Prub020659.1
Basic Information
- Insect
- Plemyria rubiginata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963576535.1
- Location
- OY754930.1:2280160-2286601[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-15 3e-12 46.5 0.0 1 42 68 110 68 113 0.92 2 2 5.9e-19 8.3e-16 57.9 0.0 1 43 275 318 275 320 0.95
Sequence Information
- Coding Sequence
- ATGAGACCTTCCTCCAACAGGGTAGTGGACGACAAAGCCGCCCCCTCGTCCCCACTCCTGGCGGAACAGCCCCTGGACCTGAGTGCCAAGTCCACCTCCAGCACCAGCGGCACCCCGCCACCTGATGCCAAGAATCTGGACAACAGATTGCGACGTGCAGCCCTTGACGGAGCCGGCAACAGCACAACCAAGAGGAACTACACAGAGGACGAGCTCCAGCTGGCTCTCCGCGACATCCAGACCGGCCGGCTCGGCACCAGGCGCGCGGCCGTCGTCTACGGCATCCCACGGTCCACGCTTCGAAACAAAGTCAACAAGTTCGGCCTCACCCTAGACCAGCACGAGTCGGAACCTGACAGTGACCAGGAGCGAACCGAATCCCCACCGTCGGTGATCCTCAAAATCCCGACCTTCCCCCCACCGGACGACAAAAGCCCTTCGCCGGCGACTCCAGTGACGACGCCCGTAACTCCTATGACTCCTAATTTCCAACCTCACAATCCGACTTGCCAAACGTCGCTACGCCTCCCACCGTCCGTGTTCGCCGACCCGCCGACCCAACACCTCTTCACGTCGCTCAGCGACGTCATAGCGAAGAGCATCAGCCAAAAGTTCCAGCAGCCGTTGGACAGGCCCCAAGTGGACATGCAGCAGTACATGCGCGCTCCCGAAAGACACGTGTCCGTCATCAAAACCCCTCCCGATAACCATCACAGAAACTACCAAATGCCGAGCAATTCTCGGGGAGTTTCCAACAACAACGGCCAAGCGGCTGCAGGCGGTAAGGGAACGCGCCCCAAGCGAGGGAAATACAGGAACTACGACCGGGACAGTCTCGTCGAAGCCGTCAAGGCGGTCCAGAGGGGTGAGATGTCCGTGCACAGAGCCGGCTCGTACTATGGAGTGCCGCATTCGACGCTCGAATACAAGGTGAAAGAGCGTCATCTCATGCGTCCGCGGAAACGCGAGCCCAAGCCTCAGCCCGACGTGAAGCCGCAGCCTCCGAAGCCGCAACCTCCGAAGCCGGCGACGAAGCCCTTCTCGAACGGGCTGAACGGTCCCGAGACCGGAGGCTACCCGCCAGGGTACCCGTTCTGGCCGGGCGCGAGCTTCGCCCCTCACCCGGCGCCGGATCTGTACGCGTCGCACATGATGCGCCGGCTGCGCGAGGAGGCGCCTCCGCCGGCGAACGGCTCCTTCCTGGAAGGCATCATCAGGTCGAGCCTGGAGCGGCCGGGTGCGGCGCTGCTGCAGAGGCTGACgggcgcgccggcgccgcaggACTCGCCGAGCTTGCTGCGGCGGCTGGCGGGCGGCGCGTCGCCGGAGGAGGGCCCGCCGGCGCGCCGGCCGCGGCTCGACAGCTCGGACCGGCAGCTGGCAGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGGACCCCGACACCGCCGCtgtcgccgccgccggcgccgcccgcgccccccgACCGCGTCTAG
- Protein Sequence
- MRPSSNRVVDDKAAPSSPLLAEQPLDLSAKSTSSTSGTPPPDAKNLDNRLRRAALDGAGNSTTKRNYTEDELQLALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTLDQHESEPDSDQERTESPPSVILKIPTFPPPDDKSPSPATPVTTPVTPMTPNFQPHNPTCQTSLRLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRPQVDMQQYMRAPERHVSVIKTPPDNHHRNYQMPSNSRGVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPATKPFSNGLNGPETGGYPPGYPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGAPAPQDSPSLLRRLAGGASPEEGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663005;
- 90% Identity
- iTF_01171387;
- 80% Identity
- -