAGTGCCGGTGGGGCTCTACGAACGGAGGCAGAAGGCGCGGCCCACGTGCGGGCGAGGCACGCAGCATCTAGGTGCGCTTGTGGGGCGGTGTTACCCGGGGCTAGAGCGCTCAGAGCACACACCGCAGCGCACCACGCCTATCGATGCCCAGTACCGAACTGCACCGATTCATTCGCTGTGCAGTATCTACTTGAAAGGCACATGCAGGCTCACCATGCTGTTGGACAAACGGGTGTAAACGGTGACTTGTCTAGAGTAAACCGAGGTGAAAATAATAATGGACTGGAAGATGACAATTGTTCGCCTCGTATTACCGGGCCTGAAAGCAACGGTCCCGTGTCGATTGATGAGAGGCGACGTAAGAACGGCGCTGTGGCACTGCAGTGCGCTTATTGCGGGGAGCGCACACGCAGTCGCGCAGAATTAGAGGCCCATACGCGCGCCCATTCTGGCACTGCTGCTACTCGCCACAAGTGCCTCATATGCGACGAGATACTTCCCTCTGCTGCGGTACTCGCTGAGCATAAATTGACACATTGTAAGGTAATTGCTGGAGATGTATGCGCACGATGTCGTTCACGACTGCCTTCAGAGGAAGCCTTCCTGAGCCATATGGCACGTCATCACCCTACTTTACCAGCGCCCTGCGTGATATGTCGCCAGACGCTAGCGTCGGAGGGTGAGGCACGATTGCATGCCAGATTCCATTTACGTCCAAACGAGGACGAGCAACGTTGTGCGATTTGTCTCCGAGCGCTTACGGATAGTGAAGCCGGTGACGGCGCAAGAGCTTGCTCATCGTGTTATGCTCGACACGCAACCCCCAGACCGCCGCCTCCAGCAGACCACGACTGTCGATTGTGCCGTAGAACTTTAGGCTCACCGACCCGATTACAAGCCCATCTCATTGAGCATACGTTTGCTGGGATTGGAGCATTCACATGTTATTTGTGCTCAGCTATGTTCACTAGTGCCGCTGGTCTACAACGACATCTACCAGAGCACGCAGCGGCTCCGAGACCTTATGATTGTAGTCGATGCGGGCTAAAGTTTTTCTTCCGAGCCGAACTAGACAACCACGCCTTTGTGCATTTGGAAGAGGCTGAAATTGCTCAAAGAGCGTTCTATGAGGCTTACGCCCGTGGTGCGGTTTCTGCGTGGGCAGCTTTACAACCTCCAGAACCTACGCCACACCCACCAGTGACATCACCTTCGCAACCCACAGAGGTTCCGGTGAAACAAGAACCAGATATAAAGGAGGAACGCCTAGATGAATACATAGAAGTTTCTTCGCCGCCTCCGCCTCTAGAAACACCAGCAAGCTCGAAGCCTGTCGTAAAACAGGAGAAGCCTGATGAAGAATGA
Protein Sequence: MIMLFKGNSSRLEHLIEKIQANKENHDVTEDIKEALGSVGSTAGSSWPSSTPEPSPSPASTPTSADADAEPPFTLGATEHTPYQCQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDREGRESDRRRALRCLRCGEGFRRSDMLQAHMSSAHGLETTSMTPPRRVASQPPPTLLACIYCTRDTFTSMEQLQLHVRAAHSAILNGEAPAQFTVDQPAPTDLSRRGTDEPIAKRPRSSAGSVTSKTTLSPSTLLCNQCDAALPDFEAFRAHLKGHLEEGGELNRTSPNPCIHCGATFADATASERHLAAHYLAVSCEYNCHSCARSFPTSEDLQKHLLEMHTHHMYRCSLCKEIFESKVTIQAHFAIAHSGENKVWVCRSCGSAGGALRTEAEGAAHVRARHAASRCACGAVLPGARALRAHTAAHHAYRCPVPNCTDSFAVQYLLERHMQAHHAVGQTGVNGDLSRVNRGENNNGLEDDNCSPRITGPESNGPVSIDERRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGTAATRHKCLICDEILPSAAVLAEHKLTHCKVIAGDVCARCRSRLPSEEAFLSHMARHHPTLPAPCVICRQTLASEGEARLHARFHLRPNEDEQRCAICLRALTDSEAGDGARACSSCYARHATPRPPPPADHDCRLCRRTLGSPTRLQAHLIEHTFAGIGAFTCYLCSAMFTSAAGLQRHLPEHAAAPRPYDCSRCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAVSAWAALQPPEPTPHPPVTSPSQPTEVPVKQEPDIKEERLDEYIEVSSPPPPLETPASSKPVVKQEKPDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01437318;
90% Identity: iTF_00744993; iTF_00289049; iTF_00787013; iTF_00926011; iTF_00688039; iTF_00262052; iTF_00406096; iTF_01217693; iTF_00935047; iTF_00404057; iTF_01248411; iTF_00164604; iTF_00934077;
80% Identity: -