Ader018209.1
Basic Information
- Insect
- Anticlea derivata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947579855.1
- Location
- OX388279.1:2356508-2363014[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-14 1.2e-11 44.2 0.0 1 38 69 107 69 111 0.94 2 2 6.6e-19 6.5e-16 57.9 0.0 1 43 275 318 275 320 0.95
Sequence Information
- Coding Sequence
- ATGTCCACTTCTTTCTTCAGCAGGCAGGCGGAAGACAAGGCAGCCCCCTCGTCGCCACTCCTGGCGGAACAGCCCCTGGACCTGAGCGCCAAGTCTACATCCAGCACTAGTGGTACCCCGCCACCTGACGCCAAGAACTCGGATAATAGATTAAAACGCGCAGCCCTAGAGGGCGCCGGCAACAGTACAACCAAACGTAACTATACAGAAGACGAGCTCCAATCGGCTCTCCGTGACATCCAGACCGGCAGGCTCGGCACGAGACGCGCAGCCGTCGTCTACGGCATCCCAAGATCCACCCTCCGAAATAAGGTCAATAAGTTCGGTCTCACCCCGGATCAGCACGAATCAGAACCGGACAGTGACCAGGAGAGAACGGATTCCCCACCGTCGGTGATACTAAAGATCCCGACCTTCCCCCCACCAGACGAAAAAAGCCCATCACCGGCTACCCCAGTGACTACTCCCATAACGCCTATGACACCGAACTTCCAATCCCACAATGCTTGCCAAACGCCTCTACTCCTCCCGCCTTCAGTCTTCGCCGATCCACCGACCCAGCACCTTTTCACCTCCCTCAGTGATGTGATAGCGAAGAGCATCAGCCAGAAGTTCCAGCAGCCGTTAGATAGGTCGCAAGCCGAGATGCAGCAATACATGCGAGCACCGGACCGACACGTCTCTGTCATCAAAACACCTCCTGATAACCATCATAGGAACTACCAAATGCCGAGCAATTCTCGAGGTGTCTCTAACAATAATGGGCAAGCGGCTGCAGGTGGGAAAGGAACTCGTCCCAAGCGAGGAAAATATAGAAACTACGATAGAGACAGTTTGGTGGAAGCTGTGAAGGCGGTTCAGAGAGGGGAGATGTCGGTTCACAGAGCTGGGTCGTATTATGGAGTACCGCATTCGACGCTTGAGTATAAAGTGAAAGAGCGTCATCTAATGCGTCCGCGGAAACGCGAGCCCAAACCTCAGCCTGACGTGAAGCCGCAACCTCCGAAGCCACAGCCCCCTAAGCCTGCGACGAAACCCTTCTCGAACGGACTCAACGGGCCTGAAACTGGAGGCTACCCTCCAGGATATCCGTTCTGGCCGGGGGCGAGCTTTGCGCCGCACCCCGCTCCGGATCTATACGCGTCTCATATGATGCGCAGATTGCGCGAAGAGGCTCCCCCGCCTGCGAACGGATCCTTCCTTGAAGGGATAATCCGGTCTAGCCTGGAACGACCCGGAGCAGCGCTGTTGCAGCGACTGACGGCCGAACCGAGGGTGCCTGGAATTCCCCAAGACTCCCCGAGTTTGTTGCGGAGGTTGGCAGGGACCGCGTCGCCCGAAGACGGGCCTCCGGCTAGACGACCGCGCTTGGACAGCTCAGATAGACAACTGGCGGCGGAGATGCGCGAGGCCGTCCAGCGACTGCGCGCGGACAAGCTCCGGCCTCGCAACGGGACCCCCACTCCGCCCCTCTCCCCCCCACCGGCGCCGCCGGCCCCCCCGGACCGCGCCTAG
- Protein Sequence
- MSTSFFSRQAEDKAAPSSPLLAEQPLDLSAKSTSSTSGTPPPDAKNSDNRLKRAALEGAGNSTTKRNYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTPDQHESEPDSDQERTDSPPSVILKIPTFPPPDEKSPSPATPVTTPITPMTPNFQSHNACQTPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRSQAEMQQYMRAPDRHVSVIKTPPDNHHRNYQMPSNSRGVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPATKPFSNGLNGPETGGYPPGYPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRVPGIPQDSPSLLRRLAGTASPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663005;
- 90% Identity
- iTF_01171387;
- 80% Identity
- -