Pfla017811.1
Basic Information
- Insect
- Perizoma flavofasciatum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_958496245.1
- Location
- OY292441.1:6951323-6952940[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 1.5e-11 44.2 0.0 1 38 85 123 85 128 0.94 2 2 1e-18 8.1e-16 57.8 0.0 1 43 291 334 291 336 0.95
Sequence Information
- Coding Sequence
- ATGCTGACGACCCTTGGTGGGATGAAACGAGGGTCTACAGAAGGTCTACGGAAGATCTACGCCAGATCTTACGTCGAAGACTTTAGTCTAAATGCAATCAATGTCTGTGTAATAAAGCAAGCTATATTAGTTGTAAAATCATTTGTCTTTCCCATAGACGTAGTATTTTCACGGAAAGATTCAATGTTCATCGCTAGATTGAAACGCGCTGCCCTAGACGGACCCTGTAATAGTACAACAAAGCGTAACTACACAGAAGATGAGCTGCAGTCAGCCCTTCGAGACATCCAGACCGGAAGACTCGGCACCAGACGGGCAGCCGTCGTTTACGGCATCCCAAGATCCACGCTCCGAAATAAGGTCAACAAGTTTGGGCTTACACCGGAACAGCACGAGTCAGAGCCGGATAGCGACCCGGAACGGACTGACTCACCACCATCGGTGATACTAAAAATCCCGACATTCCCCCCACCGGACGACAAAAGCTCTTCGCCAGCCACACCAGTGACTCCAATCACGCCTATGACTCCAACTTTCAAGGCCTCTCACAACGCTTGCCAAACACCTCTCCTCCTCCCTCCATCAGTTTTTGCTGATCCACCTACCCAACACCTATTCACGTCACTCAGCGACGTCATAGCGAAAAGCATTAGCCAAAAGTTCCAGCAGCCCTTAGATAGATCGCAATCGGACATGCAGCACTATATGCGAGCTCCGGACAGACACGTTTCAGTCATCAAAACCCCTCCTGATAACCATCAGAGGAACTACCAGATGCCGAGCAATTCCCGTGGGGTTTCCAACAATAACGGCCAAGCGGCCGCGGGGGGAAAAGGAACGCGACCCAAGCGAGGGAAGTACAGGAACTACGATAGAGACAGTTTGGTAGAAGCTGTTAAGGCAGTTCAGAGAGGTGAAATGTCGGTTCACCGTGCTGGCTCGTACTACGGAGTACCGCATTCCACGCTTGAGTATAAGGTAAAGGAGCGTCACTTGATGCGGCCGCGGAAACGTGAACCGAAACCCCAACCTGACCAGAAACCTCAGCCTCCGAAGCCGCAACAACCTAAACCGGCGACAAAACCCTTCTCTAACGGACTGAACGGTCCTGAAACAGGAGGCTACCCCCCAGGGTATCCCTTTTGGCCTGGAGCTAGCTTCGCGCCGCACCCAGCACCTGATCTATACGCGTCCCATATGATGCGGCGATTGCGTGAAGAGGCGCCTCCTCCAGCAAACGGATCCTTCCTCGAAGGTATCATTAGGTCTAGCTTGGAGCGGCCAGGAGTAGCGCTTTTGCAGCGATTGACGGCAGAACCGCGCGTGCCTGGCATTCCCCAAGATTCACCGAGTCTGCTGAGGAGGTTGGCAGGGACCTCGTCTCCAGAAGACGGGCCGCCCGCTAGACGACCGCGCTTGGACAGTTCTGATAGGCAACTGGCAGCGGAGATGCGTGAAGCAGTGCAGCGGCTGCGTGCGGATAAACTCCGGCCACGGAACGGTACCCCCACGCCACCGTTGTCCCCCCCACCGGCGCCCCCGGCCCCCCCAGACCGCGCTTAG
- Protein Sequence
- MLTTLGGMKRGSTEGLRKIYARSYVEDFSLNAINVCVIKQAILVVKSFVFPIDVVFSRKDSMFIARLKRAALDGPCNSTTKRNYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTPEQHESEPDSDPERTDSPPSVILKIPTFPPPDDKSSSPATPVTPITPMTPTFKASHNACQTPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRSQSDMQHYMRAPDRHVSVIKTPPDNHQRNYQMPSNSRGVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDQKPQPPKPQQPKPATKPFSNGLNGPETGGYPPGYPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGVALLQRLTAEPRVPGIPQDSPSLLRRLAGTSSPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663005;
- 90% Identity
- iTF_00119528; iTF_01428974; iTF_00632680; iTF_00686255; iTF_01161236; iTF_00696406; iTF_00700017; iTF_00703857; iTF_01219705; iTF_01099770; iTF_00663005; iTF_00377022;
- 80% Identity
- -